TAF2: Difference between revisions

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{{Infobox_gene}}
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'''Transcription initiation factor TFIID subunit 2''' is a [[protein]] that in humans is encoded by the ''TAF2'' [[gene]].<ref name="pmid9774672">{{cite journal | vauthors = Martinez E, Ge H, Tao Y, Yuan CX, Palhan V, Roeder RG | title = Novel cofactors and TFIIA mediate functional core promoter selectivity by the human TAFII150-containing TFIID complex | journal = Mol Cell Biol | volume = 18 | issue = 11 | pages = 6571–83 |date=Nov 1998 | pmid = 9774672 | pmc = 109242 | doi = }}</ref><ref name="pmid9418870">{{cite journal | vauthors = Kaufmann J, Ahrens K, Koop R, Smale ST, Muller R | title = CIF150, a human cofactor for transcription factor IID-dependent initiator function | journal = Mol Cell Biol | volume = 18 | issue = 1 | pages = 233–9 |date=Jan 1998 | pmid = 9418870 | pmc = 121482 | doi =  }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: TAF2 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=6873}}</ref>
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| image =
| image_source = 
| PDB =
| Name = TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa
| HGNCid = 11536
| Symbol = TAF2
| AltSymbols =; CIF150; TAF2B; TAFII150
| OMIM = 604912
| ECnumber =
| Homologene = 31137
| MGIid = 2443028
| GeneAtlas_image1 = PBB_GE_TAF2_209523_at_tn.png
| Function = {{GNF_GO|id=GO:0003702 |text = RNA polymerase II transcription factor activity}} {{GNF_GO|id=GO:0004179 |text = membrane alanyl aminopeptidase activity}}
| Component = {{GNF_GO|id=GO:0005634 |text = nucleus}} {{GNF_GO|id=GO:0005669 |text = transcription factor TFIID complex}}
| Process = {{GNF_GO|id=GO:0006350 |text = transcription}} {{GNF_GO|id=GO:0006355 |text = regulation of transcription, DNA-dependent}} {{GNF_GO|id=GO:0006367 |text = transcription initiation from RNA polymerase II promoter}} {{GNF_GO|id=GO:0006508 |text = proteolysis}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 6873
    | Hs_Ensembl = ENSG00000064313
    | Hs_RefseqProtein = NP_003175
    | Hs_RefseqmRNA = NM_003184
    | Hs_GenLoc_db =   
    | Hs_GenLoc_chr = 8
    | Hs_GenLoc_start = 120812196
    | Hs_GenLoc_end = 120914255
    | Hs_Uniprot = Q6P1X5
    | Mm_EntrezGene = 319944
    | Mm_Ensembl = ENSMUSG00000037343
    | Mm_RefseqmRNA = XM_885934
    | Mm_RefseqProtein = XP_891027
    | Mm_GenLoc_db = 
    | Mm_GenLoc_chr = 15
    | Mm_GenLoc_start = 54852286
    | Mm_GenLoc_end = 54902012
    | Mm_Uniprot = Q8C176
  }}
}}
'''TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa''', also known as '''TAF2''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: TAF2 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=6873| accessdate = }}</ref>


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{{PBB_Summary
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| section_title =  
| summary_text = Initiation of [[transcription]] by [[RNA polymerase II]] requires the activities of more than 70 polypeptides. The protein that coordinates these activities is [[Transcription Factor II D|transcription factor IID]] (TFIID), which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the [[TATA binding protein]] (TBP) and a group of evolutionarily conserved proteins known as TBP-associated factors or TAFs. TAFs may participate in basal transcription, serve as [[Coactivator (genetics)|coactivator]]s, function in promoter recognition or modify [[general transcription factor]]s (GTFs) to facilitate complex assembly and transcription initiation. This gene encodes one of the larger subunits of TFIID that is stably associated with the TFIID complex. It contributes to interactions at and downstream of the transcription initiation site, interactions that help determine transcription complex response to activators.<ref name="entrez">{{cite web | title = Entrez Gene: TAF2 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=6873| accessdate = }}</ref>
| summary_text = Initiation of [[Transcription (genetics)|transcription]] by [[RNA polymerase II]] requires the activities of more than 70 polypeptides. The protein that coordinates these activities is [[Transcription Factor II D|transcription factor IID]] (TFIID), which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the [[TATA binding protein]] (TBP) and a group of evolutionarily conserved proteins known as TBP-associated factors or TAFs. TAFs may participate in basal transcription, serve as [[Coactivator (genetics)|coactivator]]s, function in promoter recognition or modify [[general transcription factor]]s (GTFs) to facilitate complex assembly and transcription initiation. This gene encodes one of the larger subunits of TFIID that is stably associated with the TFIID complex. It contributes to interactions at and downstream of the transcription initiation site, interactions that help determine transcription complex response to activators.<ref name="entrez"/>
}}
}}


==References==
==References==
{{reflist|2}}
{{reflist}}


==Further reading==
==Further reading==
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| citations =  
| citations =  
*{{cite journal | author=Comai L, Zomerdijk JC, Beckmann H, ''et al.'' |title=Reconstitution of transcription factor SL1: exclusive binding of TBP by SL1 or TFIID subunits. |journal=Science |volume=266 |issue= 5193 |pages= 1966-72 |year= 1995 |pmid= 7801123 |doi=  }}
*{{cite journal   |vauthors=Comai L, Zomerdijk JC, Beckmann H, etal |title=Reconstitution of transcription factor SL1: exclusive binding of TBP by SL1 or TFIID subunits. |journal=Science |volume=266 |issue= 5193 |pages= 1966–72 |year= 1995 |pmid= 7801123 |doi=10.1126/science.7801123 }}
*{{cite journal  | author=Zhou Q, Sharp PA |title=Novel mechanism and factor for regulation by HIV-1 Tat. |journal=EMBO J. |volume=14 |issue= 2 |pages= 321-8 |year= 1995 |pmid= 7835343 |doi=  }}
*{{cite journal  | vauthors=Zhou Q, Sharp PA |title=Novel mechanism and factor for regulation by HIV-1 Tat. |journal=EMBO J. |volume=14 |issue= 2 |pages= 321–8 |year= 1995 |pmid= 7835343 |doi= | pmc=398086 }}
*{{cite journal  | author=Parada CA, Yoon JB, Roeder RG |title=A novel LBP-1-mediated restriction of HIV-1 transcription at the level of elongation in vitro. |journal=J. Biol. Chem. |volume=270 |issue= 5 |pages= 2274-83 |year= 1995 |pmid= 7836461 |doi=  }}
*{{cite journal  | vauthors=Parada CA, Yoon JB, Roeder RG |title=A novel LBP-1-mediated restriction of HIV-1 transcription at the level of elongation in vitro. |journal=J. Biol. Chem. |volume=270 |issue= 5 |pages= 2274–83 |year= 1995 |pmid= 7836461 |doi=10.1074/jbc.270.5.2274 }}
*{{cite journal  | author=Ou SH, Garcia-Martínez LF, Paulssen EJ, Gaynor RB |title=Role of flanking E box motifs in human immunodeficiency virus type 1 TATA element function. |journal=J. Virol. |volume=68 |issue= 11 |pages= 7188-99 |year= 1994 |pmid= 7933101 |doi=  }}
*{{cite journal  | vauthors=Ou SH, Garcia-Martínez LF, Paulssen EJ, Gaynor RB |title=Role of flanking E box motifs in human immunodeficiency virus type 1 TATA element function. |journal=J. Virol. |volume=68 |issue= 11 |pages= 7188–99 |year= 1994 |pmid= 7933101 |doi= | pmc=237158 }}
*{{cite journal | author=Kashanchi F, Piras G, Radonovich MF, ''et al.'' |title=Direct interaction of human TFIID with the HIV-1 transactivator tat. |journal=Nature |volume=367 |issue= 6460 |pages= 295-9 |year= 1994 |pmid= 8121496 |doi= 10.1038/367295a0 }}
*{{cite journal   |vauthors=Kashanchi F, Piras G, Radonovich MF, etal |title=Direct interaction of human TFIID with the HIV-1 transactivator tat. |journal=Nature |volume=367 |issue= 6460 |pages= 295–9 |year= 1994 |pmid= 8121496 |doi= 10.1038/367295a0 }}
*{{cite journal | author=Wang Z, Morris GF, Rice AP, ''et al.'' |title=Wild-type and transactivation-defective mutants of human immunodeficiency virus type 1 Tat protein bind human TATA-binding protein in vitro. |journal=J. Acquir. Immune Defic. Syndr. Hum. Retrovirol. |volume=12 |issue= 2 |pages= 128-38 |year= 1996 |pmid= 8680883 |doi=  }}
*{{cite journal   |vauthors=Wang Z, Morris GF, Rice AP, etal |title=Wild-type and transactivation-defective mutants of human immunodeficiency virus type 1 Tat protein bind human TATA-binding protein in vitro. |journal=J. Acquir. Immune Defic. Syndr. Hum. Retrovirol. |volume=12 |issue= 2 |pages= 128–38 |year= 1996 |pmid= 8680883 |doi=  10.1097/00042560-199606010-00005}}
*{{cite journal  | author=Pendergrast PS, Morrison D, Tansey WP, Hernandez N |title=Mutations in the carboxy-terminal domain of TBP affect the synthesis of human immunodeficiency virus type 1 full-length and short transcripts similarly. |journal=J. Virol. |volume=70 |issue= 8 |pages= 5025-34 |year= 1996 |pmid= 8764009 |doi=  }}
*{{cite journal  | vauthors=Pendergrast PS, Morrison D, Tansey WP, Hernandez N |title=Mutations in the carboxy-terminal domain of TBP affect the synthesis of human immunodeficiency virus type 1 full-length and short transcripts similarly. |journal=J. Virol. |volume=70 |issue= 8 |pages= 5025–34 |year= 1996 |pmid= 8764009 |doi= | pmc=190456 }}
*{{cite journal | author=Kashanchi F, Khleif SN, Duvall JF, ''et al.'' |title=Interaction of human immunodeficiency virus type 1 Tat with a unique site of TFIID inhibits negative cofactor Dr1 and stabilizes the TFIID-TFIIA complex. |journal=J. Virol. |volume=70 |issue= 8 |pages= 5503-10 |year= 1996 |pmid= 8764062 |doi=  }}
*{{cite journal   |vauthors=Kashanchi F, Khleif SN, Duvall JF, etal |title=Interaction of human immunodeficiency virus type 1 Tat with a unique site of TFIID inhibits negative cofactor Dr1 and stabilizes the TFIID-TFIIA complex. |journal=J. Virol. |volume=70 |issue= 8 |pages= 5503–10 |year= 1996 |pmid= 8764062 |doi= | pmc=190508 }}
*{{cite journal  | author=Zhou Q, Sharp PA |title=Tat-SF1: cofactor for stimulation of transcriptional elongation by HIV-1 Tat. |journal=Science |volume=274 |issue= 5287 |pages= 605-10 |year= 1996 |pmid= 8849451 |doi=  }}
*{{cite journal  | vauthors=Zhou Q, Sharp PA |title=Tat-SF1: cofactor for stimulation of transcriptional elongation by HIV-1 Tat. |journal=Science |volume=274 |issue= 5287 |pages= 605–10 |year= 1996 |pmid= 8849451 |doi=10.1126/science.274.5287.605 }}
*{{cite journal  | author=García-Martínez LF, Ivanov D, Gaynor RB |title=Association of Tat with purified HIV-1 and HIV-2 transcription preinitiation complexes. |journal=J. Biol. Chem. |volume=272 |issue= 11 |pages= 6951-8 |year= 1997 |pmid= 9054383 |doi=  }}
*{{cite journal  | vauthors=García-Martínez LF, Ivanov D, Gaynor RB |title=Association of Tat with purified HIV-1 and HIV-2 transcription preinitiation complexes. |journal=J. Biol. Chem. |volume=272 |issue= 11 |pages= 6951–8 |year= 1997 |pmid= 9054383 |doi=10.1074/jbc.272.11.6951 }}
*{{cite journal  | author=Kaufmann J, Ahrens K, Koop R, ''et al.'' |title=CIF150, a human cofactor for transcription factor IID-dependent initiator function. |journal=Mol. Cell. Biol. |volume=18 |issue= 1 |pages= 233-9 |year= 1998 |pmid= 9418870 |doi= }}
*{{cite journal  | vauthors=Martinez E, Kundu TK, Fu J, Roeder RG |title=A human SPT3-TAFII31-GCN5-L acetylase complex distinct from transcription factor IID. |journal=J. Biol. Chem. |volume=273 |issue= 37 |pages= 23781–5 |year= 1998 |pmid= 9726987 |doi=10.1074/jbc.273.37.23781  }}
*{{cite journal  | author=Martinez E, Kundu TK, Fu J, Roeder RG |title=A human SPT3-TAFII31-GCN5-L acetylase complex distinct from transcription factor IID. |journal=J. Biol. Chem. |volume=273 |issue= 37 |pages= 23781-5 |year= 1998 |pmid= 9726987 |doi=  }}
*{{cite journal  | vauthors=Brand M, Yamamoto K, Staub A, Tora L |title=Identification of TATA-binding protein-free TAFII-containing complex subunits suggests a role in nucleosome acetylation and signal transduction. |journal=J. Biol. Chem. |volume=274 |issue= 26 |pages= 18285–9 |year= 1999 |pmid= 10373431 |doi=10.1074/jbc.274.26.18285 }}
*{{cite journal  | author=Martinez E, Ge H, Tao Y, ''et al.'' |title=Novel cofactors and TFIIA mediate functional core promoter selectivity by the human TAFII150-containing TFIID complex. |journal=Mol. Cell. Biol. |volume=18 |issue= 11 |pages= 6571-83 |year= 1998 |pmid= 9774672 |doi=  }}
*{{cite journal  | vauthors=Martin J, Halenbeck R, Kaufmann J |title=Human transcription factor hTAF(II)150 (CIF150) is involved in transcriptional regulation of cell cycle progression. |journal=Mol. Cell. Biol. |volume=19 |issue= 8 |pages= 5548–56 |year= 1999 |pmid= 10409744 |doi=  | pmc=84407  }}
*{{cite journal  | author=Brand M, Yamamoto K, Staub A, Tora L |title=Identification of TATA-binding protein-free TAFII-containing complex subunits suggests a role in nucleosome acetylation and signal transduction. |journal=J. Biol. Chem. |volume=274 |issue= 26 |pages= 18285-9 |year= 1999 |pmid= 10373431 |doi= }}
*{{cite journal  | vauthors=Chalkley GE, Verrijzer CP |title=DNA binding site selection by RNA polymerase II TAFs: a TAF(II)250-TAF(II)150 complex recognizes the initiator. |journal=EMBO J. |volume=18 |issue= 17 |pages= 4835–45 |year= 1999 |pmid= 10469661 |doi= 10.1093/emboj/18.17.4835  | pmc=1171555 }}
*{{cite journal | author=Martin J, Halenbeck R, Kaufmann J |title=Human transcription factor hTAF(II)150 (CIF150) is involved in transcriptional regulation of cell cycle progression. |journal=Mol. Cell. Biol. |volume=19 |issue= 8 |pages= 5548-56 |year= 1999 |pmid= 10409744 |doi= }}
*{{cite journal   |vauthors=Suzuki Y, Tsunoda T, Sese J, etal |title=Identification and characterization of the potential promoter regions of 1031 kinds of human genes. |journal=Genome Res. |volume=11 |issue= 5 |pages= 677–84 |year= 2001 |pmid= 11337467 |doi= 10.1101/gr.164001  | pmc=311086 }}
*{{cite journal | author=Chalkley GE, Verrijzer CP |title=DNA binding site selection by RNA polymerase II TAFs: a TAF(II)250-TAF(II)150 complex recognizes the initiator. |journal=EMBO J. |volume=18 |issue= 17 |pages= 4835-45 |year= 1999 |pmid= 10469661 |doi= 10.1093/emboj/18.17.4835 }}
*{{cite journal   |vauthors=Brand M, Moggs JG, Oulad-Abdelghani M, etal |title=UV-damaged DNA-binding protein in the TFTC complex links DNA damage recognition to nucleosome acetylation. |journal=EMBO J. |volume=20 |issue= 12 |pages= 3187–96 |year= 2001 |pmid= 11406595 |doi= 10.1093/emboj/20.12.3187  | pmc=150203 }}
*{{cite journal | author=Suzuki Y, Tsunoda T, Sese J, ''et al.'' |title=Identification and characterization of the potential promoter regions of 1031 kinds of human genes. |journal=Genome Res. |volume=11 |issue= 5 |pages= 677-84 |year= 2001 |pmid= 11337467 |doi= 10.1101/gr.164001 }}
*{{cite journal   |vauthors=Martinez E, Palhan VB, Tjernberg A, etal |title=Human STAGA complex is a chromatin-acetylating transcription coactivator that interacts with pre-mRNA splicing and DNA damage-binding factors in vivo. |journal=Mol. Cell. Biol. |volume=21 |issue= 20 |pages= 6782–95 |year= 2001 |pmid= 11564863 |doi= 10.1128/MCB.21.20.6782-6795.2001  | pmc=99856 }}
*{{cite journal | author=Brand M, Moggs JG, Oulad-Abdelghani M, ''et al.'' |title=UV-damaged DNA-binding protein in the TFTC complex links DNA damage recognition to nucleosome acetylation. |journal=EMBO J. |volume=20 |issue= 12 |pages= 3187-96 |year= 2001 |pmid= 11406595 |doi= 10.1093/emboj/20.12.3187 }}
*{{cite journal   |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 | pmc=139241 }}
*{{cite journal | author=Martinez E, Palhan VB, Tjernberg A, ''et al.'' |title=Human STAGA complex is a chromatin-acetylating transcription coactivator that interacts with pre-mRNA splicing and DNA damage-binding factors in vivo. |journal=Mol. Cell. Biol. |volume=21 |issue= 20 |pages= 6782-95 |year= 2001 |pmid= 11564863 |doi= 10.1128/MCB.21.20.6782-6795.2001 }}
*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
}}
}}
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{{refend}}
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* {{MeshName|TAF2+protein,+human}}
* {{MeshName|TAF2+protein,+human}}


{{protein-stub}}
{{Transcription factors}}
{{Transcription factors}}
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[[Category:Transcription factors]]
[[Category:Transcription factors]]
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{{gene-8-stub}}

Revision as of 11:32, 15 September 2017

VALUE_ERROR (nil)
Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

n/a

n/a

RefSeq (protein)

n/a

n/a

Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

Transcription initiation factor TFIID subunit 2 is a protein that in humans is encoded by the TAF2 gene.[1][2][3]

Initiation of transcription by RNA polymerase II requires the activities of more than 70 polypeptides. The protein that coordinates these activities is transcription factor IID (TFIID), which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the TATA binding protein (TBP) and a group of evolutionarily conserved proteins known as TBP-associated factors or TAFs. TAFs may participate in basal transcription, serve as coactivators, function in promoter recognition or modify general transcription factors (GTFs) to facilitate complex assembly and transcription initiation. This gene encodes one of the larger subunits of TFIID that is stably associated with the TFIID complex. It contributes to interactions at and downstream of the transcription initiation site, interactions that help determine transcription complex response to activators.[3]

References

  1. Martinez E, Ge H, Tao Y, Yuan CX, Palhan V, Roeder RG (Nov 1998). "Novel cofactors and TFIIA mediate functional core promoter selectivity by the human TAFII150-containing TFIID complex". Mol Cell Biol. 18 (11): 6571–83. PMC 109242. PMID 9774672.
  2. Kaufmann J, Ahrens K, Koop R, Smale ST, Muller R (Jan 1998). "CIF150, a human cofactor for transcription factor IID-dependent initiator function". Mol Cell Biol. 18 (1): 233–9. PMC 121482. PMID 9418870.
  3. 3.0 3.1 "Entrez Gene: TAF2 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa".

Further reading

External links