TLX3: Difference between revisions

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Latest revision as of 11:56, 15 September 2017

T-cell leukemia homeobox protein 3 is a protein that in humans is encoded by the TLX3 gene.^[1]^[2]^[3]

RNX (HOX11L2, TLX3) belongs to a family of orphan homeobox genes that encode DNA-binding nuclear transcription factors. Members of the HOX11 gene family are characterized by a threonine-47 replacing cytosine in the highly conserved homeodomain (Dear et al., 1993).[supplied by OMIM]^[3]

References

↑ Lee-Kirsch MA, Engel K, Paditz E, Rosen-Wolff A, Lee YA, Gahr M (Jul 2001). "Assignment of the human homeobox 11-like 2 gene (HOX11L2) to chromosome 5q34→q35 by radiation hybrid mapping". Cytogenet Cell Genet. 92 (3–4): 358. doi:10.1159/000056933. PMID 11435718.
↑ Cinti R, Fava M, Sancandi M, Matera I, Ravazzolo R, Ceccherini I (Jul 2001). "Assignment of the HOX11L2 gene to human chromosome band 5q35.1 and of its murine homolog to mouse chromosome bands 11A4-A5 by in situ hybridization". Cytogenet Cell Genet. 92 (3–4): 354–5. doi:10.1159/000056931. PMID 11435716.
↑ ^3.0 ^3.1 "Entrez Gene: TLX3 T-cell leukemia homeobox 3".

Dear TN, Sanchez-Garcia I, Rabbitts TH (1993). "The HOX11 gene encodes a DNA-binding nuclear transcription factor belonging to a distinct family of homeobox genes". Proc. Natl. Acad. Sci. U.S.A. 90 (10): 4431–5. doi:10.1073/pnas.90.10.4431. PMC 46525. PMID 8099440.
Bernard OA, Busson-LeConiat M, Ballerini P, et al. (2002). "A new recurrent and specific cryptic translocation, t(5;14)(q35;q32), is associated with expression of the Hox11L2 gene in T acute lymphoblastic leukemia". Leukemia. 15 (10): 1495–504. doi:10.1038/sj.leu.2402249. PMID 11587205.
Ballerini P, Blaise A, Busson-Le Coniat M, et al. (2002). "HOX11L2 expression defines a clinical subtype of pediatric T-ALL associated with poor prognosis". Blood. 100 (3): 991–7. doi:10.1182/blood-2001-11-0093. PMID 12130513.
Matera I, Bachetti T, Cinti R, et al. (2003). "Mutational analysis of the RNX gene in congenital central hypoventilation syndrome". Am. J. Med. Genet. 113 (2): 178–82. doi:10.1002/ajmg.10746. PMID 12407709.
Mauvieux L, Leymarie V, Helias C, et al. (2003). "High incidence of Hox11L2 expression in children with T-ALL". Leukemia. 16 (12): 2417–22. doi:10.1038/sj.leu.2402709. PMID 12454747.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Berger R, Dastugue N, Busson M, et al. (2003). "t(5;14)/HOX11L2-positive T-cell acute lymphoblastic leukemia. A collaborative study of the Groupe Français de Cytogénétique Hématologique (GFCH)". Leukemia. 17 (9): 1851–7. doi:10.1038/sj.leu.2403061. PMID 12970786.
Cavé H, Suciu S, Preudhomme C, et al. (2004). "Clinical significance of HOX11L2 expression linked to t(5;14)(q35;q32), of HOX11 expression, and of SIL-TAL fusion in childhood T-cell malignancies: results of EORTC studies 58881 and 58951". Blood. 103 (2): 442–50. doi:10.1182/blood-2003-05-1495. PMID 14504110.
Su XY, Busson M, Della Valle V, et al. (2004). "Various types of rearrangements target TLX3 locus in T-cell acute lymphoblastic leukemia". Genes Chromosomes Cancer. 41 (3): 243–9. doi:10.1002/gcc.20088. PMID 15334547.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Ballerini P, Busson M, Fasola S, et al. (2005). "NUP214-ABL1 amplification in t(5;14)/HOX11L2-positive ALL present with several forms and may have a prognostic significance". Leukemia. 19 (3): 468–70. doi:10.1038/sj.leu.2403654. PMID 15674415.
Gottardo NG, Jacoby PA, Sather HN, et al. (2005). "Significance of HOX11L2/TLX3 expression in children with T-cell acute lymphoblastic leukemia treated on Children's Cancer Group protocols". Leukemia. 19 (9): 1705–8. doi:10.1038/sj.leu.2403834. PMID 15990867.
Borghini S, Vargiolu M, Di Duca M, et al. (2006). "Nuclear factor Y drives basal transcription of the human TLX3, a gene overexpressed in T-cell acute lymphocytic leukemia". Mol. Cancer Res. 4 (9): 635–43. doi:10.1158/1541-7786.MCR-05-0250. PMID 16966433.
Nagel S, Scherr M, Kel A, et al. (2007). "Activation of TLX3 and NKX2-5 in t(5;14)(q35;q32) T-cell acute lymphoblastic leukemia by remote 3'-BCL11B enhancers and coregulation by PU.1 and HMGA1". Cancer Res. 67 (4): 1461–71. doi:10.1158/0008-5472.CAN-06-2615. PMID 17308084.

This article on a gene on human chromosome 5 is a stub. You can help Wikipedia by expanding it.

[pmid11435718-1] Lee-Kirsch MA, Engel K, Paditz E, Rosen-Wolff A, Lee YA, Gahr M (Jul 2001). "Assignment of the human homeobox 11-like 2 gene (HOX11L2) to chromosome 5q34→q35 by radiation hybrid mapping". Cytogenet Cell Genet. 92 (3–4): 358. doi:10.1159/000056933. PMID 11435718.

[pmid11435716-2] Cinti R, Fava M, Sancandi M, Matera I, Ravazzolo R, Ceccherini I (Jul 2001). "Assignment of the HOX11L2 gene to human chromosome band 5q35.1 and of its murine homolog to mouse chromosome bands 11A4-A5 by in situ hybridization". Cytogenet Cell Genet. 92 (3–4): 354–5. doi:10.1159/000056931. PMID 11435716.

[entrez-3] 3.0 ^3.1 "Entrez Gene: TLX3 T-cell leukemia homeobox 3".

[1]

[2]

[3]

@@ Line 1: / Line 1: @@
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+{{Underlinked|date=June 2016}}
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-| update_page = yes
+'''T-cell leukemia homeobox protein 3''' is a [[protein]] that in humans is encoded by the ''TLX3'' [[gene]].<ref name="pmid11435718">{{cite journal | vauthors = Lee-Kirsch MA, Engel K, Paditz E, Rosen-Wolff A, Lee YA, Gahr M | title = Assignment of the human homeobox 11-like 2 gene (HOX11L2) to chromosome 5q34→q35 by radiation hybrid mapping | journal = Cytogenet Cell Genet | volume = 92 | issue = 3–4 | pages = 358 |date=Jul 2001 | pmid = 11435718 | pmc =  | doi =10.1159/000056933  }}</ref><ref name="pmid11435716">{{cite journal | vauthors = Cinti R, Fava M, Sancandi M, Matera I, Ravazzolo R, Ceccherini I | title = Assignment of the HOX11L2 gene to human chromosome band 5q35.1 and of its murine homolog to mouse chromosome bands 11A4-A5 by in situ hybridization | journal = Cytogenet Cell Genet | volume = 92 | issue = 3–4 | pages = 354–5 |date=Jul 2001 | pmid = 11435716 | pmc =  | doi =10.1159/000056931  }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: TLX3 T-cell leukemia homeobox 3| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=30012| accessdate = }}</ref>
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- | image =
- | image_source =
- | PDB =
- | Name = T-cell leukemia homeobox 3
- | HGNCid = 13532
- | Symbol = TLX3
- | AltSymbols =; HOX11L2; MGC29804; RNX
- | OMIM = 604640
- | ECnumber =
- | Homologene = 23181
- | MGIid = 1351209
- | GeneAtlas_image1 = PBB_GE_TLX3_208495_at_tn.png
- | Function = {{GNF_GO|id=GO:0003700 |text = transcription factor activity}} {{GNF_GO|id=GO:0005515 |text = protein binding}} {{GNF_GO|id=GO:0043565 |text = sequence-specific DNA binding}}
- | Component = {{GNF_GO|id=GO:0005634 |text = nucleus}}
- | Process = {{GNF_GO|id=GO:0001764 |text = neuron migration}} {{GNF_GO|id=GO:0006355 |text = regulation of transcription, DNA-dependent}} {{GNF_GO|id=GO:0007275 |text = multicellular organismal development}} {{GNF_GO|id=GO:0007417 |text = central nervous system development}} {{GNF_GO|id=GO:0007585 |text = respiratory gaseous exchange}} {{GNF_GO|id=GO:0030182 |text = neuron differentiation}} {{GNF_GO|id=GO:0045665 |text = negative regulation of neuron differentiation}} {{GNF_GO|id=GO:0048665 |text = neuron fate specification}}
- | Orthologs = {{GNF_Ortholog_box
-    | Hs_EntrezGene = 30012
-    | Hs_Ensembl = ENSG00000164438
-    | Hs_RefseqProtein = NP_066305
-    | Hs_RefseqmRNA = NM_021025
-    | Hs_GenLoc_db =
-    | Hs_GenLoc_chr = 5
-    | Hs_GenLoc_start = 170668893
-    | Hs_GenLoc_end = 170671742
-    | Hs_Uniprot = O43711
-    | Mm_EntrezGene = 27140
-    | Mm_Ensembl = ENSMUSG00000040610
-    | Mm_RefseqmRNA = NM_019916
-    | Mm_RefseqProtein = NP_064300
-    | Mm_GenLoc_db =
-    | Mm_GenLoc_chr = 11
-    | Mm_GenLoc_start = 33101279
-    | Mm_GenLoc_end = 33103459
-    | Mm_Uniprot = Q5SQB4
-  }}
-}}
-'''T-cell leukemia homeobox 3''', also known as '''TLX3''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: TLX3 T-cell leukemia homeobox 3| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=30012| accessdate = }}</ref>
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-| summary_text = RNX (HOX11L2, TLX3) belongs to a family of orphan homeobox genes that encode DNA-binding nuclear transcription factors. Members of the HOX11 gene family are characterized by a threonine-47 replacing cytosine in the highly conserved homeodomain (Dear et al., 1993).[supplied by OMIM]<ref name="entrez">{{cite web | title = Entrez Gene: TLX3 T-cell leukemia homeobox 3| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=30012| accessdate = }}</ref>
+| summary_text = RNX (HOX11L2, TLX3) belongs to a family of orphan homeobox genes that encode DNA-binding nuclear transcription factors. Members of the HOX11 gene family are characterized by a threonine-47 replacing cytosine in the highly conserved homeodomain (Dear et al., 1993).[supplied by OMIM]<ref name="entrez"/>
 }}
 ==References==
-{{reflist|2}}
+{{reflist}}
 ==Further reading==
 {{refbegin | 2}}
 {{PBB_Further_reading
 | citations =
-*{{cite journal  | author=Dear TN, Sanchez-Garcia I, Rabbitts TH |title=The HOX11 gene encodes a DNA-binding nuclear transcription factor belonging to a distinct family of homeobox genes. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=90 |issue= 10 |pages= 4431-5 |year= 1993 |pmid= 8099440 |doi=  }}
+*{{cite journal  | vauthors=Dear TN, Sanchez-Garcia I, Rabbitts TH |title=The HOX11 gene encodes a DNA-binding nuclear transcription factor belonging to a distinct family of homeobox genes |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=90 |issue= 10 |pages= 4431–5 |year= 1993 |pmid= 8099440 |doi=10.1073/pnas.90.10.4431  | pmc=46525  }}
-*{{cite journal  | author=Cinti R, Fava M, Sancandi M, ''et al.'' |title=Assignment of the HOX11L2 gene to human chromosome band 5q35.1 and of its murine homolog to mouse chromosome bands 11A4-A5 by in situ hybridization. |journal=Cytogenet. Cell Genet. |volume=92 |issue= 3-4 |pages= 354-5 |year= 2001 |pmid= 11435716 |doi=  }}
+*{{cite journal   |vauthors=Bernard OA, Busson-LeConiat M, Ballerini P, etal |title=A new recurrent and specific cryptic translocation, t(5;14)(q35;q32), is associated with expression of the Hox11L2 gene in T acute lymphoblastic leukemia |journal=Leukemia |volume=15 |issue= 10 |pages= 1495–504 |year= 2002 |pmid= 11587205 |doi=10.1038/sj.leu.2402249  }}
-*{{cite journal  | author=Lee-Kirsch MA, Engel K, Paditz E, ''et al.'' |title=Assignment of the human homeobox 11-like 2 gene (HOX11L2) to chromosome 5q34-->q35 by radiation hybrid mapping. |journal=Cytogenet. Cell Genet. |volume=92 |issue= 3-4 |pages= 358 |year= 2001 |pmid= 11435718 |doi=  }}
+*{{cite journal   |vauthors=Ballerini P, Blaise A, Busson-Le Coniat M, etal |title=HOX11L2 expression defines a clinical subtype of pediatric T-ALL associated with poor prognosis |journal=Blood |volume=100 |issue= 3 |pages= 991–7 |year= 2002 |pmid= 12130513 |doi= 10.1182/blood-2001-11-0093 }}
-*{{cite journal  | author=Bernard OA, Busson-LeConiat M, Ballerini P, ''et al.'' |title=A new recurrent and specific cryptic translocation, t(5;14)(q35;q32), is associated with expression of the Hox11L2 gene in T acute lymphoblastic leukemia. |journal=Leukemia |volume=15 |issue= 10 |pages= 1495-504 |year= 2002 |pmid= 11587205 |doi=  }}
+*{{cite journal   |vauthors=Matera I, Bachetti T, Cinti R, etal |title=Mutational analysis of the RNX gene in congenital central hypoventilation syndrome |journal=Am. J. Med. Genet. |volume=113 |issue= 2 |pages= 178–82 |year= 2003 |pmid= 12407709 |doi= 10.1002/ajmg.10746 }}
-*{{cite journal  | author=Ballerini P, Blaise A, Busson-Le Coniat M, ''et al.'' |title=HOX11L2 expression defines a clinical subtype of pediatric T-ALL associated with poor prognosis. |journal=Blood |volume=100 |issue= 3 |pages= 991-7 |year= 2002 |pmid= 12130513 |doi= 10.1182/blood-2001-11-0093 }}
+*{{cite journal   |vauthors=Mauvieux L, Leymarie V, Helias C, etal |title=High incidence of Hox11L2 expression in children with T-ALL |journal=Leukemia |volume=16 |issue= 12 |pages= 2417–22 |year= 2003 |pmid= 12454747 |doi= 10.1038/sj.leu.2402709 }}
-*{{cite journal  | author=Matera I, Bachetti T, Cinti R, ''et al.'' |title=Mutational analysis of the RNX gene in congenital central hypoventilation syndrome. |journal=Am. J. Med. Genet. |volume=113 |issue= 2 |pages= 178-82 |year= 2003 |pmid= 12407709 |doi= 10.1002/ajmg.10746 }}
+*{{cite journal   |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 }}
-*{{cite journal  | author=Mauvieux L, Leymarie V, Helias C, ''et al.'' |title=High incidence of Hox11L2 expression in children with T-ALL. |journal=Leukemia |volume=16 |issue= 12 |pages= 2417-22 |year= 2003 |pmid= 12454747 |doi= 10.1038/sj.leu.2402709 }}
+*{{cite journal   |vauthors=Berger R, Dastugue N, Busson M, etal |title=t(5;14)/HOX11L2-positive T-cell acute lymphoblastic leukemia. A collaborative study of the Groupe Français de Cytogénétique Hématologique (GFCH) |journal=Leukemia |volume=17 |issue= 9 |pages= 1851–7 |year= 2003 |pmid= 12970786 |doi= 10.1038/sj.leu.2403061 }}
-*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
+*{{cite journal   |vauthors=Cavé H, Suciu S, Preudhomme C, etal |title=Clinical significance of HOX11L2 expression linked to t(5;14)(q35;q32), of HOX11 expression, and of SIL-TAL fusion in childhood T-cell malignancies: results of EORTC studies 58881 and 58951 |journal=Blood |volume=103 |issue= 2 |pages= 442–50 |year= 2004 |pmid= 14504110 |doi= 10.1182/blood-2003-05-1495 }}
-*{{cite journal  | author=Berger R, Dastugue N, Busson M, ''et al.'' |title=t(5;14)/HOX11L2-positive T-cell acute lymphoblastic leukemia. A collaborative study of the Groupe Français de Cytogénétique Hématologique (GFCH). |journal=Leukemia |volume=17 |issue= 9 |pages= 1851-7 |year= 2003 |pmid= 12970786 |doi= 10.1038/sj.leu.2403061 }}
+*{{cite journal   |vauthors=Su XY, Busson M, Della Valle V, etal |title=Various types of rearrangements target TLX3 locus in T-cell acute lymphoblastic leukemia |journal=Genes Chromosomes Cancer |volume=41 |issue= 3 |pages= 243–9 |year= 2004 |pmid= 15334547 |doi= 10.1002/gcc.20088 }}
-*{{cite journal  | author=Cavé H, Suciu S, Preudhomme C, ''et al.'' |title=Clinical significance of HOX11L2 expression linked to t(5;14)(q35;q32), of HOX11 expression, and of SIL-TAL fusion in childhood T-cell malignancies: results of EORTC studies 58881 and 58951. |journal=Blood |volume=103 |issue= 2 |pages= 442-50 |year= 2004 |pmid= 14504110 |doi= 10.1182/blood-2003-05-1495 }}
+*{{cite journal   |vauthors=Gerhard DS, Wagner L, Feingold EA, etal |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC) |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504  | pmc=528928 }}
-*{{cite journal  | author=Su XY, Busson M, Della Valle V, ''et al.'' |title=Various types of rearrangements target TLX3 locus in T-cell acute lymphoblastic leukemia. |journal=Genes Chromosomes Cancer |volume=41 |issue= 3 |pages= 243-9 |year= 2004 |pmid= 15334547 |doi= 10.1002/gcc.20088 }}
+*{{cite journal   |vauthors=Ballerini P, Busson M, Fasola S, etal |title=NUP214-ABL1 amplification in t(5;14)/HOX11L2-positive ALL present with several forms and may have a prognostic significance |journal=Leukemia |volume=19 |issue= 3 |pages= 468–70 |year= 2005 |pmid= 15674415 |doi= 10.1038/sj.leu.2403654 }}
-*{{cite journal  | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
+*{{cite journal   |vauthors=Gottardo NG, Jacoby PA, Sather HN, etal |title=Significance of HOX11L2/TLX3 expression in children with T-cell acute lymphoblastic leukemia treated on Children's Cancer Group protocols |journal=Leukemia |volume=19 |issue= 9 |pages= 1705–8 |year= 2005 |pmid= 15990867 |doi= 10.1038/sj.leu.2403834 }}
-*{{cite journal  | author=Ballerini P, Busson M, Fasola S, ''et al.'' |title=NUP214-ABL1 amplification in t(5;14)/HOX11L2-positive ALL present with several forms and may have a prognostic significance. |journal=Leukemia |volume=19 |issue= 3 |pages= 468-70 |year= 2005 |pmid= 15674415 |doi= 10.1038/sj.leu.2403654 }}
+*{{cite journal   |vauthors=Borghini S, Vargiolu M, Di Duca M, etal |title=Nuclear factor Y drives basal transcription of the human TLX3, a gene overexpressed in T-cell acute lymphocytic leukemia |journal=Mol. Cancer Res. |volume=4 |issue= 9 |pages= 635–43 |year= 2006 |pmid= 16966433 |doi= 10.1158/1541-7786.MCR-05-0250 }}
-*{{cite journal  | author=Gottardo NG, Jacoby PA, Sather HN, ''et al.'' |title=Significance of HOX11L2/TLX3 expression in children with T-cell acute lymphoblastic leukemia treated on Children's Cancer Group protocols. |journal=Leukemia |volume=19 |issue= 9 |pages= 1705-8 |year= 2005 |pmid= 15990867 |doi= 10.1038/sj.leu.2403834 }}
+*{{cite journal   |vauthors=Nagel S, Scherr M, Kel A, etal |title=Activation of TLX3 and NKX2-5 in t(5;14)(q35;q32) T-cell acute lymphoblastic leukemia by remote 3'-BCL11B enhancers and coregulation by PU.1 and HMGA1 |journal=Cancer Res. |volume=67 |issue= 4 |pages= 1461–71 |year= 2007 |pmid= 17308084 |doi= 10.1158/0008-5472.CAN-06-2615 }}
-*{{cite journal  | author=Borghini S, Vargiolu M, Di Duca M, ''et al.'' |title=Nuclear factor Y drives basal transcription of the human TLX3, a gene overexpressed in T-cell acute lymphocytic leukemia. |journal=Mol. Cancer Res. |volume=4 |issue= 9 |pages= 635-43 |year= 2006 |pmid= 16966433 |doi= 10.1158/1541-7786.MCR-05-0250 }}
-*{{cite journal  | author=Nagel S, Scherr M, Kel A, ''et al.'' |title=Activation of TLX3 and NKX2-5 in t(5;14)(q35;q32) T-cell acute lymphoblastic leukemia by remote 3'-BCL11B enhancers and coregulation by PU.1 and HMGA1. |journal=Cancer Res. |volume=67 |issue= 4 |pages= 1461-71 |year= 2007 |pmid= 17308084 |doi= 10.1158/0008-5472.CAN-06-2615 }}
 }}
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TLX3: Difference between revisions

Latest revision as of 11:56, 15 September 2017

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