ATF7: Difference between revisions

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Latest revision as of 03:10, 27 October 2017

Cyclic AMP-dependent transcription factor ATF-7 is a protein that in humans is encoded by the ATF7 gene.^[1]^[2]^[3]

Homonym

In 2001, Peters et al. published a paper showing that ATF-7, a Novel bZIP Protein, interacts with PTP4A1.^[2] This ATF-7 is actually ATF5 and not ATF7, as noted by the authors at the end of their paper ("Note Added in Proof—While this manuscript was under review, sequences for mouse and human ATF-5 were deposited in GenBankTM. It appears that ATF-7 and ATF-5 are likely to be the same protein. In addition, an unrelated sequence named ATF7 has also been deposited in GenBankTM. In order to avoid confusion, future work on the protein described in this publication will likely refer to it as either ATF-5 or ATF-5/7.")^[2]

References

↑ Gaire M, Chatton B, Kedinger C (Aug 1990). "Isolation and characterization of two novel, closely related ATF cDNA clones from HeLa cells". Nucleic Acids Res. 18 (12): 3467–73. doi:10.1093/nar/18.12.3467. PMC 330998. PMID 1694576.
↑ ^2.0 ^2.1 ^2.2 Peters CS, Liang X, Li S, Kannan S, Peng Y, Taub R, Diamond RH (Apr 2001). "ATF-7, a novel bZIP protein, interacts with the PRL-1 protein-tyrosine phosphatase". J Biol Chem. 276 (17): 13718–26. doi:10.1074/jbc.M011562200. PMID 11278933.
↑ "Entrez Gene: ATF7 activating transcription factor 7".

Olsen JV, Blagoev B, Gnad F, Macek B, Kumar C, Mortensen P, Mann M (2006). "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks". Cell. 127 (3): 635–48. doi:10.1016/j.cell.2006.09.026. PMID 17081983.
Hamard PJ, Dalbies-Tran R, Hauss C, Davidson I, Kedinger C, Chatton B (2005). "A functional interaction between ATF7 and TAF12 that is modulated by TAF4". Oncogene. 24 (21): 3472–83. doi:10.1038/sj.onc.1208565. PMID 15735663.
Hamard PJ, Boyer-Guittaut M, Camuzeaux B, Dujardin D, Hauss C, Oelgeschläger T, Vigneron M, Kedinger C, Chatton B (2007). "Sumoylation delays the ATF7 transcription factor subcellular localization and inhibits its transcriptional activity". Nucleic Acids Res. 35 (4): 1134–44. doi:10.1093/nar/gkl1168. PMC 1851647. PMID 17264123.
Breitwieser W, Lyons S, Flenniken AM, Ashton G, Bruder G, Willington M, Lacaud G, Kouskoff V, Jones N (2007). "Feedback regulation of p38 activity via ATF2 is essential for survival of embryonic liver cells". Genes Dev. 21 (16): 2069–82. doi:10.1101/gad.430207. PMC 1948861. PMID 17699753.
Newman JR, Keating AE (2003). "Comprehensive identification of human bZIP interactions with coiled-coil arrays". Science. 300 (5628): 2097–101. doi:10.1126/science.1084648. PMID 12805554.
Newman SP, Bates NP, Vernimmen D, Parker MG, Hurst HC (2000). "Cofactor competition between the ligand-bound oestrogen receptor and an intron 1 enhancer leads to oestrogen repression of ERBB2 expression in breast cancer". Oncogene. 19 (4): 490–7. doi:10.1038/sj.onc.1203416. PMID 10698518.
Goetz J, Chatton B, Mattei MG, Kedinger C (1997). "Structure and expression of the ATFa gene". J. Biol. Chem. 271 (47): 29589–98. doi:10.1074/jbc.271.47.29589. PMID 8939888.
Bocco JL, Bahr A, Goetz J, Hauss C, Kallunki T, Kedinger C, Chatton B (1996). "In vivo association of ATFa with JNK/SAP kinase activities". Oncogene. 12 (9): 1971–80. PMID 8649858.
Pescini R, Kaszubska W, Whelan J, DeLamarter JF, Hooft van Huijsduijnen R (1994). "ATF-a0, a novel variant of the ATF/CREB transcription factor family, forms a dominant transcription inhibitor in ATF-a heterodimers". J. Biol. Chem. 269 (2): 1159–65. PMID 8288576.
Zhou Q, Gedrich RW, Engel DA (1995). "Transcriptional repression of the c-fos gene by YY1 is mediated by a direct interaction with ATF/CREB". J. Virol. 69 (7): 4323–30. PMC 189172. PMID 7769693.

External links

ATF7+protein,+human at the US National Library of Medicine Medical Subject Headings (MeSH)
Human ATF7 genome location and ATF7 gene details page in the UCSC Genome Browser.

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

This article on a gene on human chromosome 12 is a stub. You can help Wikipedia by expanding it.

[pmid1694576-1] Gaire M, Chatton B, Kedinger C (Aug 1990). "Isolation and characterization of two novel, closely related ATF cDNA clones from HeLa cells". Nucleic Acids Res. 18 (12): 3467–73. doi:10.1093/nar/18.12.3467. PMC 330998. PMID 1694576.

[pmid11278933-2] 2.0 ^2.1 ^2.2 Peters CS, Liang X, Li S, Kannan S, Peng Y, Taub R, Diamond RH (Apr 2001). "ATF-7, a novel bZIP protein, interacts with the PRL-1 protein-tyrosine phosphatase". J Biol Chem. 276 (17): 13718–26. doi:10.1074/jbc.M011562200. PMID 11278933.

[entrez-3] "Entrez Gene: ATF7 activating transcription factor 7".

[1]

[2]

[3]

@@ Line 1: / Line 1: @@
-<!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
+{{Infobox_gene}}
-{{PBB_Controls
+'''Cyclic AMP-dependent transcription factor ATF-7''' is a [[protein]] that in humans is encoded by the ''ATF7'' [[gene]].<ref name="pmid1694576">{{cite journal | vauthors = Gaire M, Chatton B, Kedinger C | title = Isolation and characterization of two novel, closely related ATF cDNA clones from HeLa cells | journal = Nucleic Acids Res | volume = 18 | issue = 12 | pages = 3467–73 | date = Aug 1990 | pmid = 1694576 | pmc = 330998 | doi = 10.1093/nar/18.12.3467 }}</ref><ref name="pmid11278933">{{cite journal | vauthors = Peters CS, Liang X, Li S, Kannan S, Peng Y, Taub R, Diamond RH | title = ATF-7, a novel bZIP protein, interacts with the PRL-1 protein-tyrosine phosphatase | journal = J Biol Chem | volume = 276 | issue = 17 | pages = 13718–26 | date = Apr 2001 | pmid = 11278933 | pmc =  | doi = 10.1074/jbc.M011562200 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: ATF7 activating transcription factor 7| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=11016| accessdate = }}</ref>
-| update_page = yes
-| require_manual_inspection = no
-| update_protein_box = yes
-| update_summary = yes
-| update_citations = yes
-}}
-<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
+== Homonym ==
-{{GNF_Protein_box
- | image =
- | image_source =
- | PDB =
- | Name = Activating transcription factor 7
- | HGNCid = 792
- | Symbol = ATF7
- | AltSymbols =; ATFA; MGC57182
- | OMIM = 606371
- | ECnumber =
- | Homologene = 4994
- | MGIid = 2443472
- | GeneAtlas_image1 = PBB_GE_ATF7_206684_s_at_tn.png
- | Function = {{GNF_GO|id=GO:0003676 |text = nucleic acid binding}} {{GNF_GO|id=GO:0003700 |text = transcription factor activity}} {{GNF_GO|id=GO:0008270 |text = zinc ion binding}} {{GNF_GO|id=GO:0043565 |text = sequence-specific DNA binding}} {{GNF_GO|id=GO:0046872 |text = metal ion binding}} {{GNF_GO|id=GO:0046983 |text = protein dimerization activity}}
- | Component = {{GNF_GO|id=GO:0005622 |text = intracellular}} {{GNF_GO|id=GO:0005634 |text = nucleus}}
- | Process = {{GNF_GO|id=GO:0006350 |text = transcription}} {{GNF_GO|id=GO:0006355 |text = regulation of transcription, DNA-dependent}}
- | Orthologs = {{GNF_Ortholog_box
-    | Hs_EntrezGene = 11016
-    | Hs_Ensembl = ENSG00000170653
-    | Hs_RefseqProtein = NP_006847
-    | Hs_RefseqmRNA = NM_006856
-    | Hs_GenLoc_db =
-    | Hs_GenLoc_chr = 12
-    | Hs_GenLoc_start = 52196111
-    | Hs_GenLoc_end = 52306405
-    | Hs_Uniprot = P17544
-    | Mm_EntrezGene = 223922
-    | Mm_Ensembl = ENSMUSG00000052414
-    | Mm_RefseqmRNA = NM_146065
-    | Mm_RefseqProtein = NP_666177
-    | Mm_GenLoc_db =
-    | Mm_GenLoc_chr = 15
-    | Mm_GenLoc_start = 102362255
-    | Mm_GenLoc_end = 102391447
-    | Mm_Uniprot = Q3TZR9
-  }}
-}}
-'''Activating transcription factor 7''', also known as '''ATF7''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: ATF7 activating transcription factor 7| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=11016| accessdate = }}</ref>
-<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
+In 2001, Peters et al. published a paper showing that ATF-7, a Novel bZIP Protein, [[Protein-protein interaction|interacts]] with [[PTP4A1]].<ref name=pmid11278933 />
-{{PBB_Summary
+This ATF-7 is actually [[ATF5]] and not ATF7, as noted by the authors at the end of their paper ("Note Added in Proof—While this manuscript was under review, sequences for mouse and human ATF-5 were deposited in GenBankTM. It appears that ATF-7 and ATF-5 are likely to be the same protein. In addition, an unrelated sequence named ATF7 has also been deposited in GenBankTM. In order to avoid confusion, future work on the protein described in this publication will likely refer to it as either ATF-5 or ATF-5/7.")<ref name="pmid11278933"/>
-| section_title =
-| summary_text =
-}}
-==References==
+== References ==
-{{reflist|2}}
+{{reflist}}
-==Further reading==
+== Further reading ==
 {{refbegin | 2}}
-{{PBB_Further_reading
+* {{cite journal | vauthors = Olsen JV, Blagoev B, Gnad F, Macek B, Kumar C, Mortensen P, Mann M | title = Global, in vivo, and site-specific phosphorylation dynamics in signaling networks | journal = Cell | volume = 127 | issue = 3 | pages = 635–48 | year = 2006 | pmid = 17081983 | doi = 10.1016/j.cell.2006.09.026 }}
-| citations =
+* {{cite journal | vauthors = Hamard PJ, Dalbies-Tran R, Hauss C, Davidson I, Kedinger C, Chatton B | title = A functional interaction between ATF7 and TAF12 that is modulated by TAF4 | journal = Oncogene | volume = 24 | issue = 21 | pages = 3472–83 | year = 2005 | pmid = 15735663 | doi = 10.1038/sj.onc.1208565 }}
-*{{cite journal  | author=Olsen JV, Blagoev B, Gnad F, ''et al.'' |title=Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. |journal=Cell |volume=127 |issue= 3 |pages= 635-48 |year= 2006 |pmid= 17081983 |doi= 10.1016/j.cell.2006.09.026 }}
+* {{cite journal | vauthors = Hamard PJ, Boyer-Guittaut M, Camuzeaux B, Dujardin D, Hauss C, Oelgeschläger T, Vigneron M, Kedinger C, Chatton B | title = Sumoylation delays the ATF7 transcription factor subcellular localization and inhibits its transcriptional activity | journal = Nucleic Acids Res. | volume = 35 | issue = 4 | pages = 1134–44 | year = 2007 | pmid = 17264123 | pmc = 1851647 | doi = 10.1093/nar/gkl1168 }}
-*{{cite journal  | author=Hamard PJ, Dalbies-Tran R, Hauss C, ''et al.'' |title=A functional interaction between ATF7 and TAF12 that is modulated by TAF4. |journal=Oncogene |volume=24 |issue= 21 |pages= 3472-83 |year= 2005 |pmid= 15735663 |doi= 10.1038/sj.onc.1208565 }}
+* {{cite journal | vauthors = Breitwieser W, Lyons S, Flenniken AM, Ashton G, Bruder G, Willington M, Lacaud G, Kouskoff V, Jones N | title = Feedback regulation of p38 activity via ATF2 is essential for survival of embryonic liver cells | journal = Genes Dev. | volume = 21 | issue = 16 | pages = 2069–82 | year = 2007 | pmid = 17699753 | pmc = 1948861 | doi = 10.1101/gad.430207 }}
-*{{cite journal  | author=Werner SR, Lee PA, DeCamp MW, ''et al.'' |title=Enhanced cell cycle progression and down regulation of p21(Cip1/Waf1) by PRL tyrosine phosphatases. |journal=Cancer Lett. |volume=202 |issue= 2 |pages= 201-11 |year= 2004 |pmid= 14643450 |doi=  }}
+* {{cite journal | vauthors = Newman JR, Keating AE | title = Comprehensive identification of human bZIP interactions with coiled-coil arrays | journal = Science | volume = 300 | issue = 5628 | pages = 2097–101 | year = 2003 | pmid = 12805554 | doi = 10.1126/science.1084648 }}
-*{{cite journal  | author=Newman JR, Keating AE |title=Comprehensive identification of human bZIP interactions with coiled-coil arrays. |journal=Science |volume=300 |issue= 5628 |pages= 2097-101 |year= 2003 |pmid= 12805554 |doi= 10.1126/science.1084648 }}
+* {{cite journal | vauthors = Newman SP, Bates NP, Vernimmen D, Parker MG, Hurst HC | title = Cofactor competition between the ligand-bound oestrogen receptor and an intron 1 enhancer leads to oestrogen repression of ERBB2 expression in breast cancer | journal = Oncogene | volume = 19 | issue = 4 | pages = 490–7 | year = 2000 | pmid = 10698518 | doi = 10.1038/sj.onc.1203416 }}
-*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
+* {{cite journal | vauthors = Goetz J, Chatton B, Mattei MG, Kedinger C | title = Structure and expression of the ATFa gene | journal = J. Biol. Chem. | volume = 271 | issue = 47 | pages = 29589–98 | year = 1997 | pmid = 8939888 | doi = 10.1074/jbc.271.47.29589 }}
-*{{cite journal  | author=Peters CS, Liang X, Li S, ''et al.'' |title=ATF-7, a novel bZIP protein, interacts with the PRL-1 protein-tyrosine phosphatase. |journal=J. Biol. Chem. |volume=276 |issue= 17 |pages= 13718-26 |year= 2001 |pmid= 11278933 |doi= 10.1074/jbc.M011562200 }}
+* {{cite journal | vauthors = Bocco JL, Bahr A, Goetz J, Hauss C, Kallunki T, Kedinger C, Chatton B | title = In vivo association of ATFa with JNK/SAP kinase activities | journal = Oncogene | volume = 12 | issue = 9 | pages = 1971–80 | year = 1996 | pmid = 8649858 | doi =  }}
-*{{cite journal  | author=Newman SP, Bates NP, Vernimmen D, ''et al.'' |title=Cofactor competition between the ligand-bound oestrogen receptor and an intron 1 enhancer leads to oestrogen repression of ERBB2 expression in breast cancer. |journal=Oncogene |volume=19 |issue= 4 |pages= 490-7 |year= 2000 |pmid= 10698518 |doi= 10.1038/sj.onc.1203416 }}
+* {{cite journal | vauthors = Pescini R, Kaszubska W, Whelan J, DeLamarter JF, Hooft van Huijsduijnen R | title = ATF-a0, a novel variant of the ATF/CREB transcription factor family, forms a dominant transcription inhibitor in ATF-a heterodimers | journal = J. Biol. Chem. | volume = 269 | issue = 2 | pages = 1159–65 | year = 1994 | pmid = 8288576 | doi =  }}
-*{{cite journal  | author=Goetz J, Chatton B, Mattei MG, Kedinger C |title=Structure and expression of the ATFa gene. |journal=J. Biol. Chem. |volume=271 |issue= 47 |pages= 29589-98 |year= 1997 |pmid= 8939888 |doi=  }}
+* {{cite journal | vauthors = Zhou Q, Gedrich RW, Engel DA | title = Transcriptional repression of the c-fos gene by YY1 is mediated by a direct interaction with ATF/CREB | journal = J. Virol. | volume = 69 | issue = 7 | pages = 4323–30 | year = 1995 | pmid = 7769693 | pmc = 189172 | doi =  }}
-*{{cite journal  | author=Bocco JL, Bahr A, Goetz J, ''et al.'' |title=In vivo association of ATFa with JNK/SAP kinase activities. |journal=Oncogene |volume=12 |issue= 9 |pages= 1971-80 |year= 1996 |pmid= 8649858 |doi=  }}
-*{{cite journal  | author=Pescini R, Kaszubska W, Whelan J, ''et al.'' |title=ATF-a0, a novel variant of the ATF/CREB transcription factor family, forms a dominant transcription inhibitor in ATF-a heterodimers. |journal=J. Biol. Chem. |volume=269 |issue= 2 |pages= 1159-65 |year= 1994 |pmid= 8288576 |doi=  }}
-*{{cite journal  | author=Zhou Q, Gedrich RW, Engel DA |title=Transcriptional repression of the c-fos gene by YY1 is mediated by a direct interaction with ATF/CREB. |journal=J. Virol. |volume=69 |issue= 7 |pages= 4323-30 |year= 1995 |pmid= 7769693 |doi=  }}
-*{{cite journal  | author=Gaire M, Chatton B, Kedinger C |title=Isolation and characterization of two novel, closely related ATF cDNA clones from HeLa cells. |journal=Nucleic Acids Res. |volume=18 |issue= 12 |pages= 3467-73 |year= 1990 |pmid= 1694576 |doi=  }}
-}}
 {{refend}}
 == External links ==
 * {{MeshName|ATF7+protein,+human}}
+* {{UCSC gene info|ATF7}}
+{{NLM content}}
+{{Transcription factors|g1}}
-{{protein-stub}}
+{{DEFAULTSORT:Atf7}}
-{{NLM content}}
-{{Transcription factors}}
 [[Category:Transcription factors]]
-{{WikiDoc Sources}}
+{{gene-12-stub}}

ATF7: Difference between revisions

Latest revision as of 03:10, 27 October 2017

Contents

Homonym

References

Further reading

External links

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