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{{Infobox_gene}}
{{Infobox_gene}}
'''Iron-sulfur cluster assembly enzyme ISCU, mitochondrial''' is a [[protein]] that in humans is encoded by the ''ISCU'' [[gene]].<ref name="pmid8875867">{{cite journal | vauthors = Hwang DM, Dempsey A, Tan KT, Liew CC | title = A modular domain of NifU, a nitrogen fixation cluster protein, is highly conserved in evolution | journal = Journal of Molecular Evolution | volume = 43 | issue = 5 | pages = 536–40 | date = Nov 1996 | pmid = 8875867 | pmc =  | doi = 10.1007/BF02337525 }}</ref><ref name="pmid11060020">{{cite journal | vauthors = Tong WH, Rouault T | title = Distinct iron-sulfur cluster assembly complexes exist in the cytosol and mitochondria of human cells | journal = The EMBO Journal | volume = 19 | issue = 21 | pages = 5692–700 | date = Nov 2000 | pmid = 11060020 | pmc = 305809 | doi = 10.1093/emboj/19.21.5692 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: ISCU iron-sulfur cluster scaffold homolog (E. coli)| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=23479| accessdate = }}</ref>
'''Iron-sulfur cluster assembly enzyme ISCU, mitochondrial''' is a [[protein]] that in humans is encoded by the ''ISCU'' [[gene]].<ref name="pmid8875867">{{cite journal | vauthors = Hwang DM, Dempsey A, Tan KT, Liew CC | title = A modular domain of NifU, a nitrogen fixation cluster protein, is highly conserved in evolution | journal = Journal of Molecular Evolution | volume = 43 | issue = 5 | pages = 536–40 | date = November 1996 | pmid = 8875867 | pmc =  | doi = 10.1007/BF02337525 }}</ref> It encodes an [[Iron–sulfur cluster|iron-sulfur (Fe-S) cluster]] [[scaffold protein]] involved in [<nowiki/>[[2Fe-2S cluster|2Fe-2S]]] and [<nowiki/>[[4Fe-4S]]] cluster synthesis and maturation.<ref name="pmid11060020">{{cite journal | vauthors = Tong WH, Rouault T | title = Distinct iron-sulfur cluster assembly complexes exist in the cytosol and mitochondria of human cells | journal = The EMBO Journal | volume = 19 | issue = 21 | pages = 5692–700 | date = November 2000 | pmid = 11060020 | pmc = 305809 | doi = 10.1093/emboj/19.21.5692 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: ISCU iron-sulfur cluster scaffold homolog (E. coli)| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=23479| access-date = }}{{PD-notice}}</ref><ref name=":1">{{Cite web|url=https://www.uniprot.org/uniprot/Q9H1K1|title=ISCU - Iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor - Homo sapiens (Human) - ISCU gene & protein|website=www.uniprot.org|language=en|access-date=2018-09-04}}{{CC-notice|cc=by4}}</ref><ref name=":0">{{cite journal | vauthors =  | title = UniProt: the universal protein knowledgebase | journal = Nucleic Acids Research | volume = 45 | issue = D1 | pages = D158-D169 | date = January 2017 | pmid = 27899622 | pmc = 5210571 | doi = 10.1093/nar/gkw1099 }}</ref> A deficiency of ISCU is associated with a mitochondrial [[myopathy]] with lifelong [[exercise intolerance]] where only minor exertion causes [[tachycardia]], [[shortness of breath]], [[muscle weakness]] and [[myalgia]].<ref name=":2">{{cite web | vauthors =Mochel F, Haller RG | title = Myopathy with Deficiency of ISCU | url = https://www.ncbi.nlm.nih.gov/books/NBK5299/ | date = 2009-03-31| publisher = [[GeneReviews]] }} Updated 2011 Sep 1{{PD-notice}}</ref>


A deficiency of ISCU is associated with a mitochondrial [[myopathy]] with lifelong [[exercise intolerance]] where only minor exertion causes [[tachycardia]], [[shortness of breath]], [[muscle weakness]] and [[myalgia]].<ref>{{cite web | vauthors =Mochel F, Haller RG | title = Myopathy with Deficiency of ISCU | url = https://www.ncbi.nlm.nih.gov/books/NBK5299/ | date = 2009-03-31| publisher = [[GeneReviews]] }} Updated 2011 Sep 1</ref>
== Structure ==
''ISCU'' is located on the [[Locus (genetics)|q arm]] of [[chromosome 12]] in position 23.3 and has 8 [[Exon|exons]].<ref name="entrez" /> ISCU, the protein encoded by this gene, is a member of the NifU family. It is an iron-sulfur [[transferase]] that contains binding sites for [<nowiki/>[[2Fe-2S cluster|2Fe-2S]]] and [<nowiki/>[[4Fe-4S]]] clusters. ISCU contains a [[transit peptide]], 4 [[Beta sheet|beta strands]], 4 [[Alpha helix|alpha helixes]], and 4 turns.<ref name=":1" /><ref name=":0" /> [[Alternative splicing]] results in transcript variants encoding different [[Protein isoform|protein isoforms]] that localize either to the [[cytosol]] or to the [[mitochondrion]]. A [[pseudogene]] of this gene is present on [[chromosome 1]].<ref name="entrez" />
 
== Function ==
''ISCU'' encodes a component of the [[Iron–sulfur cluster|iron-sulfur (Fe-S) cluster]] scaffold responsible for the synthesis and maturation of [<nowiki/>[[2Fe-2S cluster|2Fe-2S]]] and [<nowiki/>[[4Fe-4S]]] clusters. Fe-S clusters are [[Cofactor (biochemistry)|cofactors]] that play a role in the function of a diverse set of [[Enzyme|enzymes]], including those that regulate [[metabolism]], [[Human iron metabolism|iron homeostasis]], and oxidative stress response. In one process, the [2Fe-2S] cluster transiently assembles on ISCU and is then transferred to [[GLRX5]] in a [[cysteine desulfurase]] complex NFS1-LYRM4/ISD11 dependent process.<ref name="entrez" /><ref name="pmid11060020" /><ref name=":1" /><ref name=":0" />
 
ISCU has two isoforms, isoform 1, which is found in the [[mitochondrion]] and isoform 2, which is found in the [[Cell nucleus|nucleus]] and [[cytoplasm]].<ref name=":1" /><ref name=":0" />
 
== Clinical significance ==
''ISCU'' mutations have been found in patients with [[Heredity|hereditary]] [[mitochondrial myopathy]] with [[exercise intolerance]] and [[lactic acidosis]]. This disease is a result of a deficiency of ISCU that corresponds to the deficiency of mitochondrial [[Iron–sulfur protein|iron-sulfur proteins]] and impaired [[muscle]] oxidative metabolism.<ref name="entrez" /> Characteristics of mitochondrial myopathy with deficiency of ISCU may include lifelong exercise intolerance in which exertion can cause [[tachycardia]], [[dyspnoea]], [[Heart|cardiac]] [[palpitations]], [[shortness of breath]], [[fatigue]], pain of active muscles, [[rhabdomyolysis]], [[myoglobinuria]], elevated [[Lactic acid|lactate]] and [[Pyruvic acid|pyruvate]], decreased [[oxygen]] utilization, large calves, and possibly weakness.<ref name=":3">{{cite journal | vauthors = Mochel F, Knight MA, Tong WH, Hernandez D, Ayyad K, Taivassalo T, Andersen PM, Singleton A, Rouault TA, Fischbeck KH, Haller RG | title = Splice mutation in the iron-sulfur cluster scaffold protein ISCU causes myopathy with exercise intolerance | journal = American Journal of Human Genetics | volume = 82 | issue = 3 | pages = 652–60 | date = March 2008 | pmid = 18304497 | pmc = 2427212 | doi = 10.1016/j.ajhg.2007.12.012 }}</ref><ref name=":1" /><ref name=":0" /><ref name=":2" />
 
=== Genetics ===
This disorder has been associated with several different mutations and is inherited in an [[Dominance (genetics)|autosomal recessive]] manner. It was originally believed to affect only those of northern [[Swedes|Swedish]] ancestry, however the disease has been found in those of [[Norwegians|Norwegian]] and [[Finns|Finnish]] decent as well. The carrier rate in northern Sweden has been estimated at 1:188.<ref name=":3" /> ISCU deficiency has been linked to pathogenic variants including [[Intron|intronic]] variants c.418+382G>C, g.7044G>C,<ref>{{cite journal | vauthors = Sanaker PS, Toompuu M, Hogan VE, He L, Tzoulis C, Chrzanowska-Lightowlers ZM, Taylor RW, Bindoff LA | title = Differences in RNA processing underlie the tissue specific phenotype of ISCU myopathy | journal = Biochimica et Biophysica Acta | volume = 1802 | issue = 6 | pages = 539–44 | date = June 2010 | pmid = 20206689 | doi = 10.1016/j.bbadis.2010.02.010 }}</ref> and IVS5+382 G>C<ref>{{cite journal | vauthors = Kollberg G, Melberg A, Holme E, Oldfors A | title = Transient restoration of succinate dehydrogenase activity after rhabdomyolysis in iron-sulphur cluster deficiency myopathy | journal = Neuromuscular Disorders | volume = 21 | issue = 2 | pages = 115–20 | date = February 2011 | pmid = 21196119 | doi = 10.1016/j.nmd.2010.11.010 }}</ref> as well as a c.149G>A [[missense mutation]] in [[exon]] 3.<ref>{{cite journal | vauthors = Kollberg G, Tulinius M, Melberg A, Darin N, Andersen O, Holmgren D, Oldfors A, Holme E | title = Clinical manifestation and a new ISCU mutation in iron-sulphur cluster deficiency myopathy | journal = Brain | volume = 132 | issue = Pt 8 | pages = 2170–9 | date = August 2009 | pmid = 19567699 | doi = 10.1093/brain/awp152 }}</ref> The intronic mutations have been suggested to activate a [[cryptic splice site]], resulting in the production of a [[Alternative splicing|splice variant]] that encodes a putatively non-functional protein.<ref name=":2" />
 
== Interactions ==
ISCU has been shown to have 235 binary [[Protein–protein interaction|protein-protein interactions]] including 79 co-complex interactions. ISCU appears to interact with ISCS, [[NUP62]], [[SDHB]], [[HPRT1]], CCDC172, [[GOLGA2]], [[IKZF1]], [[KRT40]], [[AGTRAP]], [[NECAB2]], FAM9B, [[BANP]], [[LNX1]], [[MID2]], GOLGA6L9, ccdc136, [[KRT34]], SPERT, [[PICK1]], [[YWHAB]], [[SFN (gene)|SFN]], [[Mannan-binding lectin|mbl]], E7, [[dnaX]], hscB, MAPk-Ak2, hale, and cv-c.<ref>{{cite web | url = https://www.ebi.ac.uk/intact/interactions?conversationContext=3&query=ISCU | title = 235 binary interactions found for search term ISCU | work = IntAct Molecular Interaction Database | publisher = EMBL-EBI | access-date = 2018-09-05 }}</ref>


== References ==
== References ==
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== Further reading ==
== Further reading ==
{{refbegin | 2}}
{{refbegin | 2}}
* {{cite journal | vauthors = Mochel F, Knight MA, Tong WH, Hernandez D, Ayyad K, Taivassalo T, Andersen PM, Singleton A, Rouault TA, Fischbeck KH, Haller RG | title = Splice mutation in the iron-sulfur cluster scaffold protein ISCU causes myopathy with exercise intolerance | journal = American Journal of Human Genetics | volume = 82 | issue = 3 | pages = 652–60 | date = Mar 2008 | pmid = 18304497 | pmc = 2427212 | doi = 10.1016/j.ajhg.2007.12.012 }}
* {{cite journal | vauthors = Mochel F, Knight MA, Tong WH, Hernandez D, Ayyad K, Taivassalo T, Andersen PM, Singleton A, Rouault TA, Fischbeck KH, Haller RG | title = Splice mutation in the iron-sulfur cluster scaffold protein ISCU causes myopathy with exercise intolerance | journal = American Journal of Human Genetics | volume = 82 | issue = 3 | pages = 652–60 | date = March 2008 | pmid = 18304497 | pmc = 2427212 | doi = 10.1016/j.ajhg.2007.12.012 }}
* {{cite journal | vauthors = Li K, Tong WH, Hughes RM, Rouault TA | title = Roles of the mammalian cytosolic cysteine desulfurase, ISCS, and scaffold protein, ISCU, in iron-sulfur cluster assembly | journal = The Journal of Biological Chemistry | volume = 281 | issue = 18 | pages = 12344–51 | date = May 2006 | pmid = 16527810 | doi = 10.1074/jbc.M600582200 }}
* {{cite journal | vauthors = Li K, Tong WH, Hughes RM, Rouault TA | title = Roles of the mammalian cytosolic cysteine desulfurase, ISCS, and scaffold protein, ISCU, in iron-sulfur cluster assembly | journal = The Journal of Biological Chemistry | volume = 281 | issue = 18 | pages = 12344–51 | date = May 2006 | pmid = 16527810 | doi = 10.1074/jbc.M600582200 }}
* {{cite journal | vauthors = Tong WH, Rouault TA | title = Functions of mitochondrial ISCU and cytosolic ISCU in mammalian iron-sulfur cluster biogenesis and iron homeostasis | journal = Cell Metabolism | volume = 3 | issue = 3 | pages = 199–210 | date = Mar 2006 | pmid = 16517407 | doi = 10.1016/j.cmet.2006.02.003 }}
* {{cite journal | vauthors = Tong WH, Rouault TA | title = Functions of mitochondrial ISCU and cytosolic ISCU in mammalian iron-sulfur cluster biogenesis and iron homeostasis | journal = Cell Metabolism | volume = 3 | issue = 3 | pages = 199–210 | date = March 2006 | pmid = 16517407 | doi = 10.1016/j.cmet.2006.02.003 }}
* {{cite journal | vauthors = Acquaviva F, De Biase I, Nezi L, Ruggiero G, Tatangelo F, Pisano C, Monticelli A, Garbi C, Acquaviva AM, Cocozza S | title = Extra-mitochondrial localisation of frataxin and its association with IscU1 during enterocyte-like differentiation of the human colon adenocarcinoma cell line Caco-2 | journal = Journal of Cell Science | volume = 118 | issue = Pt 17 | pages = 3917–24 | date = Sep 2005 | pmid = 16091420 | doi = 10.1242/jcs.02516 }}
* {{cite journal | vauthors = Acquaviva F, De Biase I, Nezi L, Ruggiero G, Tatangelo F, Pisano C, Monticelli A, Garbi C, Acquaviva AM, Cocozza S | title = Extra-mitochondrial localisation of frataxin and its association with IscU1 during enterocyte-like differentiation of the human colon adenocarcinoma cell line Caco-2 | journal = Journal of Cell Science | volume = 118 | issue = Pt 17 | pages = 3917–24 | date = September 2005 | pmid = 16091420 | doi = 10.1242/jcs.02516 }}
* {{cite journal | vauthors = Benzinger A, Muster N, Koch HB, Yates JR, Hermeking H | title = Targeted proteomic analysis of 14-3-3 sigma, a p53 effector commonly silenced in cancer | journal = Molecular & Cellular Proteomics | volume = 4 | issue = 6 | pages = 785–95 | date = Jun 2005 | pmid = 15778465 | doi = 10.1074/mcp.M500021-MCP200 }}
* {{cite journal | vauthors = Benzinger A, Muster N, Koch HB, Yates JR, Hermeking H | title = Targeted proteomic analysis of 14-3-3 sigma, a p53 effector commonly silenced in cancer | journal = Molecular & Cellular Proteomics | volume = 4 | issue = 6 | pages = 785–95 | date = June 2005 | pmid = 15778465 | doi = 10.1074/mcp.M500021-MCP200 }}
{{refend}}
{{refend}}


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{{PDB Gallery|geneid=23479}}


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Latest revision as of 16:16, 6 September 2018

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Identifiers
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Orthologs
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Entrez
Ensembl
UniProt
RefSeq (mRNA)

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RefSeq (protein)

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Location (UCSC)n/an/a
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Iron-sulfur cluster assembly enzyme ISCU, mitochondrial is a protein that in humans is encoded by the ISCU gene.[1] It encodes an iron-sulfur (Fe-S) cluster scaffold protein involved in [2Fe-2S] and [4Fe-4S] cluster synthesis and maturation.[2][3][4][5] A deficiency of ISCU is associated with a mitochondrial myopathy with lifelong exercise intolerance where only minor exertion causes tachycardia, shortness of breath, muscle weakness and myalgia.[6]

Structure

ISCU is located on the q arm of chromosome 12 in position 23.3 and has 8 exons.[3] ISCU, the protein encoded by this gene, is a member of the NifU family. It is an iron-sulfur transferase that contains binding sites for [2Fe-2S] and [4Fe-4S] clusters. ISCU contains a transit peptide, 4 beta strands, 4 alpha helixes, and 4 turns.[4][5] Alternative splicing results in transcript variants encoding different protein isoforms that localize either to the cytosol or to the mitochondrion. A pseudogene of this gene is present on chromosome 1.[3]

Function

ISCU encodes a component of the iron-sulfur (Fe-S) cluster scaffold responsible for the synthesis and maturation of [2Fe-2S] and [4Fe-4S] clusters. Fe-S clusters are cofactors that play a role in the function of a diverse set of enzymes, including those that regulate metabolism, iron homeostasis, and oxidative stress response. In one process, the [2Fe-2S] cluster transiently assembles on ISCU and is then transferred to GLRX5 in a cysteine desulfurase complex NFS1-LYRM4/ISD11 dependent process.[3][2][4][5]

ISCU has two isoforms, isoform 1, which is found in the mitochondrion and isoform 2, which is found in the nucleus and cytoplasm.[4][5]

Clinical significance

ISCU mutations have been found in patients with hereditary mitochondrial myopathy with exercise intolerance and lactic acidosis. This disease is a result of a deficiency of ISCU that corresponds to the deficiency of mitochondrial iron-sulfur proteins and impaired muscle oxidative metabolism.[3] Characteristics of mitochondrial myopathy with deficiency of ISCU may include lifelong exercise intolerance in which exertion can cause tachycardia, dyspnoea, cardiac palpitations, shortness of breath, fatigue, pain of active muscles, rhabdomyolysis, myoglobinuria, elevated lactate and pyruvate, decreased oxygen utilization, large calves, and possibly weakness.[7][4][5][6]

Genetics

This disorder has been associated with several different mutations and is inherited in an autosomal recessive manner. It was originally believed to affect only those of northern Swedish ancestry, however the disease has been found in those of Norwegian and Finnish decent as well. The carrier rate in northern Sweden has been estimated at 1:188.[7] ISCU deficiency has been linked to pathogenic variants including intronic variants c.418+382G>C, g.7044G>C,[8] and IVS5+382 G>C[9] as well as a c.149G>A missense mutation in exon 3.[10] The intronic mutations have been suggested to activate a cryptic splice site, resulting in the production of a splice variant that encodes a putatively non-functional protein.[6]

Interactions

ISCU has been shown to have 235 binary protein-protein interactions including 79 co-complex interactions. ISCU appears to interact with ISCS, NUP62, SDHB, HPRT1, CCDC172, GOLGA2, IKZF1, KRT40, AGTRAP, NECAB2, FAM9B, BANP, LNX1, MID2, GOLGA6L9, ccdc136, KRT34, SPERT, PICK1, YWHAB, SFN, mbl, E7, dnaX, hscB, MAPk-Ak2, hale, and cv-c.[11]

References

  1. Hwang DM, Dempsey A, Tan KT, Liew CC (November 1996). "A modular domain of NifU, a nitrogen fixation cluster protein, is highly conserved in evolution". Journal of Molecular Evolution. 43 (5): 536–40. doi:10.1007/BF02337525. PMID 8875867.
  2. 2.0 2.1 Tong WH, Rouault T (November 2000). "Distinct iron-sulfur cluster assembly complexes exist in the cytosol and mitochondria of human cells". The EMBO Journal. 19 (21): 5692–700. doi:10.1093/emboj/19.21.5692. PMC 305809. PMID 11060020.
  3. 3.0 3.1 3.2 3.3 3.4 "Entrez Gene: ISCU iron-sulfur cluster scaffold homolog (E. coli)". This article incorporates text from this source, which is in the public domain.
  4. 4.0 4.1 4.2 4.3 4.4 "ISCU - Iron-sulfur cluster assembly enzyme ISCU, mitochondrial precursor - Homo sapiens (Human) - ISCU gene & protein". www.uniprot.org. Retrieved 2018-09-04.File:CC-BY-icon-80x15.png This article incorporates text available under the CC BY 4.0 license.
  5. 5.0 5.1 5.2 5.3 5.4 "UniProt: the universal protein knowledgebase". Nucleic Acids Research. 45 (D1): D158–D169. January 2017. doi:10.1093/nar/gkw1099. PMC 5210571. PMID 27899622.
  6. 6.0 6.1 6.2 Mochel F, Haller RG (2009-03-31). "Myopathy with Deficiency of ISCU". GeneReviews. Updated 2011 Sep 1 This article incorporates text from this source, which is in the public domain.
  7. 7.0 7.1 Mochel F, Knight MA, Tong WH, Hernandez D, Ayyad K, Taivassalo T, Andersen PM, Singleton A, Rouault TA, Fischbeck KH, Haller RG (March 2008). "Splice mutation in the iron-sulfur cluster scaffold protein ISCU causes myopathy with exercise intolerance". American Journal of Human Genetics. 82 (3): 652–60. doi:10.1016/j.ajhg.2007.12.012. PMC 2427212. PMID 18304497.
  8. Sanaker PS, Toompuu M, Hogan VE, He L, Tzoulis C, Chrzanowska-Lightowlers ZM, Taylor RW, Bindoff LA (June 2010). "Differences in RNA processing underlie the tissue specific phenotype of ISCU myopathy". Biochimica et Biophysica Acta. 1802 (6): 539–44. doi:10.1016/j.bbadis.2010.02.010. PMID 20206689.
  9. Kollberg G, Melberg A, Holme E, Oldfors A (February 2011). "Transient restoration of succinate dehydrogenase activity after rhabdomyolysis in iron-sulphur cluster deficiency myopathy". Neuromuscular Disorders. 21 (2): 115–20. doi:10.1016/j.nmd.2010.11.010. PMID 21196119.
  10. Kollberg G, Tulinius M, Melberg A, Darin N, Andersen O, Holmgren D, Oldfors A, Holme E (August 2009). "Clinical manifestation and a new ISCU mutation in iron-sulphur cluster deficiency myopathy". Brain. 132 (Pt 8): 2170–9. doi:10.1093/brain/awp152. PMID 19567699.
  11. "235 binary interactions found for search term ISCU". IntAct Molecular Interaction Database. EMBL-EBI. Retrieved 2018-09-05.

Further reading

External links

This article incorporates text from the United States National Library of Medicine, which is in the public domain.