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__NOTOC__
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----
<div style="font-size: 12px; font-family: Arial;">{{columns-list|
'''Gram-Positive Cocci:'''&nbsp;
[[#Enterococcus faecalis|Enterococcus faecalis]] &nbsp;●&nbsp;
[[#Enterococcus faecium|Enterococcus faecium]] &nbsp;●&nbsp;
[[#Staphylococcus aureus|Staphylococcus aureus]] &nbsp;●&nbsp;
[[#Staphylococcus, coagulase-negative species|Staphylococcus, coagulase-negative species]] &nbsp;●&nbsp;
[[#Staphylococcus epidermidis|Staphylococcus epidermidis]] &nbsp;●&nbsp;
[[#Staphylococcus haemolyticus|Staphylococcus haemolyticus]] &nbsp;●&nbsp;
[[#Staphylococcus lugdunensis|Staphylococcus lugdunensis]] &nbsp;●&nbsp;
[[#Staphylococcus saprophyticus|Staphylococcus saprophyticus]] &nbsp;●&nbsp;
[[#Streptobacillus moniliformis|Streptobacillus moniliformis]] &nbsp;●&nbsp;
[[#Streptococcus anginosus|Streptococcus anginosus]] &nbsp;●&nbsp;
[[#Streptococcus pneumoniae|Streptococcus pneumoniae]] &nbsp;●&nbsp;
[[#Streptococcus pyogenes|Streptococcus pyogenes]] &nbsp;●&nbsp;
[[#Streptococcus agalactiae|Streptococcus agalactiae]]


[[#Neisseria gonorrhoeae|Neisseria gonorrhoeae]]
----


'''Gram-Positive Bacilli:'''&nbsp;
[[#Actinomyces israelii|Actinomyces israelii]] &nbsp;●&nbsp;
[[#Arcanobacterium haemolyticum|Arcanobacterium haemolyticum]] &nbsp;●&nbsp;
[[#Bacillus anthracis|Bacillus anthracis]] &nbsp;●&nbsp;
[[#Bacillus cereus|Bacillus cereus]] &nbsp;●&nbsp;
[[#Bacillus subtilis|Bacillus subtilis]] &nbsp;●&nbsp;
[[#Clostridium difficile|Clostridium difficile]] &nbsp;●&nbsp;
[[#Clostridium perfringens|Clostridium perfringens]] &nbsp;●&nbsp;
[[#Clostridium tetani|Clostridium tetani]] &nbsp;●&nbsp;
[[#Corynebacterium diphtheriae|Corynebacterium diphtheriae]] &nbsp;●&nbsp;
[[#Corynebacterium jeikeium|Corynebacterium jeikeium]] &nbsp;●&nbsp;
[[#Corynebacterium urealyticum|Corynebacterium urealyticum]] &nbsp;●&nbsp;
[[#Coxiella burnetii|Coxiella burnetii]] &nbsp;●&nbsp;
[[#Ehrlichia|Ehrlichia]] &nbsp;●&nbsp;
[[#Erysipelothrix rhusiopathiae|Erysipelothrix rhusiopathiae]] &nbsp;●&nbsp;
[[#Listeria monocytogenes|Listeria monocytogenes]] &nbsp;●&nbsp;
[[#Lactobacillus|Lactobacillus]] &nbsp;●&nbsp;
[[#Leuconostoc|Leuconostoc]] &nbsp;●&nbsp;
[[#Nocardia|Nocardia]] &nbsp;●&nbsp;
[[#Propionibacterium acnes|Propionibacterium acnes]] &nbsp;●&nbsp;
[[#Rhodococcus equi|Rhodococcus equi]] &nbsp;●&nbsp;
[[#Rickettsia rickettsii|Rickettsia rickettsii]] &nbsp;●&nbsp;
[[#Rickettsia prowazekii|Rickettsia prowazekii]] &nbsp;●&nbsp;
[[#Rickettsia typhi|Rickettsia typhi]]


----


<div id="Neisseria gonorrhoeae">Neisseria gonorrhoeae</div>
'''Gram-Negative Cocci and Coccobacilli:'''&nbsp;
[[#Aggregatibacter aphrophilus|Aggregatibacter aphrophilus]] &nbsp;●&nbsp;
[[#Bordetella pertussis|Bordetella pertussis]] &nbsp;●&nbsp;
[[#Brucella|Brucella]] &nbsp;●&nbsp;
[[#Eikenella corrodens|Eikenella corrodens]] &nbsp;●&nbsp;
[[#Haemophilus ducreyi|Haemophilus ducreyi]] &nbsp;●&nbsp;
[[#Haemophilus influenzae|Haemophilus influenzae]] &nbsp;●&nbsp;
[[#Neisseria gonorrhoeae|Neisseria gonorrhoeae]] &nbsp;●&nbsp;
[[#Neisseria meningitidis|Neisseria meningitidis]] &nbsp;●&nbsp;
[[#Moraxella catarrhalis|Moraxella catarrhalis]] &nbsp;●&nbsp;
[[#Pasteurella multocida|Pasteurella multocida]]


----


* '''Neisseria gonorrhoeae, treatment'''<ref>{{Cite journal| issn = 1545-8601| volume = 64| issue = RR-03| pages = 1–137| last1 = Workowski| first1 = Kimberly A.| last2 = Bolan| first2 = Gail A.| title = Sexually transmitted diseases treatment guidelines, 2015| journal = MMWR. Recommendations and reports: Morbidity and mortality weekly report. Recommendations and reports / Centers for Disease Control| date = 2015-06-05| pmid = 26042815}}</ref>
'''Gram-Negative Bacilli:'''&nbsp;
[[#Achromobacter xylosoxidans|Achromobacter xylosoxidans]] &nbsp;●&nbsp;
[[#Acinetobacter baumannii|Acinetobacter baumannii]] &nbsp;●&nbsp;
[[#Aeromonas hydrophila|Aeromonas hydrophila]] &nbsp;●&nbsp;
[[#Bartonella bacilliformis|Bartonella bacilliformis]] &nbsp;●&nbsp;
[[#Bartonella henselae|Bartonella henselae]] &nbsp;●&nbsp;
[[#Bartonella quintana  |Bartonella quintana  ]] &nbsp;●&nbsp;
[[#Burkholderia cepacia|Burkholderia cepacia]] &nbsp;●&nbsp;
[[#Burkholderia pseudomallei|Burkholderia pseudomallei]] &nbsp;●&nbsp;
[[#Campylobacter fetus|Campylobacter fetus]] &nbsp;●&nbsp;
[[#Campylobacter jejuni|Campylobacter jejuni]] &nbsp;●&nbsp;
[[#Capnocytophaga|Capnocytophaga]] &nbsp;●&nbsp;
[[#Citrobacter freundii|Citrobacter freundii]] &nbsp;●&nbsp;
[[#Citrobacter koseri|Citrobacter koseri]] &nbsp;●&nbsp;
[[#Elizabethkingia meningoseptica|Elizabethkingia meningoseptica]] &nbsp;●&nbsp;
[[#Enterobacter aerogenes|Enterobacter aerogenes]] &nbsp;●&nbsp;
[[#Enterobacter cloacae|Enterobacter cloacae]] &nbsp;●&nbsp;
[[#Escherichia coli|Escherichia coli]] &nbsp;●&nbsp;
[[#Francisella tularensis|Francisella tularensis]] &nbsp;●&nbsp;
[[#Helicobacter pylori|Helicobacter pylori]] &nbsp;●&nbsp;
[[#Klebsiella pneumoniae|Klebsiella pneumoniae]] &nbsp;●&nbsp;
[[#Klebsiella rhinoscleromatis|Klebsiella rhinoscleromatis]] &nbsp;●&nbsp;
[[#Legionella pneumophila|Legionella pneumophila]] &nbsp;●&nbsp;
[[#Morganella morganii|Morganella morganii]] &nbsp;●&nbsp;
[[#Plesiomonas shigelloides|Plesiomonas shigelloides]] &nbsp;●&nbsp;
[[#Proteus vulgaris|Proteus vulgaris]] &nbsp;●&nbsp;
[[#Providencia|Providencia]] &nbsp;●&nbsp;
[[#Pseudomonas aeruginosa|Pseudomonas aeruginosa]] &nbsp;●&nbsp;
[[#Salmonella|Salmonella]] &nbsp;●&nbsp;
[[#Serratia marcescens|Serratia marcescens]] &nbsp;●&nbsp;
[[#Shigella|Shigella]] &nbsp;●&nbsp;
[[#Stenotrophomonas maltophilia|Stenotrophomonas maltophilia]] &nbsp;●&nbsp;
[[#Vibrio cholerae|Vibrio cholerae]] &nbsp;●&nbsp;
[[#Vibrio parahaemolyticus|Vibrio parahaemolyticus]] &nbsp;●&nbsp;
[[#Vibrio vulnificus|Vibrio vulnificus]]


:* '''1. Gonococcal infections in adolescents and adults'''
----
::* '''1.1 Uncomplicated gonococcal infections of the cervix, urethra, and rectum'''
:::* Preferred regimen: [[Ceftriaxone]] 250 mg IM in a single dose {{and}} [[Azithromycin]] 1 g PO in a single dose
:::* Alternative regimen: [[Cefixime]] 400 mg PO in a single dose {{and}} [[Azithromycin]] 1 g PO in a single dose (if ceftriaxone is not available)


::*'''1.2 Uncomplicated gonococcal infections of the pharynx'''
'''Anaerobic Gram-Negative Bacilli:'''&nbsp;
:::* Preferred regimen: [[Ceftriaxone]] 250 mg IM in a single dose {{and}} [[Azithromycin]] 1 g PO in a single dose
[[#Bacteroides fragilis|Bacteroides fragilis]] &nbsp;●&nbsp;
[[#Fusobacterium necrophorum|Fusobacterium necrophorum]]


::::* '''1.2.1 Management of sex partners'''
----
:::::* Expedited partner therapy: [[Cefixime]] 400 mg PO in a single dose {{and}} [[Azithromycin]] 1 g PO in a single dose
:::::* Recent sex partners (i.e., persons having sexual contact with the infected patient within the 60 days preceding onset of symptoms or gonorrhea diagnosis) should be referred for evaluation, testing, and presumptive dual treatment.
:::::* If the patient’s last potential sexual exposure was >60 days before onset of symptoms or diagnosis, the most recent sex partner should be treated.
:::::* To avoid reinfection, sex partners should be instructed to abstain from unprotected sexual intercourse for 7 days after they and their sexual partner(s) have completed treatment and after resolution of symptoms, if present.


::::* '''1.2.2 Allergy, intolerance, and adverse reactions'''
'''Mycobacteria:'''&nbsp;
:::::* Preferred regimen (1): [[Gemifloxacin]] 320 mg PO in a single dose {{and}} [[Azithromycin]] 2 g PO in a single dose
[[#Mycobacterium tuberculosis|Mycobacterium tuberculosis]] &nbsp;●&nbsp;
:::::* Preferred regimen (2): [[Gentamicin]] 240 mg IM in a single dose {{and}} [[Azithromycin]] 2 g PO in a single dose
[[#Mycobacterium abscessus|Mycobacterium abscessus]] &nbsp;●&nbsp;
:::::: Note: Use of ceftriaxone or cefixime is contraindicated in persons with a history of an IgE-mediated penicillin allergy (e.g., anaphylaxis, Stevens Johnson syndrome, and toxic epidermal necrolysis).
[[#Mycobacterium bovis|Mycobacterium bovis]] &nbsp;●&nbsp;
[[#Mycobacterium avium-intracellulare|Mycobacterium avium-intracellulare]] &nbsp;●&nbsp;
[[#Mycobacterium celatum|Mycobacterium celatum]] &nbsp;●&nbsp;
[[#Mycobacterium chelonae|Mycobacterium chelonae]] &nbsp;●&nbsp;
[[#Mycobacterium foruitum|Mycobacterium foruitum]] &nbsp;●&nbsp;
[[#Mycobacterium haemophilum|Mycobacterium haemophilum]] &nbsp;●&nbsp;
[[#Mycobacterium genavense|Mycobacterium genavense]] &nbsp;●&nbsp;
[[#Mycobacterium gordonae|Mycobacterium gordonae]] &nbsp;●&nbsp;
[[#Mycobacterium kansasii|Mycobacterium kansasii]] &nbsp;●&nbsp;
[[#Mycobacterium marinum|Mycobacterium marinum]] &nbsp;●&nbsp;
[[#Mycobacterium scrofulaceum|Mycobacterium scrofulaceum]] &nbsp;●&nbsp;
[[#Mycobacterium simiae|Mycobacterium simiae]] &nbsp;●&nbsp;
[[#Mycobacterium ulcerans|Mycobacterium ulcerans]] &nbsp;●&nbsp;
[[#Mycobacterium xenopi|Mycobacterium xenopi]] &nbsp;●&nbsp;
[[#Mycobacterium leprae|Mycobacterium leprae]]


::::* '''1.2.3 Pregnancy'''
----
:::::* Preferred regimen: [[Ceftriaxone]] 250 mg IM in a single dose {{and}} [[Azithromycin]] 1 g PO in a single dose


::::* '''1.2.4 Suspected cephalosporin treatment failure'''
'''Spirochetes:'''&nbsp;
:::::* Preferred regimen: [[Ceftriaxone]] 250 mg IM in a single dose {{and}} [[Azithromycin]] 1 g PO in a single dose
[[#Borrelia burgdorferi|Borrelia burgdorferi]] &nbsp;●&nbsp;
:::::* Alternative regimen (1): [[Gemifloxacin]] 320 mg PO  single dose  {{and}} [[Azithromycin]] 2 g PO  single dose (when isolates have elevated cephalosporin MICs)
[[#Borrelia recurrentis|Borrelia recurrentis]] &nbsp;●&nbsp;
:::::* Alternative regimen (2): [[Gentamicin]] 240 mg IM  single dose {{and}} [[Azithromycin]] 2 g PO single dose (when isolates have elevated cephalosporin MICs)
[[#Leptospira|Leptospira]] &nbsp;●&nbsp;
:::::* Alternative regimen (3): [[Ceftriaxone]] 250 mg IM as a single dose {{and}} [[Azithromycin]] 2 g PO as a single dose (failure after treatment with cefixime and azithromycin)
[[#Treponema pallidum|Treponema pallidum]]
:::::: Note: Treatment failure should be considered in: (1) persons whose symptoms do not resolve within 3–5 days after appropriate treatment and report no sexual contact during the post-treatment follow-up period; (2) persons with a positive test-of-cure (i.e., positive culture ≥ 72 hours or positive NAAT ≥ 7 days after receiving recommended treatment) when no sexual contact is reported during the post-treatment follow-up period; (3) persons who have a positive culture on test-of-cure (if obtained) if there is evidence of decreased susceptibility to cephalosporins on antimicrobial susceptibility testing, regardless of whether sexual contact is reported during the post-treatment follow-up period.


::* '''1.3 Gonococcal conjunctivitis'''
----
:::* Preferred regimen: [[Ceftriaxone]] 250 mg IM in a single dose {{and}} [[Azithromycin]] 1 g PO in a single dose
:::: Note: Consider one-time lavage of the infected eye with saline solution.


::::* '''1.3.1 Management of sex partners'''
'''Miscellaneous:'''&nbsp;
:::::* Patients should be instructed to refer their sex partners for evaluation and treatment.
[[#Gardnerella vaginalis|Gardnerella vaginalis]] &nbsp;●&nbsp;
[[#Stenotrophomonas maltophilia|Stenotrophomonas maltophilia]] &nbsp;●&nbsp;
[[#Acinetobacter baumannii|Acinetobacter baumannii]] &nbsp;●&nbsp;
[[#Chlamydia pneumoniae|Chlamydia pneumoniae]] &nbsp;●&nbsp;
[[#Chlamydia psittaci|Chlamydia psittaci]] &nbsp;●&nbsp;
[[#Mycoplasma pneumoniae|Mycoplasma pneumoniae]]


::* '''1.4 Disseminated gonococcal infection''' 
----
::::* '''1.4.1 Arthritis and arthritis-dermatitis syndrome '''
:::::* Preferred regimen: [[Ceftriaxone]] 1 g IM/IV q24h for 7 days {{and}} [[Azithromycin]] 1 g PO in a single dose
:::::* Alternative regimen: [[Cefotaxime]] 1 g IV q8h for 7 days {{or}} [[Ceftizoxime]] 1 g IV q 8 h  for 7 days {{and}} [[Azithromycin]] 1 g PO in a single dose


::::* '''1.4.2 Gonococcal meningitis and endocarditis'''
'''Fungi:'''&nbsp;
:::::* Preferred regimen : [[Ceftriaxone]] 1-2 g IV  q 12-24 h  for 10-14 days {{and}} [[Azithromycin]] 1 g PO in a single dose
[[#Aspergillosis|Aspergillosis]] &nbsp;●&nbsp;
[[#Blastomycosis|Blastomycosis]] &nbsp;●&nbsp;
[[#Candidiasis|Candidiasis]] &nbsp;●&nbsp;
[[#Chromoblastomycosis|Chromoblastomycosis]] &nbsp;●&nbsp;
[[#Coccidioidomycosis|Coccidioidomycosis]] &nbsp;●&nbsp;
[[#Cryptococcosis|Cryptococcosis]] &nbsp;●&nbsp;
[[#Dermatophytosis|Dermatophytosis]] &nbsp;●&nbsp;
[[#Onychomycosis|Onychomycosis]] &nbsp;●&nbsp;
[[#Paracoccidioidomycosis|Paracoccidioidomycosis]] &nbsp;●&nbsp;
[[#Tinea capitis|Tinea capitis]] &nbsp;●&nbsp;
[[#Tinea corporis|Tinea corporis]] &nbsp;●&nbsp;
[[#Tinea cruris|Tinea cruris]] &nbsp;●&nbsp;
[[#Tinea pedis|Tinea pedis]] &nbsp;●&nbsp;
[[#Tinea versicolor|Tinea versicolor]]


:* '''2. Gonococcal infections among neonates'''
----
::* '''2.1 Ophthalmia neonatorum caused by N. gonorrhoeae'''
:::* Preferred regimen: [[Ceftriaxone]] 25-50 mg/kg IV or IM in a single dose, not to exceed 125 mg


::::* '''2.1.1 Management of mothers and their sex partners'''
'''Intestinal Protozoa:'''&nbsp;
:::::* Mothers of infants with ophthalmia neonatorum caused by N. gonorrhoeae should be evaluated, tested, and presumptively treated for gonorrhea, along with their sex partner(s).
[[#Balantidium coli|Balantidium coli]] &nbsp;●&nbsp;
[[#Blastocystis hominis|Blastocystis hominis]] &nbsp;●&nbsp;
[[#Cryptosporidium parvum|Cryptosporidium parvum]] &nbsp;●&nbsp;
[[#Cryptosporidium hominis|Cryptosporidium hominis]] &nbsp;●&nbsp;
[[#Cyclospora cayetanensis|Cyclospora cayetanensis]] &nbsp;●&nbsp;
[[#Dientamoeba fragilis|Dientamoeba fragilis]] &nbsp;●&nbsp;
[[#Entamoeba histolytica|Entamoeba histolytica]] &nbsp;●&nbsp;
[[#Giardia lamblia|Giardia lamblia]] &nbsp;●&nbsp;
[[#Isospora belli|Isospora belli]] &nbsp;●&nbsp;
[[#Microsporidiosis|Microsporidiosis]]


::* '''2.2 Disseminated gonococcal infection and gonococcal scalp abscesses in neonates'''
----
:::* Preferred regimen: [[Ceftriaxone]] 25-50 mg/kg/day  IM/IV qd for 7 days {{or}} [[Cefotaxime]] 25 mg/kg IV /IM  q12h for 7 days.
:::: Note (1): The duration of treatment is 10-14 days if meningitis is documented.
:::: Note (2): Ceftriaxone should be administered cautiously to hyperbilirubinemic infants, especially those born prematurely.


::::* '''2.2.1 Management of mothers and their sex partners'''
'''Extratestinal Protozoa:'''&nbsp;
:::::* Mothers of infants who have DGI or scalp abscesses caused by N. gonorrhoeae should be evaluated, tested, and presumptively treated for gonorrhea, along with their sex partner(s).
[[#Acanthamoeba|Acanthamoeba]] &nbsp;●&nbsp;
[[#African trypanosomiasis|African trypanosomiasis]] &nbsp;●&nbsp;
[[#American trypanosomiasis|American trypanosomiasis]] &nbsp;●&nbsp;
[[#Babesia microti|Babesia microti]] &nbsp;●&nbsp;
[[#Balamuthia mandrillaris|Balamuthia mandrillaris]] &nbsp;●&nbsp;
[[#Leishmaniasis|Leishmaniasis]] &nbsp;●&nbsp;
[[#Naegleria fowleri|Naegleria fowleri]] &nbsp;●&nbsp;
[[#Plasmodium|Plasmodium]] &nbsp;●&nbsp;
[[#Toxoplasma gondii|Toxoplasma gondii]] &nbsp;●&nbsp;
[[#Trichomonas vaginalis|Trichomonas vaginalis]]


::* '''2.3 Neonates born to mothers who have gonococcal infection'''
----
:::* Preferred regimen: [[Ceftriaxone]] 25-50 mg/kg IM/IV in a single dose, not to exceed 125 mg


::::* '''2.3.1 Management of mothers and their sex partners'''
'''Intestinal Nematodes (Roundworms):'''&nbsp;
:::::* Mothers who have gonorrhea and their sex partners should be evaluated, tested, and presumptively treated for gonorrhea.
[[#Ascaris lumbricoides|Ascaris lumbricoides]] &nbsp;●&nbsp;
[[#Capillaria philippinensis|Capillaria philippinensis]] &nbsp;●&nbsp;
[[#Enterobius vermicularis|Enterobius vermicularis]] &nbsp;●&nbsp;
[[#Necator americanus|Necator americanus]] &nbsp;●&nbsp;
[[#Ancylostoma duodenale|Ancylostoma duodenale]] &nbsp;●&nbsp;
[[#Strongyloides stercoralis|Strongyloides stercoralis]] &nbsp;●&nbsp;
[[#Trichuris trichiura|Trichuris trichiura]]


:* '''3. Gonococcal infections among infants and children'''
----
::* '''3.1 Infants and children who weigh ≤ 45 kg and who have uncomplicated gonococcal vulvovaginitis, cervicitis, urethritis, pharyngitis, or proctitis'''
:::* Preferred regimen: [[Ceftriaxone]] 25-50 mg/kg IM/IV in a single dose, not to exceed 125 mg


::* '''3.2 Children who weigh > 45 kg and who have uncomplicated gonococcal vulvovaginitis, cervicitis, urethritis, pharyngitis, or proctitis'''
'''Extraintestinal Nematodes (Roundworms):'''&nbsp;
:::* Preferred regimen: [[Ceftriaxone]] 250 mg IM in a single dose {{and}} [[Azithromycin]] 1g PO in a single dose
[[#Ancylostoma braziliense|Ancylostoma braziliense]] &nbsp;●&nbsp;
:::* Alternative regimen: [[Cefixime]] 400 mg PO  single dose {{and}} [[Azithromycin]] 1 g PO single dose.(If ceftriaxone is not available) 
[[#Ancylostoma duodenale|Ancylostoma duodenale]] &nbsp;●&nbsp;
[[#Angiostrongylus cantonensis|Angiostrongylus cantonensis]] &nbsp;●&nbsp;
[[#Filariasis|Filariasis]] &nbsp;●&nbsp;
[[#Onchocerciasis|Onchocerciasis]] &nbsp;●&nbsp;
[[#Strongyloides stercoralis|Strongyloides stercoralis]] &nbsp;●&nbsp;
[[#Trichuris trichiura|Trichuris trichiura]] &nbsp;●&nbsp;
[[#Wuchereria bancrofti|Wuchereria bancrofti]]


::* '''3.3 Children who weigh ≤ 45 kg and who have bacteremia or arthritis'''
----
:::* Preferred regimen: [[Ceftriaxone]] 50 mg/kg (maximum dose: 1 g) IM/IV q24h for 7 days


::* '''3.4 Children who weigh > 45 kg and who have bacteremia or arthritis'''
'''Parasites – Trematodes (Flukes):'''&nbsp;
:::* Preferred regimen: [[Ceftriaxone]] 1 g IM/IV q24h for 7 days
[[#Clonorchis sinensis|Clonorchis sinensis]] &nbsp;●&nbsp;
[[#Dicrocoelium dendriticum|Dicrocoelium dendriticum]] &nbsp;●&nbsp;
[[#Fasciola hepatica|Fasciola hepatica]] &nbsp;●&nbsp;
[[#Paragonimus westermani|Paragonimus westermani]] &nbsp;●&nbsp;
[[#Schistosomiasis|Schistosomiasis]] &nbsp;●&nbsp;


* '''Neisseria gonorrhoeae, prophylaxis'''<ref>{{Cite journal| issn = 1545-8601| volume = 64| issue = RR-03| pages = 1–137| last1 = Workowski| first1 = Kimberly A.| last2 = Bolan| first2 = Gail A.| title = Sexually transmitted diseases treatment guidelines, 2015| journal = MMWR. Recommendations and reports: Morbidity and mortality weekly report. Recommendations and reports / Centers for Disease Control| date = 2015-06-05| pmid = 26042815}}</ref>
----


:* '''1. Ophthalmia neonatorum'''
'''Parasites – Cestodes (Tapeworms):'''&nbsp;
::* Preferred regimen: [[Erythromycin]] 0.5% ophthalmic ointment in each eye in a single application at birth
[[#Echinococcus|Echinococcus]] &nbsp;●&nbsp;
::* Alternative regimen: [[Ceftriaxone]] 25–50 mg/kg IV/IM in a single dose, not to exceed 125 mg (if erythromycin ointment is not available)
[[#Neurocysticercosis|Neurocysticercosis]] &nbsp;●&nbsp;
[[#Sparganosis|Sparganosis]]
 
----
 
'''Parasites – Ectoparasites:'''&nbsp;
[[#Body lice|Body lice]] &nbsp;●&nbsp;
[[#Head lice|Head lice]] &nbsp;●&nbsp;
[[#Myiasis|Myiasis]] &nbsp;●&nbsp;
[[#Pubic lice|Pubic lice]] &nbsp;●&nbsp;
[[#Scabies|Scabies]]
 
----
 
'''Viruses:'''&nbsp;
[[#Adenovirus|Adenovirus]] &nbsp;●&nbsp;
[[#Avian influenza|Avian influenza]] &nbsp;●&nbsp;
[[#BK virus|BK virus]] &nbsp;●&nbsp;
[[#Chikungunya virus|Chikungunya virus]] &nbsp;●&nbsp;
[[#Cytomegalovirus|Cytomegalovirus]] &nbsp;●&nbsp;
[[#Dengue virus|Dengue virus]] &nbsp;●&nbsp;
[[#Ebola virus|Ebola virus]] &nbsp;●&nbsp;
[[#Enterovirus D68|Enterovirus D68]] &nbsp;●&nbsp;
[[#Epstein-Barr virus|Epstein-Barr virus]] &nbsp;●&nbsp;
[[#Hantavirus|Hantavirus]] &nbsp;●&nbsp;
[[#Hepatitis A virus|Hepatitis A virus]] &nbsp;●&nbsp;
[[#Hepatitis B virus|Hepatitis B virus]] &nbsp;●&nbsp;
[[#Hepatitis C virus|Hepatitis C virus]] &nbsp;●&nbsp;
[[#Hepatitis D virus|Hepatitis D virus]] &nbsp;●&nbsp;
[[#Hepatitis E virus|Hepatitis E virus]] &nbsp;●&nbsp;
[[#Herpes simplex virus|Herpes simplex virus]] &nbsp;●&nbsp;
[[#HIV/AIDS|HIV/AIDS]] &nbsp;●&nbsp;
[[#Human herpesvirus 6|Human herpesvirus 6]] &nbsp;●&nbsp;
[[#Human herpesvirus 7|Human herpesvirus 7]] &nbsp;●&nbsp;
[[#Human herpesvirus 8 (KSHV)|Human herpesvirus 8 (KSHV)]] &nbsp;●&nbsp;
[[#Human papillomavirus|Human papillomavirus]] &nbsp;●&nbsp;
[[#Influenza A|Influenza A]] &nbsp;●&nbsp;
[[#Influenza B|Influenza B]] &nbsp;●&nbsp;
[[#JC virus|JC virus]] &nbsp;●&nbsp;
[[#Marburg virus|Marburg virus]] &nbsp;●&nbsp;
[[#Measles|Measles]] &nbsp;●&nbsp;
[[#Middle East respiratory syndrome|Middle East respiratory syndrome]] &nbsp;●&nbsp;
[[#Paramyxovirus|Paramyxovirus]] &nbsp;●&nbsp;
[[#Parvovirus B19|Parvovirus B19]] &nbsp;●&nbsp;
[[#Rabies|Rabies]] &nbsp;●&nbsp;
[[#Respiratory Syncytial Virus|Respiratory Syncytial Virus]] &nbsp;●&nbsp;
[[#Rhinovirus|Rhinovirus]] &nbsp;●&nbsp;
[[#Rotavirus|Rotavirus]] &nbsp;●&nbsp;
[[#SARS|SARS]] &nbsp;●&nbsp;
[[#Smallpox|Smallpox]] &nbsp;●&nbsp;
[[#Swine influenza|Swine influenza]] &nbsp;●&nbsp;
[[#Varicella-zoster virus|Varicella-zoster virus]] &nbsp;●&nbsp;
[[#West Nile virus|West Nile virus]] &nbsp;●&nbsp;
[[#Yellow Fever|Yellow Fever]]
}}</div>
 
----
----
 
<div style="font-size: 12px; font-family: Arial;">{{columns-list|
==A==
<li> [[#Acanthamoeba|Acanthamoeba]] </li>
<li> [[#Achromobacter xylosoxidans|Achromobacter xylosoxidans]] </li>
<li> [[#Acinetobacter baumannii|Acinetobacter baumannii]] </li>
<li> [[#Actinomyces israelii|Actinomyces israelii]] </li>
<li> [[#Adenovirus|Adenovirus]] </li>
<li> [[#Aeromonas hydrophila|Aeromonas hydrophila]] </li>
<li> [[#African trypanosomiasis|African trypanosomiasis]] </li>
<li> [[#Aggregatibacter aphrophilus|Aggregatibacter aphrophilus]] </li>
<li> [[#American trypanosomiasis|American trypanosomiasis]] </li>
<li> [[#Ancylostoma braziliense|Ancylostoma braziliense]] </li>
<li> [[#Ancylostoma duodenale|Ancylostoma duodenale]] </li>
<li> [[#Angiostrongylus cantonensis|Angiostrongylus cantonensis]] </li>
<li> [[#Arcanobacterium haemolyticum|Arcanobacterium haemolyticum]] </li>
<li> [[#Ascaris lumbricoides|Ascaris lumbricoides]] </li>
<li> [[#Aspergillosis|Aspergillosis]] </li>
<li> [[#Avian influenza|Avian influenza]] </li>
==B==
<li> [[#Babesia microti|Babesia microti]] </li>
<li> [[#Bacillus anthracis|Bacillus anthracis]] </li>
<li> [[#Bacillus cereus|Bacillus cereus]] </li>
<li> [[#Bacillus subtilis|Bacillus subtilis]] </li>
<li> [[#Bacteroides fragilis|Bacteroides fragilis]] </li>
<li> [[#Balamuthia mandrillaris|Balamuthia mandrillaris]] </li>
<li> [[#Balantidium coli|Balantidium coli]] </li>
<li> [[#Bartonella bacilliformis|Bartonella bacilliformis]] </li>
<li> [[#Blastocystis hominis|Blastocystis hominis]] </li>
<li> [[#Bartonella henselae|Bartonella henselae]] </li>
<li> [[#Bartonella quintana  |Bartonella quintana  ]] </li>
<li> [[#BK virus|BK virus]] </li>
<li> [[#Blastomycosis|Blastomycosis]] </li>
<li> [[#Body lice|Body lice]] </li>
<li> [[#Bordetella pertussis|Bordetella pertussis]] </li>
<li> [[#Borrelia burgdorferi|Borrelia burgdorferi]] </li>
<li> [[#Borrelia recurrentis|Borrelia recurrentis]] </li>
<li> [[#Brucella|Brucella]] </li>
<li> [[#Brugia malayi|Brugia malayi]] </li>
<li> [[#Burkholderia cepacia|Burkholderia cepacia]] </li>
<li> [[#Burkholderia pseudomallei|Burkholderia pseudomallei]] </li>
==C==
<li> [[#Campylobacter fetus|Campylobacter fetus]] </li>
<li> [[#Campylobacter jejuni|Campylobacter jejuni]] </li>
<li> [[#Candidiasis|Candidiasis]] </li>
<li> [[#Capillaria philippinensis|Capillaria philippinensis]] </li>
<li> [[#Capnocytophaga|Capnocytophaga]] </li>
<li> [[#Chikungunya virus|Chikungunya virus]] </li>
<li> [[#Chlamydia pneumoniae|Chlamydia pneumoniae]] </li>
<li> [[#Chlamydia psittaci|Chlamydia psittaci]] </li>
<li> [[#Chromoblastomycosis|Chromoblastomycosis]] </li>
<li> [[#Citrobacter freundii|Citrobacter freundii]] </li>
<li> [[#Citrobacter koseri|Citrobacter koseri]] </li>
<li> [[#Clonorchis sinensis|Clonorchis sinensis]] </li>
<li> [[#Clostridium difficile|Clostridium difficile]] </li>
<li> [[#Clostridium perfringens|Clostridium perfringens]] </li>
<li> [[#Clostridium tetani|Clostridium tetani]] </li>
<li> [[#Coccidioidomycosis|Coccidioidomycosis]] </li>
<li> [[#Corynebacterium diphtheriae|Corynebacterium diphtheriae]] </li>
<li> [[#Corynebacterium jeikeium|Corynebacterium jeikeium]] </li>
<li> [[#Corynebacterium urealyticum|Corynebacterium urealyticum]] </li>
<li> [[#Coxiella burnetii|Coxiella burnetii]] </li>
<li> [[#Cryptococcosis|Cryptococcosis]] </li>
<li> [[#Cryptosporidium parvum|Cryptosporidium parvum]] </li>
<li> [[#Cryptosporidium hominis|Cryptosporidium hominis]] </li>
<li> [[#Cyclospora cayetanensis|Cyclospora cayetanensis]] </li>
<li> [[#Cytomegalovirus|Cytomegalovirus]] </li>
==D==
<li> [[#Dengue virus|Dengue virus]] </li>
<li> [[#Dermatophytosis|Dermatophytosis]] </li>
<li> [[#Dicrocoelium dendriticum|Dicrocoelium dendriticum]] </li>
<li> [[#Dientamoeba fragilis|Dientamoeba fragilis]] </li>
==E==
<li> [[#Ebola virus|Ebola virus]] </li>
<li> [[#Echinococcus|Echinococcus]] </li>
<li> [[#Ehrlichia|Ehrlichia]] </li>
<li> [[#Eikenella corrodens|Eikenella corrodens]] </li>
<li> [[#Elizabethkingia meningoseptica|Elizabethkingia meningoseptica]] </li>
<li> [[#Entamoeba histolytica|Entamoeba histolytica]] </li>
<li> [[#Enterobacter aerogenes|Enterobacter aerogenes]] </li>
<li> [[#Enterobacter cloacae|Enterobacter cloacae]] </li>
<li> [[#Enterobius vermicularis|Enterobius vermicularis]] </li>
<li> [[#Enterococcus faecalis|Enterococcus faecalis]] </li>
<li> [[#Enterococcus faecium|Enterococcus faecium]] </li>
<li> [[#Enterovirus D68|Enterovirus D68]] </li>
<li> [[#Epstein-Barr virus|Epstein-Barr virus]] </li>
<li> [[#Erysipelothrix rhusiopathiae|Erysipelothrix rhusiopathiae]] </li>
<li> [[#Escherichia coli|Escherichia coli]] </li>
==F==
<li> [[#Fasciola hepatica|Fasciola hepatica]] </li>
<li> [[#Filariasis|Filariasis]] </li>
<li> [[#Francisella tularensis|Francisella tularensis]] </li>
<li> [[#Fusobacterium necrophorum|Fusobacterium necrophorum]] </li>
==G==
<li> [[#Gardnerella vaginalis|Gardnerella vaginalis]] </li>
<li> [[#Giardia lamblia|Giardia lamblia]] </li>
<li> [[#Gnathostoma spinigerum|Gnathostoma spinigerum]] </li>
==H==
<li> [[#Haemophilus ducreyi|Haemophilus ducreyi]] </li>
<li> [[#Haemophilus influenzae|Haemophilus influenzae]] </li>
<li> [[#Hantavirus|Hantavirus]] </li>
<li> [[#Head lice|Head lice]] </li>
<li> [[#Helicobacter pylori|Helicobacter pylori]] </li>
<li> [[#Hepatitis A virus|Hepatitis A virus]] </li>
<li> [[#Hepatitis B virus|Hepatitis B virus]] </li>
<li> [[#Hepatitis C virus|Hepatitis C virus]] </li>
<li> [[#Hepatitis D virus|Hepatitis D virus]] </li>
<li> [[#Hepatitis E virus|Hepatitis E virus]] </li>
<li> [[#Herpes simplex virus|Herpes simplex virus]] </li>
<li> [[#Histoplasmosis|Histoplasmosis]] </li>
<li> [[#HIV/AIDS|HIV/AIDS]] </li>
<li> [[#Human herpesvirus 6|Human herpesvirus 6]] </li>
<li> [[#Human herpesvirus 7|Human herpesvirus 7]] </li>
<li> [[#Human herpesvirus 8 (KSHV)|Human herpesvirus 8 (KSHV)]] </li>
<li> [[#Human papillomavirus|Human papillomavirus]] </li>
==I==
<li> [[#Influenza A|Influenza A]] </li>
<li> [[#Influenza B|Influenza B]] </li>
<li> [[#Isospora belli|Isospora belli]] </li>
==J==
<li> [[#JC virus|JC virus]] </li>
==K==
<li> [[#Klebsiella pneumoniae|Klebsiella pneumoniae]] </li>
<li> [[#Klebsiella rhinoscleromatis|Klebsiella rhinoscleromatis]] </li>
==L==
<li> [[#Lactobacillus|Lactobacillus]] </li>
<li> [[#Legionella pneumophila|Legionella pneumophila]] </li>
<li> [[#Leishmaniasis|Leishmaniasis]] </li>
<li> [[#Leptospira|Leptospira]] </li>
<li> [[#Leuconostoc|Leuconostoc]] </li>
<li> [[#Listeria monocytogenes|Listeria monocytogenes]] </li>
==M==
<li> [[#Marburg virus|Marburg virus]] </li>
<li> [[#Measles|Measles]] </li>
<li> [[#Microsporidiosis|Microsporidiosis]] </li>
<li> [[#Middle East respiratory syndrome|Middle East respiratory syndrome]] </li>
<li> [[#Moraxella catarrhalis|Moraxella catarrhalis]] </li>
<li> [[#Morganella morganii|Morganella morganii]] </li>
<li> [[#Mucormycosis|Mucormycosis]] </li>
<li> [[#Mycobacterium abscessus|Mycobacterium abscessus]] </li>
<li> [[#Mycobacterium avium-intracellulare|Mycobacterium avium-intracellulare]] </li>
<li> [[#Mycobacterium bovis|Mycobacterium bovis]] </li>
<li> [[#Mycobacterium celatum|Mycobacterium celatum]] </li>
<li> [[#Mycobacterium chelonae|Mycobacterium chelonae]] </li>
<li> [[#Mycobacterium foruitum|Mycobacterium foruitum]] </li>
<li> [[#Mycobacterium genavense|Mycobacterium genavense]] </li>
<li> [[#Mycobacterium gordonae|Mycobacterium gordonae]] </li>
<li> [[#Mycobacterium haemophilum|Mycobacterium haemophilum]] </li>
<li> [[#Mycobacterium kansasii|Mycobacterium kansasii]] </li>
<li> [[#Mycobacterium leprae|Mycobacterium leprae]] </li>
<li> [[#Mycobacterium marinum|Mycobacterium marinum]] </li>
<li> [[#Mycobacterium scrofulaceum|Mycobacterium scrofulaceum]] </li>
<li> [[#Mycobacterium simiae|Mycobacterium simiae]] </li>
<li> [[#Mycobacterium tuberculosis|Mycobacterium tuberculosis]] </li>
<li> [[#Mycobacterium ulcerans|Mycobacterium ulcerans]] </li>
<li> [[#Mycobacterium xenopi|Mycobacterium xenopi]] </li>
<li> [[#Mycoplasma pneumoniae|Mycoplasma pneumoniae]] </li>
<li> [[#Myiasis|Myiasis]] </li>
==N==
<li> [[#Naegleria fowleri|Naegleria fowleri]] </li>
<li> [[#Necator americanus|Necator americanus]] </li>
<li> [[#Neisseria gonorrhoeae|Neisseria gonorrhoeae]] </li>
<li> [[#Neisseria meningitidis|Neisseria meningitidis]] </li>
<li> [[#Neurocysticercosis|Neurocysticercosis]] </li>
<li> [[#Nocardia|Nocardia]] </li>
==O==
<li> [[#Onchocerciasis|Onchocerciasis]] </li>
<li> [[#Onychomycosis|Onychomycosis]] </li>
==P==
<li> [[#Paracoccidioidomycosis|Paracoccidioidomycosis]] </li>
<li> [[#Paragonimus westermani|Paragonimus westermani]] </li>
<li> [[#Paramyxovirus|Paramyxovirus]] </li>
<li> [[#Parvovirus B19|Parvovirus B19]] </li>
<li> [[#Pasteurella multocida|Pasteurella multocida]] </li>
<li> [[#Penicilliosis|Penicilliosis]] </li>
<li> [[#Plasmodium|Plasmodium]] </li>
<li> [[#Plesiomonas shigelloides|Plesiomonas shigelloides]] </li>
<li> [[#Pneumocystis jiroveci|Pneumocystis jiroveci]] </li>
<li> [[#Propionibacterium acnes|Propionibacterium acnes]] </li>
<li> [[#Proteus vulgaris|Proteus vulgaris]] </li>
<li> [[#Providencia|Providencia]] </li>
<li> [[#Pseudomonas aeruginosa|Pseudomonas aeruginosa]] </li>
<li> [[#Pubic lice|Pubic lice]] </li>
==R==
<li> [[#Rabies|Rabies]] </li>
<li> [[#Respiratory Syncytial Virus|Respiratory Syncytial Virus]] </li>
<li> [[#Rhinovirus|Rhinovirus]] </li>
<li> [[#Rhodococcus equi|Rhodococcus equi]] </li>
<li> [[#Rickettsia prowazekii|Rickettsia prowazekii]] </li>
<li> [[#Rickettsia rickettsii|Rickettsia rickettsii]] </li>
<li> [[#Rickettsia typhi|Rickettsia typhi]] </li>
<li> [[#Rotavirus|Rotavirus]] </li>
==S==
<li> [[#Salmonella|Salmonella]] </li>
<li> [[#SARS|SARS]] </li>
<li> [[#Scabies|Scabies]] </li>
<li> [[#Schistosomiasis|Schistosomiasis]] </li>
<li> [[#Serratia marcescens|Serratia marcescens]] </li>
<li> [[#Shigella|Shigella]] </li>
<li> [[#Smallpox|Smallpox]] </li>
<li> [[#Sparganosis|Sparganosis]] </li>
<li> [[#Sporotrichosis|Sporotrichosis]] </li>
<li> [[#Staphylococcus aureus|Staphylococcus aureus]] </li>
<li> [[#Staphylococcus epidermidis|Staphylococcus epidermidis]] </li>
<li> [[#Staphylococcus haemolyticus|Staphylococcus haemolyticus]] </li>
<li> [[#Staphylococcus lugdunensis|Staphylococcus lugdunensis]] </li>
<li> [[#Staphylococcus saprophyticus|Staphylococcus saprophyticus]] </li>
<li> [[#Staphylococcus, coagulase-negative species|Staphylococcus, coagulase-negative species]] </li>
<li> [[#Stenotrophomonas maltophilia|Stenotrophomonas maltophilia]] </li>
<li> [[#Streptobacillus moniliformis|Streptobacillus moniliformis]] </li>
<li> [[#Streptococcus agalactiae|Streptococcus agalactiae]] </li>
<li> [[#Streptococcus anginosus|Streptococcus anginosus]] </li>
<li> [[#Streptococcus pneumoniae|Streptococcus pneumoniae]] </li>
<li> [[#Streptococcus pyogenes|Streptococcus pyogenes]] </li>
<li> [[#Strongyloides stercoralis|Strongyloides stercoralis]] </li>
<li> [[#Swine influenza|Swine influenza]] </li>
==T==
<li> [[#Tinea capitis|Tinea capitis]] </li>
<li> [[#Tinea corporis|Tinea corporis]] </li>
<li> [[#Tinea cruris|Tinea cruris]] </li>
<li> [[#Tinea pedis|Tinea pedis]] </li>
<li> [[#Tinea versicolor|Tinea versicolor]] </li>
<li> [[#Toxocariasis|Toxocariasis]] </li>
<li> [[#Toxoplasma gondii|Toxoplasma gondii]] </li>
<li> [[#Treponema pallidum|Treponema pallidum]] </li>
<li> [[#Trichinella spiralis|Trichinella spiralis]] </li>
<li> [[#Trichomonas vaginalis|Trichomonas vaginalis]] </li>
<li> [[#Trichuris trichiura|Trichuris trichiura]] </li>
==V==
<li> [[#Varicella-zoster virus|Varicella-zoster virus]] </li>
<li> [[#Vibrio cholerae|Vibrio cholerae]] </li>
<li> [[#Vibrio parahaemolyticus|Vibrio parahaemolyticus]] </li>
<li> [[#Vibrio vulnificus|Vibrio vulnificus]] </li>
==W==
<li> [[#West Nile virus|West Nile virus]] </li>
<li> [[#Wuchereria bancrofti|Wuchereria bancrofti]] </li>
==Y==
<li> [[#Yellow Fever|Yellow Fever]] </li>
}}</div>
----
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Latest revision as of 22:47, 10 January 2020

Gram-Positive Cocci: 

Enterococcus faecalis  ●  Enterococcus faecium  ●  Staphylococcus aureus  ●  Staphylococcus, coagulase-negative species  ●  Staphylococcus epidermidis  ●  Staphylococcus haemolyticus  ●  Staphylococcus lugdunensis  ●  Staphylococcus saprophyticus  ●  Streptobacillus moniliformis  ●  Streptococcus anginosus  ●  Streptococcus pneumoniae  ●  Streptococcus pyogenes  ●  Streptococcus agalactiae

Gram-Positive Bacilli:  Actinomyces israelii  ●  Arcanobacterium haemolyticum  ●  Bacillus anthracis  ●  Bacillus cereus  ●  Bacillus subtilis  ●  Clostridium difficile  ●  Clostridium perfringens  ●  Clostridium tetani  ●  Corynebacterium diphtheriae  ●  Corynebacterium jeikeium  ●  Corynebacterium urealyticum  ●  Coxiella burnetii  ●  Ehrlichia  ●  Erysipelothrix rhusiopathiae  ●  Listeria monocytogenes  ●  Lactobacillus  ●  Leuconostoc  ●  Nocardia  ●  Propionibacterium acnes  ●  Rhodococcus equi  ●  Rickettsia rickettsii  ●  Rickettsia prowazekii  ●  Rickettsia typhi

Gram-Negative Cocci and Coccobacilli:  Aggregatibacter aphrophilus  ●  Bordetella pertussis  ●  Brucella  ●  Eikenella corrodens  ●  Haemophilus ducreyi  ●  Haemophilus influenzae  ●  Neisseria gonorrhoeae  ●  Neisseria meningitidis  ●  Moraxella catarrhalis  ●  Pasteurella multocida

Gram-Negative Bacilli:  Achromobacter xylosoxidans  ●  Acinetobacter baumannii  ●  Aeromonas hydrophila  ●  Bartonella bacilliformis  ●  Bartonella henselae  ●  Bartonella quintana  ●  Burkholderia cepacia  ●  Burkholderia pseudomallei  ●  Campylobacter fetus  ●  Campylobacter jejuni  ●  Capnocytophaga  ●  Citrobacter freundii  ●  Citrobacter koseri  ●  Elizabethkingia meningoseptica  ●  Enterobacter aerogenes  ●  Enterobacter cloacae  ●  Escherichia coli  ●  Francisella tularensis  ●  Helicobacter pylori  ●  Klebsiella pneumoniae  ●  Klebsiella rhinoscleromatis  ●  Legionella pneumophila  ●  Morganella morganii  ●  Plesiomonas shigelloides  ●  Proteus vulgaris  ●  Providencia  ●  Pseudomonas aeruginosa  ●  Salmonella  ●  Serratia marcescens  ●  Shigella  ●  Stenotrophomonas maltophilia  ●  Vibrio cholerae  ●  Vibrio parahaemolyticus  ●  Vibrio vulnificus

Anaerobic Gram-Negative Bacilli:  Bacteroides fragilis  ●  Fusobacterium necrophorum

Mycobacteria:  Mycobacterium tuberculosis  ●  Mycobacterium abscessus  ●  Mycobacterium bovis  ●  Mycobacterium avium-intracellulare  ●  Mycobacterium celatum  ●  Mycobacterium chelonae  ●  Mycobacterium foruitum  ●  Mycobacterium haemophilum  ●  Mycobacterium genavense  ●  Mycobacterium gordonae  ●  Mycobacterium kansasii  ●  Mycobacterium marinum  ●  Mycobacterium scrofulaceum  ●  Mycobacterium simiae  ●  Mycobacterium ulcerans  ●  Mycobacterium xenopi  ●  Mycobacterium leprae

Spirochetes:  Borrelia burgdorferi  ●  Borrelia recurrentis  ●  Leptospira  ●  Treponema pallidum

Miscellaneous:  Gardnerella vaginalis  ●  Stenotrophomonas maltophilia  ●  Acinetobacter baumannii  ●  Chlamydia pneumoniae  ●  Chlamydia psittaci  ●  Mycoplasma pneumoniae

Fungi:  Aspergillosis  ●  Blastomycosis  ●  Candidiasis  ●  Chromoblastomycosis  ●  Coccidioidomycosis  ●  Cryptococcosis  ●  Dermatophytosis  ●  Onychomycosis  ●  Paracoccidioidomycosis  ●  Tinea capitis  ●  Tinea corporis  ●  Tinea cruris  ●  Tinea pedis  ●  Tinea versicolor

Intestinal Protozoa:  Balantidium coli  ●  Blastocystis hominis  ●  Cryptosporidium parvum  ●  Cryptosporidium hominis  ●  Cyclospora cayetanensis  ●  Dientamoeba fragilis  ●  Entamoeba histolytica  ●  Giardia lamblia  ●  Isospora belli  ●  Microsporidiosis

Extratestinal Protozoa:  Acanthamoeba  ●  African trypanosomiasis  ●  American trypanosomiasis  ●  Babesia microti  ●  Balamuthia mandrillaris  ●  Leishmaniasis  ●  Naegleria fowleri  ●  Plasmodium  ●  Toxoplasma gondii  ●  Trichomonas vaginalis

Intestinal Nematodes (Roundworms):  Ascaris lumbricoides  ●  Capillaria philippinensis  ●  Enterobius vermicularis  ●  Necator americanus  ●  Ancylostoma duodenale  ●  Strongyloides stercoralis  ●  Trichuris trichiura

Extraintestinal Nematodes (Roundworms):  Ancylostoma braziliense  ●  Ancylostoma duodenale  ●  Angiostrongylus cantonensis  ●  Filariasis  ●  Onchocerciasis  ●  Strongyloides stercoralis  ●  Trichuris trichiura  ●  Wuchereria bancrofti

Parasites – Trematodes (Flukes):  Clonorchis sinensis  ●  Dicrocoelium dendriticum  ●  Fasciola hepatica  ●  Paragonimus westermani  ●  Schistosomiasis  ● 

Parasites – Cestodes (Tapeworms):  Echinococcus  ●  Neurocysticercosis  ●  Sparganosis

Parasites – Ectoparasites:  Body lice  ●  Head lice  ●  Myiasis  ●  Pubic lice  ●  Scabies

Viruses:  Adenovirus  ●  Avian influenza  ●  BK virus  ●  Chikungunya virus  ●  Cytomegalovirus  ●  Dengue virus  ●  Ebola virus  ●  Enterovirus D68  ●  Epstein-Barr virus  ●  Hantavirus  ●  Hepatitis A virus  ●  Hepatitis B virus  ●  Hepatitis C virus  ●  Hepatitis D virus  ●  Hepatitis E virus  ●  Herpes simplex virus  ●  HIV/AIDS  ●  Human herpesvirus 6  ●  Human herpesvirus 7  ●  Human herpesvirus 8 (KSHV)  ●  Human papillomavirus  ●  Influenza A  ●  Influenza B  ●  JC virus  ●  Marburg virus  ●  Measles  ●  Middle East respiratory syndrome  ●  Paramyxovirus  ●  Parvovirus B19  ●  Rabies  ●  Respiratory Syncytial Virus  ●  Rhinovirus  ●  Rotavirus  ●  SARS  ●  Smallpox  ●  Swine influenza  ●  Varicella-zoster virus  ●  West Nile virus  ● 

Yellow Fever
==A==
  • Acanthamoeba
  • Achromobacter xylosoxidans
  • Acinetobacter baumannii
  • Actinomyces israelii
  • Adenovirus
  • Aeromonas hydrophila
  • African trypanosomiasis
  • Aggregatibacter aphrophilus
  • American trypanosomiasis
  • Ancylostoma braziliense
  • Ancylostoma duodenale
  • Angiostrongylus cantonensis
  • Arcanobacterium haemolyticum
  • Ascaris lumbricoides
  • Aspergillosis
  • Avian influenza

    • B

  • Babesia microti
  • Bacillus anthracis
  • Bacillus cereus
  • Bacillus subtilis
  • Bacteroides fragilis
  • Balamuthia mandrillaris
  • Balantidium coli
  • Bartonella bacilliformis
  • Blastocystis hominis
  • Bartonella henselae
  • Bartonella quintana
  • BK virus
  • Blastomycosis
  • Body lice
  • Bordetella pertussis
  • Borrelia burgdorferi
  • Borrelia recurrentis
  • Brucella
  • Brugia malayi
  • Burkholderia cepacia
  • Burkholderia pseudomallei

    • C

  • Campylobacter fetus
  • Campylobacter jejuni
  • Candidiasis
  • Capillaria philippinensis
  • Capnocytophaga
  • Chikungunya virus
  • Chlamydia pneumoniae
  • Chlamydia psittaci
  • Chromoblastomycosis
  • Citrobacter freundii
  • Citrobacter koseri
  • Clonorchis sinensis
  • Clostridium difficile
  • Clostridium perfringens
  • Clostridium tetani
  • Coccidioidomycosis
  • Corynebacterium diphtheriae
  • Corynebacterium jeikeium
  • Corynebacterium urealyticum
  • Coxiella burnetii
  • Cryptococcosis
  • Cryptosporidium parvum
  • Cryptosporidium hominis
  • Cyclospora cayetanensis
  • Cytomegalovirus

    • D

  • Dengue virus
  • Dermatophytosis
  • Dicrocoelium dendriticum
  • Dientamoeba fragilis

    • E

  • Ebola virus
  • Echinococcus
  • Ehrlichia
  • Eikenella corrodens
  • Elizabethkingia meningoseptica
  • Entamoeba histolytica
  • Enterobacter aerogenes
  • Enterobacter cloacae
  • Enterobius vermicularis
  • Enterococcus faecalis
  • Enterococcus faecium
  • Enterovirus D68
  • Epstein-Barr virus
  • Erysipelothrix rhusiopathiae
  • Escherichia coli

    • F

  • Fasciola hepatica
  • Filariasis
  • Francisella tularensis
  • Fusobacterium necrophorum

    • G

  • Gardnerella vaginalis
  • Giardia lamblia
  • Gnathostoma spinigerum

    • H

  • Haemophilus ducreyi
  • Haemophilus influenzae
  • Hantavirus
  • Head lice
  • Helicobacter pylori
  • Hepatitis A virus
  • Hepatitis B virus
  • Hepatitis C virus
  • Hepatitis D virus
  • Hepatitis E virus
  • Herpes simplex virus
  • Histoplasmosis
  • HIV/AIDS
  • Human herpesvirus 6
  • Human herpesvirus 7
  • Human herpesvirus 8 (KSHV)
  • Human papillomavirus

    • I

  • Influenza A
  • Influenza B
  • Isospora belli

    • J

  • JC virus

    • K

  • Klebsiella pneumoniae
  • Klebsiella rhinoscleromatis

    • L

  • Lactobacillus
  • Legionella pneumophila
  • Leishmaniasis
  • Leptospira
  • Leuconostoc
  • Listeria monocytogenes

    • M

  • Marburg virus
  • Measles
  • Microsporidiosis
  • Middle East respiratory syndrome
  • Moraxella catarrhalis
  • Morganella morganii
  • Mucormycosis
  • Mycobacterium abscessus
  • Mycobacterium avium-intracellulare
  • Mycobacterium bovis
  • Mycobacterium celatum
  • Mycobacterium chelonae
  • Mycobacterium foruitum
  • Mycobacterium genavense
  • Mycobacterium gordonae
  • Mycobacterium haemophilum
  • Mycobacterium kansasii
  • Mycobacterium leprae
  • Mycobacterium marinum
  • Mycobacterium scrofulaceum
  • Mycobacterium simiae
  • Mycobacterium tuberculosis
  • Mycobacterium ulcerans
  • Mycobacterium xenopi
  • Mycoplasma pneumoniae
  • Myiasis

    • N

  • Naegleria fowleri
  • Necator americanus
  • Neisseria gonorrhoeae
  • Neisseria meningitidis
  • Neurocysticercosis
  • Nocardia

    • O

  • Onchocerciasis
  • Onychomycosis

    • P

  • Paracoccidioidomycosis
  • Paragonimus westermani
  • Paramyxovirus
  • Parvovirus B19
  • Pasteurella multocida
  • Penicilliosis
  • Plasmodium
  • Plesiomonas shigelloides
  • Pneumocystis jiroveci
  • Propionibacterium acnes
  • Proteus vulgaris
  • Providencia
  • Pseudomonas aeruginosa
  • Pubic lice

    • R

  • Rabies
  • Respiratory Syncytial Virus
  • Rhinovirus
  • Rhodococcus equi
  • Rickettsia prowazekii
  • Rickettsia rickettsii
  • Rickettsia typhi
  • Rotavirus

    • S

  • Salmonella
  • SARS
  • Scabies
  • Schistosomiasis
  • Serratia marcescens
  • Shigella
  • Smallpox
  • Sparganosis
  • Sporotrichosis
  • Staphylococcus aureus
  • Staphylococcus epidermidis
  • Staphylococcus haemolyticus
  • Staphylococcus lugdunensis
  • Staphylococcus saprophyticus
  • Staphylococcus, coagulase-negative species
  • Stenotrophomonas maltophilia
  • Streptobacillus moniliformis
  • Streptococcus agalactiae
  • Streptococcus anginosus
  • Streptococcus pneumoniae
  • Streptococcus pyogenes
  • Strongyloides stercoralis
  • Swine influenza

    • T

  • Tinea capitis
  • Tinea corporis
  • Tinea cruris
  • Tinea pedis
  • Tinea versicolor
  • Toxocariasis
  • Toxoplasma gondii
  • Treponema pallidum
  • Trichinella spiralis
  • Trichomonas vaginalis
  • Trichuris trichiura

    • V

  • Varicella-zoster virus
  • Vibrio cholerae
  • Vibrio parahaemolyticus
  • Vibrio vulnificus

    • W

  • West Nile virus
  • Wuchereria bancrofti

    • Y

  • Yellow Fever
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