Retinoic acid receptor gamma: Difference between revisions

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{{Infobox gene}}
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<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
'''Retinoic acid receptor gamma''' ('''RAR-γ'''), also known as '''NR1B3''' (nuclear receptor subfamily 1, group B, member 3) is a [[nuclear receptor]] encoded by the ''RARG'' [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: RARG retinoic acid receptor, gamma| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=5916| accessdate = }}</ref><ref name="pmid1849262">{{cite journal | vauthors = Lehmann JM, Hoffmann B, Pfahl M | title = Genomic organization of the retinoic acid receptor gamma gene | journal = Nucleic Acids Research | volume = 19 | issue = 3 | pages = 573–8 | date = Feb 1991 | pmid = 1849262 | pmc = 333650 | doi = 10.1093/nar/19.3.573 }}</ref>
{{GNF_Protein_box
| image = PBB_Protein_RARG_image.jpg
| image_source = [[Protein_Data_Bank|PDB]] rendering based on 1dsz.
| PDB = {{PDB2|1dsz}}, {{PDB2|1exa}}, {{PDB2|1exx}}, {{PDB2|1fcx}}, {{PDB2|1fcy}}, {{PDB2|1fcz}}, {{PDB2|1fd0}}, {{PDB2|1hra}}, {{PDB2|2lbd}}, {{PDB2|3lbd}}, {{PDB2|4lbd}}
| Name = Retinoic acid receptor, gamma
| HGNCid = 9866
| Symbol = RARG
| AltSymbols =; NR1B3; RARC
| OMIM = 180190
| ECnumber = 
| Homologene = 20263
| MGIid = 97858
| Function = {{GNF_GO|id=GO:0003700 |text = transcription factor activity}} {{GNF_GO|id=GO:0003707 |text = steroid hormone receptor activity}} {{GNF_GO|id=GO:0003708 |text = retinoic acid receptor activity}} {{GNF_GO|id=GO:0005515 |text = protein binding}} {{GNF_GO|id=GO:0008270 |text = zinc ion binding}} {{GNF_GO|id=GO:0043565 |text = sequence-specific DNA binding}} {{GNF_GO|id=GO:0046872 |text = metal ion binding}}
| Component = {{GNF_GO|id=GO:0005634 |text = nucleus}} {{GNF_GO|id=GO:0005667 |text = transcription factor complex}}
| Process = {{GNF_GO|id=GO:0006350 |text = transcription}} {{GNF_GO|id=GO:0006355 |text = regulation of transcription, DNA-dependent}} {{GNF_GO|id=GO:0007275 |text = multicellular organismal development}} {{GNF_GO|id=GO:0043065 |text = positive regulation of apoptosis}} {{GNF_GO|id=GO:0045944 |text = positive regulation of transcription from RNA polymerase II promoter}} {{GNF_GO|id=GO:0048048 |text = embryonic eye morphogenesis}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 5916
    | Hs_Ensembl = 
    | Hs_RefseqProtein = XP_945931
    | Hs_RefseqmRNA = XM_940838
    | Hs_GenLoc_db = 
    | Hs_GenLoc_chr = 
    | Hs_GenLoc_start = 
    | Hs_GenLoc_end = 
    | Hs_Uniprot = 
    | Mm_EntrezGene = 19411
    | Mm_Ensembl = ENSMUSG00000001288
    | Mm_RefseqmRNA = NM_001042727
    | Mm_RefseqProtein = NP_001036192
    | Mm_GenLoc_db = 
    | Mm_GenLoc_chr = 15
    | Mm_GenLoc_start = 102062974
    | Mm_GenLoc_end = 102085313
    | Mm_Uniprot = Q3UG86
  }}
}}
'''Retinoic acid receptor gamma''' ('''RAR-gamma'''), also known as '''NR1B3''' (nuclear receptor subfamily 1, group B, member 3) is a [[nuclear receptor]] encoded by the {{gene|RARG}} gene.<ref name="entrez">{{cite web | title = Entrez Gene: RARG retinoic acid receptor, gamma| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=5916| accessdate = }}</ref>


<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
== Interactions ==
{{PBB_Summary
| section_title =  
| summary_text =  
}}


==See also==
Retinoic acid receptor gamma has been shown to [[Protein-protein_interaction|interact]] with [[nuclear receptor co-repressor 1|NCOR1]].<ref name="pmid10336495">{{cite journal | vauthors = Dowell P, Ishmael JE, Avram D, Peterson VJ, Nevrivy DJ, Leid M | title = Identification of nuclear receptor corepressor as a peroxisome proliferator-activated receptor alpha interacting protein | journal = The Journal of Biological Chemistry | volume = 274 | issue = 22 | pages = 15901–7 | date = May 1999 | pmid = 10336495 | doi = 10.1074/jbc.274.22.15901 }}</ref>
 
== See also ==
* [[Retinoic acid receptor]]
* [[Retinoic acid receptor]]


==References==
== References ==
{{reflist|2}}
{{reflist}}


==Further reading==
== Further reading ==
{{refbegin | 2}}
{{refbegin | 2}}
{{PBB_Further_reading
* {{cite journal | vauthors = Leid M, Kastner P, Lyons R, Nakshatri H, Saunders M, Zacharewski T, Chen JY, Staub A, Garnier JM, Mader S | title = Purification, cloning, and RXR identity of the HeLa cell factor with which RAR or TR heterodimerizes to bind target sequences efficiently | journal = Cell | volume = 68 | issue = 2 | pages = 377–95 | date = Jan 1992 | pmid = 1310259 | doi = 10.1016/0092-8674(92)90478-U }}
| citations =
* {{cite journal | vauthors = Vollberg TM, Nervi C, George MD, Fujimoto W, Krust A, Jetten AM | title = Retinoic acid receptors as regulators of human epidermal keratinocyte differentiation | journal = Molecular Endocrinology | volume = 6 | issue = 5 | pages = 667–76 | date = May 1992 | pmid = 1318502 | doi = 10.1210/me.6.5.667 }}
*{{cite journal | author=Leid M, Kastner P, Lyons R, ''et al.'' |title=Purification, cloning, and RXR identity of the HeLa cell factor with which RAR or TR heterodimerizes to bind target sequences efficiently. |journal=Cell |volume=68 |issue= 2 |pages= 377-95 |year= 1992 |pmid= 1310259 |doi= }}
* {{cite journal | vauthors = Lehmann JM, Zhang XK, Pfahl M | title = RAR gamma 2 expression is regulated through a retinoic acid response element embedded in Sp1 sites | journal = Molecular and Cellular Biology | volume = 12 | issue = 7 | pages = 2976–85 | date = Jul 1992 | pmid = 1320193 | pmc = 364511 | doi =  10.1128/mcb.12.7.2976}}
*{{cite journal | author=Vollberg TM, Nervi C, George MD, ''et al.'' |title=Retinoic acid receptors as regulators of human epidermal keratinocyte differentiation. |journal=Mol. Endocrinol. |volume=6 |issue= 5 |pages= 667-76 |year= 1992 |pmid= 1318502 |doi= }}
* {{cite journal | vauthors = Mattei MG, Rivière M, Krust A, Ingvarsson S, Vennström B, Islam MQ, Levan G, Kautner P, Zelent A, Chambon P | title = Chromosomal assignment of retinoic acid receptor (RAR) genes in the human, mouse, and rat genomes | journal = Genomics | volume = 10 | issue = 4 | pages = 1061–9 | date = Aug 1991 | pmid = 1655630 | doi = 10.1016/0888-7543(91)90199-O }}
*{{cite journal | author=Lehmann JM, Zhang XK, Pfahl M |title=RAR gamma 2 expression is regulated through a retinoic acid response element embedded in Sp1 sites. |journal=Mol. Cell. Biol. |volume=12 |issue= 7 |pages= 2976-85 |year= 1992 |pmid= 1320193 |doi=  }}
* {{cite journal | vauthors = Kastner P, Krust A, Mendelsohn C, Garnier JM, Zelent A, Leroy P, Staub A, Chambon P | title = Murine isoforms of retinoic acid receptor gamma with specific patterns of expression | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 87 | issue = 7 | pages = 2700–4 | date = Apr 1990 | pmid = 2157210 | pmc = 53758 | doi = 10.1073/pnas.87.7.2700 }}
*{{cite journal | author=Mattei MG, Rivière M, Krust A, ''et al.'' |title=Chromosomal assignment of retinoic acid receptor (RAR) genes in the human, mouse, and rat genomes. |journal=Genomics |volume=10 |issue= 4 |pages= 1061-9 |year= 1991 |pmid= 1655630 |doi= }}
* {{cite journal | vauthors = Giguère V, Shago M, Zirngibl R, Tate P, Rossant J, Varmuza S | title = Identification of a novel isoform of the retinoic acid receptor gamma expressed in the mouse embryo | journal = Molecular and Cellular Biology | volume = 10 | issue = 5 | pages = 2335–40 | date = May 1990 | pmid = 2157970 | pmc = 360581 | doi =  10.1128/mcb.10.5.2335}}
*{{cite journal | author=Lehmann JM, Hoffmann B, Pfahl M |title=Genomic organization of the retinoic acid receptor gamma gene. |journal=Nucleic Acids Res. |volume=19 |issue= 3 |pages= 573-8 |year= 1991 |pmid= 1849262 |doi= }}
* {{cite journal | vauthors = Ishikawa T, Umesono K, Mangelsdorf DJ, Aburatani H, Stanger BZ, Shibasaki Y, Imawari M, Evans RM, Takaku F | title = A functional retinoic acid receptor encoded by the gene on human chromosome 12 | journal = Molecular Endocrinology | volume = 4 | issue = 6 | pages = 837–44 | date = Jun 1990 | pmid = 2172793 | doi = 10.1210/mend-4-6-837 }}
*{{cite journal | author=Kastner P, Krust A, Mendelsohn C, ''et al.'' |title=Murine isoforms of retinoic acid receptor gamma with specific patterns of expression. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=87 |issue= 7 |pages= 2700-4 |year= 1990 |pmid= 2157210 |doi=  }}
* {{cite journal | vauthors = Krust A, Kastner P, Petkovich M, Zelent A, Chambon P | title = A third human retinoic acid receptor, hRAR-gamma | journal = Proceedings of the National Academy of Sciences of the United States of America | volume = 86 | issue = 14 | pages = 5310–4 | date = Jul 1989 | pmid = 2546152 | pmc = 297611 | doi = 10.1073/pnas.86.14.5310 }}
*{{cite journal | author=Giguère V, Shago M, Zirngibl R, ''et al.'' |title=Identification of a novel isoform of the retinoic acid receptor gamma expressed in the mouse embryo. |journal=Mol. Cell. Biol. |volume=10 |issue= 5 |pages= 2335-40 |year= 1990 |pmid= 2157970 |doi= }}
* {{cite journal | vauthors = Renaud JP, Rochel N, Ruff M, Vivat V, Chambon P, Gronemeyer H, Moras D | title = Crystal structure of the RAR-gamma ligand-binding domain bound to all-trans retinoic acid | journal = Nature | volume = 378 | issue = 6558 | pages = 681–9 | date = Dec 1995 | pmid = 7501014 | doi = 10.1038/378681a0 }}
*{{cite journal | author=Ishikawa T, Umesono K, Mangelsdorf DJ, ''et al.'' |title=A functional retinoic acid receptor encoded by the gene on human chromosome 12. |journal=Mol. Endocrinol. |volume=4 |issue= 6 |pages= 837-44 |year= 1990 |pmid= 2172793 |doi= }}
* {{cite journal | vauthors = Zhou L, Pang J, Munroe DG, Lau C | title = A human retinoic acid receptor gamma isoform is homologous to the murine retinoic acid receptor gamma 7 | journal = Nucleic Acids Research | volume = 21 | issue = 10 | pages = 2520 | date = May 1993 | pmid = 7685085 | pmc = 309563 | doi = 10.1093/nar/21.10.2520 }}
*{{cite journal | author=Krust A, Kastner P, Petkovich M, ''et al.'' |title=A third human retinoic acid receptor, hRAR-gamma. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=86 |issue= 14 |pages= 5310-4 |year= 1989 |pmid= 2546152 |doi= }}
* {{cite journal | vauthors = Zitnik RJ, Kotloff RM, Latifpour J, Zheng T, Whiting NL, Schwalb J, Elias JA | title = Retinoic acid inhibition of IL-1-induced IL-6 production by human lung fibroblasts | journal = Journal of Immunology | volume = 152 | issue = 3 | pages = 1419–27 | date = Feb 1994 | pmid = 8301142 | doi =  }}
*{{cite journal | author=Renaud JP, Rochel N, Ruff M, ''et al.'' |title=Crystal structure of the RAR-gamma ligand-binding domain bound to all-trans retinoic acid. |journal=Nature |volume=378 |issue= 6558 |pages= 681-9 |year= 1996 |pmid= 7501014 |doi= 10.1038/378681a0 }}
* {{cite journal | vauthors = Botling J, Castro DS, Oberg F, Nilsson K, Perlmann T | title = Retinoic acid receptor/retinoid X receptor heterodimers can be activated through both subunits providing a basis for synergistic transactivation and cellular differentiation | journal = The Journal of Biological Chemistry | volume = 272 | issue = 14 | pages = 9443–9 | date = Apr 1997 | pmid = 9083083 | doi = 10.1074/jbc.272.14.9443 }}
*{{cite journal | author=Zhou L, Pang J, Munroe DG, Lau C |title=A human retinoic acid receptor gamma isoform is homologous to the murine retinoic acid receptor gamma 7. |journal=Nucleic Acids Res. |volume=21 |issue= 10 |pages= 2520 |year= 1993 |pmid= 7685085 |doi=  }}
* {{cite journal | vauthors = Lømo J, Smeland EB, Ulven S, Natarajan V, Blomhoff R, Gandhi U, Dawson MI, Blomhoff HK | title = RAR-, not RXR, ligands inhibit cell activation and prevent apoptosis in B-lymphocytes | journal = Journal of Cellular Physiology | volume = 175 | issue = 1 | pages = 68–77 | date = Apr 1998 | pmid = 9491782 | doi = 10.1002/(SICI)1097-4652(199804)175:1<68::AID-JCP8>3.0.CO;2-A }}
*{{cite journal | author=Zitnik RJ, Kotloff RM, Latifpour J, ''et al.'' |title=Retinoic acid inhibition of IL-1-induced IL-6 production by human lung fibroblasts. |journal=J. Immunol. |volume=152 |issue= 3 |pages= 1419-27 |year= 1994 |pmid= 8301142 |doi= }}
* {{cite journal | vauthors = Klaholz BP, Renaud JP, Mitschler A, Zusi C, Chambon P, Gronemeyer H, Moras D | title = Conformational adaptation of agonists to the human nuclear receptor RAR gamma | journal = Nature Structural Biology | volume = 5 | issue = 3 | pages = 199–202 | date = Mar 1998 | pmid = 9501913 | doi = 10.1038/nsb0398-199 }}
*{{cite journal | author=Botling J, Castro DS, Oberg F, ''et al.'' |title=Retinoic acid receptor/retinoid X receptor heterodimers can be activated through both subunits providing a basis for synergistic transactivation and cellular differentiation. |journal=J. Biol. Chem. |volume=272 |issue= 14 |pages= 9443-9 |year= 1997 |pmid= 9083083 |doi= }}
* {{cite journal | vauthors = Zhang ZP, Gambone CJ, Gabriel JL, Wolfgang CL, Soprano KJ, Soprano DR | title = Arg278, but not Lys229 or Lys236, plays an important role in the binding of retinoic acid by retinoic acid receptor gamma | journal = The Journal of Biological Chemistry | volume = 273 | issue = 51 | pages = 34016–21 | date = Dec 1998 | pmid = 9852056 | doi = 10.1074/jbc.273.51.34016 }}
*{{cite journal  | author=Lømo J, Smeland EB, Ulven S, ''et al.'' |title=RAR-, not RXR, ligands inhibit cell activation and prevent apoptosis in B-lymphocytes. |journal=J. Cell. Physiol. |volume=175 |issue= 1 |pages= 68-77 |year= 1998 |pmid= 9491782 |doi= 10.1002/(SICI)1097-4652(199804)175:1<68::AID-JCP8>3.0.CO;2-A }}
* {{cite journal | vauthors = Yang C, Zhou D, Chen S | title = Modulation of aromatase expression in the breast tissue by ERR alpha-1 orphan receptor | journal = Cancer Research | volume = 58 | issue = 24 | pages = 5695–700 | date = Dec 1998 | pmid = 9865725 | doi =  }}
*{{cite journal | author=Klaholz BP, Renaud JP, Mitschler A, ''et al.'' |title=Conformational adaptation of agonists to the human nuclear receptor RAR gamma. |journal=Nat. Struct. Biol. |volume=5 |issue= 3 |pages= 199-202 |year= 1998 |pmid= 9501913 |doi= }}
* {{cite journal | vauthors = Nagpal S, Ghosn C, DiSepio D, Molina Y, Sutter M, Klein ES, Chandraratna RA | title = Retinoid-dependent recruitment of a histone H1 displacement activity by retinoic acid receptor | journal = The Journal of Biological Chemistry | volume = 274 | issue = 32 | pages = 22563–8 | date = Aug 1999 | pmid = 10428834 | doi = 10.1074/jbc.274.32.22563 }}
*{{cite journal | author=Zhang ZP, Gambone CJ, Gabriel JL, ''et al.'' |title=Arg278, but not Lys229 or Lys236, plays an important role in the binding of retinoic acid by retinoic acid receptor gamma. |journal=J. Biol. Chem. |volume=273 |issue= 51 |pages= 34016-21 |year= 1999 |pmid= 9852056 |doi=  }}
* {{cite journal | vauthors = Egea PF, Mitschler A, Rochel N, Ruff M, Chambon P, Moras D | title = Crystal structure of the human RXRalpha ligand-binding domain bound to its natural ligand: 9-cis retinoic acid | journal = The EMBO Journal | volume = 19 | issue = 11 | pages = 2592–601 | date = Jun 2000 | pmid = 10835357 | pmc = 212755 | doi = 10.1093/emboj/19.11.2592 }}
*{{cite journal | author=Yang C, Zhou D, Chen S |title=Modulation of aromatase expression in the breast tissue by ERR alpha-1 orphan receptor. |journal=Cancer Res. |volume=58 |issue= 24 |pages= 5695-700 |year= 1999 |pmid= 9865725 |doi= }}
* {{cite journal | vauthors = Boudjelal M, Voorhees JJ, Fisher GJ | title = Retinoid signaling is attenuated by proteasome-mediated degradation of retinoid receptors in human keratinocyte HaCaT cells | journal = Experimental Cell Research | volume = 274 | issue = 1 | pages = 130–7 | date = Mar 2002 | pmid = 11855864 | doi = 10.1006/excr.2001.5450 }}
*{{cite journal | author=Nagpal S, Ghosn C, DiSepio D, ''et al.'' |title=Retinoid-dependent recruitment of a histone H1 displacement activity by retinoic acid receptor. |journal=J. Biol. Chem. |volume=274 |issue= 32 |pages= 22563-8 |year= 1999 |pmid= 10428834 |doi=  }}
*{{cite journal  | author=Egea PF, Mitschler A, Rochel N, ''et al.'' |title=Crystal structure of the human RXRalpha ligand-binding domain bound to its natural ligand: 9-cis retinoic acid. |journal=EMBO J. |volume=19 |issue= 11 |pages= 2592-601 |year= 2000 |pmid= 10835357 |doi= 10.1093/emboj/19.11.2592 }}
*{{cite journal | author=Boudjelal M, Voorhees JJ, Fisher GJ |title=Retinoid signaling is attenuated by proteasome-mediated degradation of retinoid receptors in human keratinocyte HaCaT cells. |journal=Exp. Cell Res. |volume=274 |issue= 1 |pages= 130-7 |year= 2002 |pmid= 11855864 |doi= 10.1006/excr.2001.5450 }}
}}
{{refend}}
{{refend}}


{{protein-stub}}
{{gene-12-stub}}
{{Transcription factors}}
{{PDB Gallery|geneid=5916}}
{{Transcription factors|g2}}
{{Retinoid receptor modulators}}
 
[[Category:Intracellular receptors]]
[[Category:Intracellular receptors]]
[[Category:Transcription factors]]
[[Category:Transcription factors]]

Latest revision as of 05:33, 3 December 2017

VALUE_ERROR (nil)
Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

n/a

n/a

RefSeq (protein)

n/a

n/a

Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

Retinoic acid receptor gamma (RAR-γ), also known as NR1B3 (nuclear receptor subfamily 1, group B, member 3) is a nuclear receptor encoded by the RARG gene.[1][2]

Interactions

Retinoic acid receptor gamma has been shown to interact with NCOR1.[3]

See also

References

  1. "Entrez Gene: RARG retinoic acid receptor, gamma".
  2. Lehmann JM, Hoffmann B, Pfahl M (Feb 1991). "Genomic organization of the retinoic acid receptor gamma gene". Nucleic Acids Research. 19 (3): 573–8. doi:10.1093/nar/19.3.573. PMC 333650. PMID 1849262.
  3. Dowell P, Ishmael JE, Avram D, Peterson VJ, Nevrivy DJ, Leid M (May 1999). "Identification of nuclear receptor corepressor as a peroxisome proliferator-activated receptor alpha interacting protein". The Journal of Biological Chemistry. 274 (22): 15901–7. doi:10.1074/jbc.274.22.15901. PMID 10336495.

Further reading