SWAP70: Difference between revisions

VALUE_ERROR (nil)
Identifiers
Aliases
External IDs	GeneCards: [1]
Orthologs
	n/a
	n/a
	n/a
	n/a
	n/a
	n/a
	n/a
	n/a
	n/a
	n/a
	Wikidata
View/Edit Human

VisualWikitext

Latest revision as of 20:55, 8 November 2017

Switch-associated protein 70 is a protein that in humans and other mammals is encoded by the SWAP70 gene.^[1]^[2]^[3]^[4]

References

↑ Ishikawa K, Nagase T, Suyama M, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O (Dec 1998). "Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro". DNA Res. 5 (3): 169–76. doi:10.1093/dnares/5.3.169. PMID 9734811.
↑ Masat L, Caldwell J, Armstrong R, Khoshnevisan H, Jessberger R, Herndier B, Wabl M, Ferrick D (Apr 2000). "Association of SWAP-70 with the B cell antigen receptor complex". Proc Natl Acad Sci U S A. 97 (5): 2180–4. doi:10.1073/pnas.040374497. PMC 15774. PMID 10681448.
↑ "Entrez Gene: SWAP70 SWAP-70 protein".
↑ Pearce G, Angeli V, Randolph GJ, Junt T, von Andrian U, Schnittler HJ, Jessberger R (August 2006). "Signaling protein SWAP-70 is required for efficient B cell homing to lymphoid organs". Nat. Immunol. 7 (8): 827–34. doi:10.1038/ni1365. PMID 16845395.

Borggrefe T, Wabl M, Akhmedov AT, Jessberger R (1998). "A B-cell-specific DNA recombination complex". J. Biol. Chem. 273 (27): 17025–35. doi:10.1074/jbc.273.27.17025. PMID 9642267.
Rapalus L, Minegishi Y, Lavoie A, et al. (2002). "Analysis of SWAP-70 as a candidate gene for non-X-linked hyper IgM syndrome and common variable immunodeficiency". Clin. Immunol. 101 (3): 270–5. doi:10.1006/clim.2001.5116. PMID 11726218.
Nakayama M, Kikuno R, Ohara O (2003). "Protein-protein interactions between large proteins: two-hybrid screening using a functionally classified library composed of long cDNAs". Genome Res. 12 (11): 1773–84. doi:10.1101/gr.406902. PMC 187542. PMID 12421765.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Hilpelä P, Oberbanscheidt P, Hahne P, et al. (2004). "SWAP-70 identifies a transitional subset of actin filaments in motile cells". Mol. Biol. Cell. 14 (8): 3242–53. doi:10.1091/mbc.E03-01-0043. PMC 181564. PMID 12925760.
Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. doi:10.1038/nature04209. PMID 16189514.
Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC 1356129. PMID 16344560.
Ihara S, Oka T, Fukui Y (2006). "Direct binding of SWAP-70 to non-muscle actin is required for membrane ruffling". J. Cell Sci. 119 (Pt 3): 500–7. doi:10.1242/jcs.02767. PMID 16418221.
Kimbara N, Dohi N, Miyamoto M, et al. (2006). "Diagnostic surface expression of SWAP-70 on HIV-1 infected T cells". Microbiol. Immunol. 50 (3): 235–42. doi:10.1111/j.1348-0421.2006.tb03790.x. PMID 16547421.
Liu J, Li D, Cao B, et al. (2007). "Expression and localization of SWAP-70 in human fetomaternal interface and placenta during tubal pregnancy and normal placentation". J. Histochem. Cytochem. 55 (7): 701–8. doi:10.1369/jhc.6A7151.2007. PMID 17371938.

This article on a gene on human chromosome 11 is a stub. You can help Wikipedia by expanding it.

[pmid9734811-1] Ishikawa K, Nagase T, Suyama M, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O (Dec 1998). "Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro". DNA Res. 5 (3): 169–76. doi:10.1093/dnares/5.3.169. PMID 9734811.

[pmid10681448-2] Masat L, Caldwell J, Armstrong R, Khoshnevisan H, Jessberger R, Herndier B, Wabl M, Ferrick D (Apr 2000). "Association of SWAP-70 with the B cell antigen receptor complex". Proc Natl Acad Sci U S A. 97 (5): 2180–4. doi:10.1073/pnas.040374497. PMC 15774. PMID 10681448.

[entrez-3] "Entrez Gene: SWAP70 SWAP-70 protein".

[pmid16845395-4] Pearce G, Angeli V, Randolph GJ, Junt T, von Andrian U, Schnittler HJ, Jessberger R (August 2006). "Signaling protein SWAP-70 is required for efficient B cell homing to lymphoid organs". Nat. Immunol. 7 (8): 827–34. doi:10.1038/ni1365. PMID 16845395.

[1]

[2]

[3]

[4]

@@ Line 1: / Line 1: @@
-<!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
+{{Underlinked|date=June 2016}}
-{{PBB_Controls
+{{Infobox_gene}}
-| update_page = yes
+'''Switch-associated protein 70''' is a [[protein]] that in humans and other mammals  is encoded by the ''SWAP70'' [[gene]].<ref name="pmid9734811">{{cite journal | vauthors = Ishikawa K, Nagase T, Suyama M, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O | title = Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro | journal = DNA Res | volume = 5 | issue = 3 | pages = 169–76 |date=Dec 1998 | pmid = 9734811 | pmc =  | doi =10.1093/dnares/5.3.169  }}</ref><ref name="pmid10681448">{{cite journal | vauthors = Masat L, Caldwell J, Armstrong R, Khoshnevisan H, Jessberger R, Herndier B, Wabl M, Ferrick D | title = Association of SWAP-70 with the B cell antigen receptor complex | journal = Proc Natl Acad Sci U S A | volume = 97 | issue = 5 | pages = 2180–4 |date=Apr 2000 | pmid = 10681448 | pmc = 15774 | doi = 10.1073/pnas.040374497 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: SWAP70 SWAP-70 protein| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=23075| accessdate = }}</ref><ref name="pmid16845395">{{cite journal | vauthors = Pearce G, Angeli V, Randolph GJ, Junt T, von Andrian U, Schnittler HJ, Jessberger R | title = Signaling protein SWAP-70 is required for efficient B cell homing to lymphoid organs | journal = Nat. Immunol. | volume = 7 | issue = 8 | pages = 827–34 |date=August 2006 | pmid = 16845395 | doi = 10.1038/ni1365 }}</ref>
-| require_manual_inspection = no
-| update_protein_box = yes
-| update_summary = yes
-| update_citations = yes
-}}
-<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
+==References==
-{{GNF_Protein_box
+{{reflist}}
- | image = PBB_Protein_SWAP70_image.jpg
- | image_source = [[Protein_Data_Bank|PDB]] rendering based on 2dn6.
- | PDB = {{PDB2|2dn6}}
- | Name = SWAP-70 protein
- | HGNCid =
- | Symbol = SWAP70
- | AltSymbols =; FLJ39540; HSPC321; KIAA0640; SWAP-70
- | OMIM = 604762
- | ECnumber =
- | Homologene = 7557
- | MGIid = 1298390
- | GeneAtlas_image1 = PBB_GE_SWAP70_209306_s_at_tn.png
- | GeneAtlas_image2 = PBB_GE_SWAP70_209307_at_tn.png
- | Function = {{GNF_GO|id=GO:0003677 |text = DNA binding}} {{GNF_GO|id=GO:0005515 |text = protein binding}} {{GNF_GO|id=GO:0005524 |text = ATP binding}}
- | Component = {{GNF_GO|id=GO:0005634 |text = nucleus}} {{GNF_GO|id=GO:0016020 |text = membrane}}
- | Process = {{GNF_GO|id=GO:0016444 |text = somatic cell DNA recombination}} {{GNF_GO|id=GO:0045190 |text = isotype switching}}
- | Orthologs = {{GNF_Ortholog_box
-    | Hs_EntrezGene = 23075
-    | Hs_Ensembl = ENSG00000133789
-    | Hs_RefseqProtein = NP_055870
-    | Hs_RefseqmRNA = NM_015055
-    | Hs_GenLoc_db =
-    | Hs_GenLoc_chr = 11
-    | Hs_GenLoc_start = 9642248
-    | Hs_GenLoc_end = 9731081
-    | Hs_Uniprot = Q9UH65
-    | Mm_EntrezGene = 20947
-    | Mm_Ensembl = ENSMUSG00000031015
-    | Mm_RefseqmRNA = NM_009302
-    | Mm_RefseqProtein = NP_033328
-    | Mm_GenLoc_db =
-    | Mm_GenLoc_chr = 7
-    | Mm_GenLoc_start = 110012938
-    | Mm_GenLoc_end = 110074683
-    | Mm_Uniprot = Q6A028
-  }}
-}}
-'''SWAP-70 protein''', also known as '''SWAP70''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: SWAP70 SWAP-70 protein| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=23075| accessdate = }}</ref>
-<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
-{{PBB_Summary
-| section_title =
-| summary_text =
-}}
-==References==
-{{reflist|2}}
 ==Further reading==
 {{refbegin | 2}}
-{{PBB_Further_reading
+*{{cite journal  | vauthors=Borggrefe T, Wabl M, Akhmedov AT, Jessberger R |title=A B-cell-specific DNA recombination complex. |journal=J. Biol. Chem. |volume=273 |issue= 27 |pages= 17025–35 |year= 1998 |pmid= 9642267 |doi=10.1074/jbc.273.27.17025  }}
-| citations =
+*{{cite journal   |vauthors=Rapalus L, Minegishi Y, Lavoie A, etal |title=Analysis of SWAP-70 as a candidate gene for non-X-linked hyper IgM syndrome and common variable immunodeficiency. |journal=Clin. Immunol. |volume=101 |issue= 3 |pages= 270–5 |year= 2002 |pmid= 11726218 |doi= 10.1006/clim.2001.5116 }}
-*{{cite journal  | author=Borggrefe T, Wabl M, Akhmedov AT, Jessberger R |title=A B-cell-specific DNA recombination complex. |journal=J. Biol. Chem. |volume=273 |issue= 27 |pages= 17025-35 |year= 1998 |pmid= 9642267 |doi=  }}
+*{{cite journal  | vauthors=Nakayama M, Kikuno R, Ohara O |title=Protein-protein interactions between large proteins: two-hybrid screening using a functionally classified library composed of long cDNAs. |journal=Genome Res. |volume=12 |issue= 11 |pages= 1773–84 |year= 2003 |pmid= 12421765 |doi= 10.1101/gr.406902  | pmc=187542 }}
-*{{cite journal  | author=Ishikawa K, Nagase T, Suyama M, ''et al.'' |title=Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro. |journal=DNA Res. |volume=5 |issue= 3 |pages= 169-76 |year= 1998 |pmid= 9734811 |doi=  }}
+*{{cite journal   |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 }}
-*{{cite journal  | author=Masat L, Caldwell J, Armstrong R, ''et al.'' |title=Association of SWAP-70 with the B cell antigen receptor complex. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=97 |issue= 5 |pages= 2180-4 |year= 2000 |pmid= 10681448 |doi= 10.1073/pnas.040374497 }}
+*{{cite journal   |vauthors=Hilpelä P, Oberbanscheidt P, Hahne P, etal |title=SWAP-70 identifies a transitional subset of actin filaments in motile cells. |journal=Mol. Biol. Cell |volume=14 |issue= 8 |pages= 3242–53 |year= 2004 |pmid= 12925760 |doi= 10.1091/mbc.E03-01-0043  | pmc=181564 }}
-*{{cite journal  | author=Rapalus L, Minegishi Y, Lavoie A, ''et al.'' |title=Analysis of SWAP-70 as a candidate gene for non-X-linked hyper IgM syndrome and common variable immunodeficiency. |journal=Clin. Immunol. |volume=101 |issue= 3 |pages= 270-5 |year= 2002 |pmid= 11726218 |doi= 10.1006/clim.2001.5116 }}
+*{{cite journal   |vauthors=Ota T, Suzuki Y, Nishikawa T, etal |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40–5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
-*{{cite journal  | author=Nakayama M, Kikuno R, Ohara O |title=Protein-protein interactions between large proteins: two-hybrid screening using a functionally classified library composed of long cDNAs. |journal=Genome Res. |volume=12 |issue= 11 |pages= 1773-84 |year= 2003 |pmid= 12421765 |doi= 10.1101/gr.406902 }}
+*{{cite journal   |vauthors=Gerhard DS, Wagner L, Feingold EA, etal |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504  | pmc=528928 }}
-*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
+*{{cite journal   |vauthors=Rual JF, Venkatesan K, Hao T, etal |title=Towards a proteome-scale map of the human protein-protein interaction network. |journal=Nature |volume=437 |issue= 7062 |pages= 1173–8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 }}
-*{{cite journal  | author=Hilpelä P, Oberbanscheidt P, Hahne P, ''et al.'' |title=SWAP-70 identifies a transitional subset of actin filaments in motile cells. |journal=Mol. Biol. Cell |volume=14 |issue= 8 |pages= 3242-53 |year= 2004 |pmid= 12925760 |doi= 10.1091/mbc.E03-01-0043 }}
+*{{cite journal   |vauthors=Kimura K, Wakamatsu A, Suzuki Y, etal |title=Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. |journal=Genome Res. |volume=16 |issue= 1 |pages= 55–65 |year= 2006 |pmid= 16344560 |doi= 10.1101/gr.4039406  | pmc=1356129 }}
-*{{cite journal  | author=Ota T, Suzuki Y, Nishikawa T, ''et al.'' |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40-5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
+*{{cite journal  | vauthors=Ihara S, Oka T, Fukui Y |title=Direct binding of SWAP-70 to non-muscle actin is required for membrane ruffling. |journal=J. Cell Sci. |volume=119 |issue= Pt 3 |pages= 500–7 |year= 2006 |pmid= 16418221 |doi= 10.1242/jcs.02767 }}
-*{{cite journal  | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
+*{{cite journal   |vauthors=Kimbara N, Dohi N, Miyamoto M, etal |title=Diagnostic surface expression of SWAP-70 on HIV-1 infected T cells. |journal=Microbiol. Immunol. |volume=50 |issue= 3 |pages= 235–42 |year= 2006 |pmid= 16547421 |doi=  10.1111/j.1348-0421.2006.tb03790.x}}
-*{{cite journal  | author=Rual JF, Venkatesan K, Hao T, ''et al.'' |title=Towards a proteome-scale map of the human protein-protein interaction network. |journal=Nature |volume=437 |issue= 7062 |pages= 1173-8 |year= 2005 |pmid= 16189514 |doi= 10.1038/nature04209 }}
+*{{cite journal   |vauthors=Liu J, Li D, Cao B, etal |title=Expression and localization of SWAP-70 in human fetomaternal interface and placenta during tubal pregnancy and normal placentation. |journal=J. Histochem. Cytochem. |volume=55 |issue= 7 |pages= 701–8 |year= 2007 |pmid= 17371938 |doi= 10.1369/jhc.6A7151.2007 }}
-*{{cite journal  | author=Kimura K, Wakamatsu A, Suzuki Y, ''et al.'' |title=Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. |journal=Genome Res. |volume=16 |issue= 1 |pages= 55-65 |year= 2006 |pmid= 16344560 |doi= 10.1101/gr.4039406 }}
-*{{cite journal  | author=Ihara S, Oka T, Fukui Y |title=Direct binding of SWAP-70 to non-muscle actin is required for membrane ruffling. |journal=J. Cell. Sci. |volume=119 |issue= Pt 3 |pages= 500-7 |year= 2006 |pmid= 16418221 |doi= 10.1242/jcs.02767 }}
-*{{cite journal  | author=Kimbara N, Dohi N, Miyamoto M, ''et al.'' |title=Diagnostic surface expression of SWAP-70 on HIV-1 infected T cells. |journal=Microbiol. Immunol. |volume=50 |issue= 3 |pages= 235-42 |year= 2006 |pmid= 16547421 |doi=  }}
-*{{cite journal  | author=Liu J, Li D, Cao B, ''et al.'' |title=Expression and localization of SWAP-70 in human fetomaternal interface and placenta during tubal pregnancy and normal placentation. |journal=J. Histochem. Cytochem. |volume=55 |issue= 7 |pages= 701-8 |year= 2007 |pmid= 17371938 |doi= 10.1369/jhc.6A7151.2007 }}
-}}
 {{refend}}
-{{protein-stub}}
+{{PDB Gallery|geneid=23075}}
-{{WikiDoc Sources}}
+{{gene-11-stub}}

SWAP70: Difference between revisions

Latest revision as of 20:55, 8 November 2017

References

Further reading

Navigation menu