Non-degenerate nucleotides per response element

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Tabulation of counts

Number of non-degenerate nucleotides versus number of response elements
Number of nucleotides Letters of nucleotides Number of response elements Average ± deviation Order of list Present or Absent
1 A 295 295.0 ± 0.0 1 Present
1 T 285 - 1 Present
1 G 286 - 3 Present
1(4) C 300 291.5 ± 6 5, 134 Absent, Present
2 AA 105 105 ± 0.0 1 Present
2 AT 105 105 ± 0.0 1 Present
2 TA 74 - 1 Present
2 AC 103 - 5 Absent
2 CG 102 - 5 Absent
2 CA 136 - 7 Present
2 TG 112 - 7 Present
2 AG 63 - 8 Present
2 CC 101 - 8 Present
2 GC 74 - 8 Present
2 CT 67 - 11 Absent
2 GG 92 - 12 Absent
2 GT 106 - 12 Absent
2 TT 91 - 12 Absent
2 TC 122 - 14 Absent
2(16) GA 106 97.4 ± 15.5 16 Absent
3 TAT 20 20.0 ± 0.0 1 Present
3 ATA 23 - 1 Present
3 TAA 24 - 1 Present
3 AAA 35 - 1 Present
3 AAC 22 - 5, 80 Absent, Present
3 ACG 39 - 5 Absent
3 AGC 8 - 8 Present
3 GCC 30 - 8 Present
3 CCG 21 - 8 Present
3 CTA 11 - 11 Absent
3 ACC 25 - 11 Absent
3 GTT 17 - 12 Absent
3 GGC 25 - 12 Absent
3 TTG 13 - 12 Absent
3 GCA 10 - 12 Absent
3 CAA 24 - 12 Absent
3 TGG 19 - 12 Absent
3 CAT 32 - 12 Absent
3 ATG 17 - 12 Absent
3 CCA 36 - 14 Absent
3 AAT 23 - 14 Absent
3 ATC 25 - 14 Absent
3 TTA 16 - 15 Absent
3 CCC 25 - 15 Absent
3 CCT 18 - 15 Absent
3 TAC 15 - 15 Absent
3 TTT 18 - 16 Absent
3 TCG 11 - 16 Absent
3 GGA 16 - 16 Absent
3 GCG 24 - 16 Absent
3 CGT 40 - 16 Absent
3 CGG 25 - 16 Absent
3 GAA 37 - 16 Absent
3 TTC 43 - 16 Absent
3 GGG 18 - 16 Absent
3 TCC 27 - 18 & 19 Absent
3 CAC 34 - 18 & 19 Absent
3 TGA 36 - 20 Absent
3 TCA 43 - 20 Absent
3 GAC 24 - 21 Absent
3 ACA 20 - 21 Absent
3 CGA 14 - 21 Absent
3 GTG 39 - 22 Absent
3 GGT 27 - 22 Absent
3(1092/45) GAT 24 24.21 ± 12.42 28 Absent
4 AAAA 6 6.0 ± 0.0 1 Present
4 TAAA 6 6.0 ± 0.0 1 Present
4 ATAA 10 7.33 ± 1.78 1 Present
4 TATA 8 7.5 ± 1.5 1 Present
4 AACG 4 6.8 ± 1.76 5 Absent
4 AGCC 2 6.0 ± 2.00 8 Present
4 GCCG 4 - 8 Present
4 CCGC 10 - 8 Present
4 CGCC 11 - 8 Present
4 CTAA 5 - 11 Absent
4 AACC 4 - 11 Absent
4 TAAC 6 - 11 Absent
4 GCAA 2 - 12 Absent
4 GTTG 3 - 12 Absent
4 TTGG 4 - 12 Absent
4 TGGC 6 - 12 Absent
4 GGCA 3 - 12 Absent
4 GCAT 5 - 12 Absent
4 CATG 7 - 12 Absent
4 ATGG 4 - 12 Absent
4 CAAC 3 - 12 Absent
4 CCAA 10 - 14 Absent
4 CCTT 2 - 15 Absent
4 TTAC 4 - 15 Absent
4 ACCC 7 - 15 Absent
4 CCCC 9 - 15 Absent
4 CCCT 10 - 15 Absent
4 TGGA 1 - 16 Absent
4 AAGC 1 - 16 Absent
4 TTTC 9 - 16 Absent
4 TTCG 4 - 16 Absent
4 TCGT 3 - 16 Absent
4 CGTT 3 - 16 Absent
4 GTTG 3 - 16 Absent
4 GGAA 4 - 16 Absent
4 GAAG 2 - 16 Absent
4 AGCG 2 - 16 Absent
4 GCGG 9 - 16 Absent
4 CGGG 4 - 16 Absent
4 GGGA 2 - 16 Absent
4 CCAC 12 - 18 & 19 Absent
4 TCCA 9 - 18 & 19 Absent
4 ATCC 6 - 18 & 19 Absent
4 TATC 6 - 18 & 19 Absent
4 ACCG 5 - 21 Absent
4 CCGA 3 - 21 Absent
4 CGAC 4 - 21 Absent
4 GACA 4 - 21 Absent
4 ACAT 4 - 21 Absent
4 AGTG 4 - 22 Absent
4 GAGT 4 - 22 Absent
4 GTGG 7 - 22 Absent
4 TGGT 4 - 22 Absent
4 GGTG 6 - 22 Absent
4 GTGA 8 - 22 Absent
4 GAGT 4 - 23 Absent
4 TGAG 5 - 23 Absent
4 AGTC 5 - 23 Absent
4 GTCA 12 - 23 Absent
4 TTCT 7 - 25 Absent
4 TCTC 6 - 25 Absent
4 CTCT 3 - 25 Absent
4 CGTA 4 - 26 Absent
4 ACGT 24 - 26 Absent
4 TACG 4 - 26 Absent
4 CGTG 27 - 27 Absent
4 GTGT 6 - 27 Absent
4 TGTC 7 - 27 Absent
4 GTCC 2 - 27 Absent
4 ATCG 2 - 28 Absent
4 CGAT 3 - 28 Absent
4 GATC 4 - 28 Absent
4 TCGA 4 - 28 Absent
4 ATGT 6 - 50 Absent
4 GTGA 7 - 137 Absent
4 TGAA 5 - 137 Absent
4 GAAA 14 - 137 Absent
4(33) AAAT 8 7.64 ± 2.63 137 Absent
5 ATAAA 3 0.0 ± 0.0 1 Present
5 TATAA 4 3.5 ± 0.5 1 Present
5 TAAAA 1 2.67 1 Present
5 AGCCG 1 2.25 8 Present
5 GCCGC 4 2.60 ± 1.28 8 Present
5 CCGCC 9 3.67 ± 2 8 Present
5 CTAAC 1 - 11 Absent
5 TAACC 2 - 11 Absent
5 GGCAT 1 - 12 Absent
5 ATGGC 1 - 12 Absent
5 GCAAC 1 - 12 Absent
5 TGGCA 2 - 12 Absent
5 GGCAA 2 - 12 Absent
5 GTTGG 2 - 12 Absent
5 TTGGC 2 - 12 Absent
5 GCATG 2 - 12 Absent
5 CATGG 2 - 12 Absent
5 CAATC 2 - 14 Absent
5 CCAAT 5 - 14 Absent
5 TTACC 3 - 15 Absent
5 TACCC 3 - 15 Absent
5 CCCTT 2 - 15 Absent
5 ACCCC 2 - 15 Absent
5 CCCCC 3 - 15 Absent
5 CCCCT 4 - 15 Absent
5 TTCGT 1 - 16 Absent
5 TCGTT 1 - 16 Absent
5 CGTTG 1 - 16 Absent
5 TTGGA 1 - 16 Absent
5 TGGAA 1 - 16 Absent
5 GAAGC 1 - 16 Absent
5 AAGCG 1 - 16 Absent
5 AGCGG 1 - 16 Absent
5 CGGGA 1 - 16 Absent
5 TTTCG 2 - 16 Absent
5 GGAAG 2 - 16 Absent
5 GCGGG 3 - 16 Absent
5 TATCC 5 - 18 & 19 Absent
5 ATCCA 5 - 18 & 19 Absent
5 TCCAC 5 - 18 & 19 Absent
5 TACCG 1 - 21 Absent
5 ACCGA 1 - 21 Absent
5 CGACA 1 - 21 Absent
5 CCGAC 2 - 21 Absent
5 GACAT 2 - 21 Absent
5 GAGTG 2 - 22 Absent
5 GTGGT 1 - 22 Absent
5 AGTGG 2 - 22 Absent
5 TGGTG 2 - 22 Absent
5 GGTGA 3 - 22 Absent
5 GAGTC 1 - 23 Absent
5 TGAGT 4 - 23 Absent
5 AGTCA 3 - 23 Absent
5 TTCTC 1 - 25 Absent
5 TCTCT 1 - 25 Absent
5 TACGT 3 - 26 Absent
5 ACGTA 3 - 26 Absent
5 TGTCC 1 - 27 Absent
5 ACGTG 15 - 27 Absent
5 CGTGT 5 - 27 Absent
5 GTGTC 3 - 27 Absent
5 CGATC 1 - 28 Absent
5 GATCG 1 - 28 Absent
5 CGATC 1 - 28 Absent
5 ATCGAT 2 - 28 Absent
5 TCGAT 2 - 28 Absent
5 ACGAT 1 - 31 Absent
5 TGTGA 2 3.43 ± 1.92 137 Absent
5 GTGAA 3 3.38 ± 1.72 137 Absent
5(28) ATGTG 3 3.33 ± 1.55 137 Absent
6 TATAAA 2 2.0 1 Present
6 ATAAAA 1 1.5 1 Present
6 AGCCGC 1 - 8 Present
6 GCCGCC 4 2.375 ± 1.563 8 Present
6 CTAACC 1 1.5 11 Absent
6 GTTGGC 1 - 12 Absent
6 TTGGCA 1 - 12 Absent
6 TGGCAT 1 - 12 Absent
6 GGCATG 1 - 12 Absent
6 GCATGG 1 - 12 Absent
6 CATGGC 1 - 12 Absent
6 ATGGCA 1 - 12 Absent
6 GGCAAC 1 - 12 Absent
6 TGGCAA 2 - 12 Absent
6 CCAATC 2 - 14 Absent
6 TACCCC 1 - 15 Absent
6 ACCCCC 1 - 15 Absent
6 CCCCCC 1 - 15 Absent
6 CCCCCT 1 - 15 Absent
6 TTACCC 3 - 15 Absent
6 CCCCTT 2 - 15 Absent
6 TTTCGT 1 - 16 Absent
6 TTCGTT 1 - 16 Absent
6 TCGTTG 1 - 16 Absent
6 CGTTGG 1 - 16 Absent
6 GTTGGA 1 - 16 Absent
6 TTGGAA 1 - 16 Absent
6 TGGAAG 1 - 16 Absent
6 GGAAGC 1 - 16 Absent
6 GAAGCG 1 - 16 Absent
6 AAGCGG 1 - 16 Absent
6 AGCGGG 1 - 16 Absent
6 GCGGGA 1 - 16 Absent
6 TATCCA 5 - 18 & 19 Absent
6 ATCCAC 5 - 18 & 19 Absent
6 TACCGA 1 - 21 Absent
6 ACCGAC 1 - 21 Absent
6 CCGACA 1 - 21 Absent
6 CGACAT 1 - 21 Absent
6 AGTGGT 1 - 22 Absent
6 GTGGTG 1 - 22 Absent
6 GAGTGG 2 - 22 Absent
6 TGGTGA 2 - 22 Absent
6 TGAGTC 1 - 23 Absent
6 GAGTCA 1 - 23 Absent
6 TTCTCT 1 - 25 Absent
6 TACGTA 1 - 26 Absent
6 GTGTCC 1 - 27 Absent
6 ACGTGT 3 - 27 Absent
6 CGTGTC 2 - 27 Absent
6 CGATCG 1 - 28 Absent
6 GATCGA 1 - 28 Absent
6 TCGATC 1 - 28 Absent
6 ATCGAT 2 - 28 Absent
6 ATGTGA 2 2.222 ± 1.592 137 Absent
6 TGTGAA 2 2.10 ± 1.35 137 Absent
6(24) TGAAAT 3 2.36 ± 1.32 137 Absent
7 TATAAAA 1 1.0 ± 0.0 1 Present
7 AGCCGCC 1 1.0 ± 0.0 8 Present
7 GTTGGCA 1 1.0 ± 0.0 12 Absent
7 TTGGCAT 1 1.0 ± 0.0 12 Absent
7 TGGCATG 1 1.0 ± 0.0 12 Absent
7 GGCATGG 1 1.0 ± 0.0 12 Absent
7 GCATGGC 1 1.0 ± 0.0 12 Absent
7 CATGGCA 1 1.0 ± 0.0 12 Absent
7 ATGGCAA 1 1.0 ± 0.0 12 Absent
7 TGGCAAC 1 1.0 ± 0.0 12 Absent
7 TTACCCC 1 1.0 ± 0.0 15 Absent
7 TACCCCC 1 1.0 ± 0.0 15 Absent
7 ACCCCCC 1 1.0 ± 0.0 15 Absent
7 CCCCCCC 1 1.0 ± 0.0 15 Absent
7 CCCCCCT 1 1.0 ± 0.0 15 Absent
7 CCCCCTT 1 1.0 ± 0.0 15 Absent
7 TTTCGTT 1 1.0 ± 0.0 16 Absent
7 TTCGTTG 1 1.0 ± 0.0 16 Absent
7 TCGTTGG 1 1.0 ± 0.0 16 Absent
7 CGTTGGA 1 1.0 ± 0.0 16 Absent
7 GTTGGAA 1 1.0 ± 0.0 16 Absent
7 TTGGAAG 1 1.0 ± 0.0 16 Absent
7 TGGAAGC 1 1.0 ± 0.0 16 Absent
7 GGAAGCG 1 1.0 ± 0.0 16 Absent
7 GAAGCGG 1 1.0 ± 0.0 16 Absent
7 AAGCGGG 1 1.0 ± 0.0 16 Absent
7 AGCGGGA 1 1.0 ± 0.0 16 Absent
7 TATCCAC 1 1.0 ± 0.0 18 & 19 Absent
7 TACCGAC 1 - 21 Absent
7 ACCGACA 1 - 21 Absent
7 CCGACAT 1 - 21 Absent
7 GAGTGGT 1 - 22 Absent
7 AGTGGTG 1 - 22 Absent
7 GTGGTGA 1 - 22 Absent
7 TGAGTCA 1 - 23 Absent
7 ACGTGTC 1 - 27 Absent
7 CGTGTCC 1 - 27 Absent
7 CGATCGA 1 - 28 Absent
7 GATCGAT 1 - 28 Absent
7 ATCGATC 1 - 28 Absent
7(28) GAGGCCA 1 1.0 33 Absent
7(28) AGGCCAT 1 1.0 33 Absent
7(28) GGCCATC 1 1.0 33 Absent
7(28) GCCATCT 1 1.0 33 Absent
7 ATGTGAA 2 - 137 Absent
7 TGTGAAA 2 - 137 Absent
7 GTGAAAT 2 - 137 Absent
7 TTCACAT 1 - 138 Present
7(22) TCACATG 1 1.14 ± 0.263 138 Present
8 GTTGGCAT 1 - 12 Absent
8 TTGGCATG 1 - 12 Absent
8 TGGCATGG 1 - 12 Absent
8 GGCATGGC 1 - 12 Absent
8 GCATGGCA 1 - 12 Absent
8 CATGGCAA 1 - 12 Absent
8 ATGGCAAC 1 - 12 Absent
8 TTACCCCC 1 1.0 15 Absent
8 TACCCCCC 1 1.0 15 Absent
8 ACCCCCCC 1 1.0 15 Absent
8 CCCCCCCT 1 1.0 15 Absent
8 CCCCCCTT 1 1.0 15 Absent
8 TTTCGTTG 1 1.0 16 Absent
8 TTCGTTGG 1 1.0 16 Absent
8 TCGTTGGA 1 1.0 16 Absent
8 CGTTGGAA 1 1.0 16 Absent
8 GTTGGAAG 1 1.0 16 Absent
8 TTGGAAGC 1 1.0 16 Absent
8 TGGAAGCG 1 1.0 16 Absent
8 GGAAGCGG 1 1.0 16 Absent
8 GAAGCGGG 1 1.0 16 Absent
8 AAGCGGGA 1 1.0 16 Absent
8 TACCGACA 1 - 21 Absent
8 ACCGACAT 1 - 21 Absent
8 GAGTGGTG 1 - 22 Absent
8 AGTGGTGA 1 - 22 Absent
8 ACGTGTCC 1 - 27 Absent
8 CGATCGAT 1 - 28 Absent
8 GATCGATC 1 - 28 Absent
8 ATGTGAAA 2 - 137 Absent
8 TGTGAAAT 2 - 137 Absent
8(26) GAGGCCAT 1 1.0 33 Absent
8(27) AGGCCATC 1 1.0 33 Absent
8(28) GGCCATCT 1 1.0 33 Absent
8(29) TTCACATG 1 1.2 ± 0.32 138 Present
9 CATGGCAAC 1 1.0 12 Absent
9 GCATGGCAA 1 1.0 12 Absent
9 GGCATGGCA 1 1.0 12 Absent
9 TGGCATGGC 1 1.0 12 Absent
9 TTGGCATGG 1 1.0 12 Absent
9 GTTGGCATG 1 1.0 12 Absent
9 TTACCCCCC 1 1.0 15 Absent
9 TACCCCCCC 1 1.0 15 Absent
9 ACCCCCCCT 1 1.0 15 Absent
9 CCCCCCCTT 1 1.0 15 Absent
9 TTTCGTTGG 1 1.0 16 Absent
9 TTCGTTGGA 1 1.0 16 Absent
9 TCGTTGGAA 1 1.0 16 Absent
9 CGTTGGAAG 1 1.0 16 Absent
9 GTTGGAAGC 1 1.0 16 Absent
9 TTGGAAGCG 1 1.0 16 Absent
9 TGGAAGCGG 1 1.0 16 Absent
9 GGAAGCGGG 1 1.0 16 Absent
9 GAAGCGGGA 1 1.0 16 Absent
9 TACCGACAT 1 - 21 Absent
9 GAGTGGTGA 1 - 22 Absent
9 CGATCGATC 1 - 28 Absent
9(21) ATGTGAAAT 2 1.14 ± 0.24 137 Absent
9(22) GAGGCCATC 1 1.0 33 Absent
9(23) AGGCCATCT 1 1.0 33 Absent
10(1) GCATGGCAAC 1 1.0 12 Absent
10(2) GGCATGGCAA 1 1.0 12 Absent
10(3) TGGCATGGCA 1 1.0 12 Absent
10(4) TTGGCATGGC 1 1.0 12 Absent
10(5) GTTGGCATGG 1 1.0 12 Absent
10(6) TTACCCCCCC 1 1.0 15 Absent
10(7) TACCCCCCCT 1 1.0 15 Absent
10(8) ACCCCCCCTT 1 1.0 15 Absent
10(9) TTTCGTTGGA 1 1.0 16 Absent
10(10) TTCGTTGGAA 1 1.0 16 Absent
10(11) TCGTTGGAAG 1 1.0 16 Absent
10(12) CGTTGGAAGC 1 1.0 16 Absent
10(13) GTTGGAAGCG 1 1.0 16 Absent
10(14) TTGGAAGCGG 1 1.0 16 Absent
10(15) TGGAAGCGGG 1 1.0 16 Absent
10(16) GGAAGCGGGA 1 1.0 16 Absent
10(17) GAGGCCATCT 1 1.0 33 Absent
11 GGCATGGCAAC 1 1.0 12 Absent
11 TGGCATGGCAA 1 1.0 12 Absent
11 TTGGCATGGCA 1 1.0 12 Absent
11 GTTGGCATGGC 1 1.0 12 Absent
11 TTACCCCCCCT 1 1.0 15 Absent
11 TACCCCCCCTT 1 1.0 15 Absent
11 TTTCGTTGGAA 1 1.0 16 Absent
11 TTCGTTGGAAG 1 1.0 16 Absent
11 TCGTTGGAAGC 1 1.0 16 Absent
11 CGTTGGAAGCG 1 1.0 16 Absent
11 GTTGGAAGCGG 1 1.0 16 Absent
11 TTGGAAGCGGG 1 1.0 16 Absent
11(13) TGGAAGCGGGA 1 1.0 16 Absent
12 TGGCATGGCAAC 1 1.0 12 Absent
12 TTGGCATGGCAA 1 1.0 12 Absent
12 GTTGGCATGGCA 1 1.0 12 Absent
12 TTACCCCCCCTT 1 1.0 15 Absent
12 TTTCGTTGGAAG 1 1.0 16 Absent
12 TTCGTTGGAAGC 1 1.0 16 Absent
12 TCGTTGGAAGCG 1 1.0 16 Absent
12 CGTTGGAAGCGG 1 1.0 16 Absent
12 GTTGGAAGCGGG 1 1.0 16 Absent
12(10) TTGGAAGCGGGA 1 1.0 16 Absent
13 TTGGCATGGCAAC 1 1.0 12 Absent
13 GTTGGCATGGCAA 1 1.0 12 Absent
13 TTTCGTTGGAAGC 1 1.0 16 Absent
13 TTCGTTGGAAGCG 1 1.0 16 Absent
13 TCGTTGGAAGCGG 1 1.0 16 Absent
13 CGTTGGAAGCGGG 1 1.0 16 Absent
13(7) GTTGGAAGCGGGA 1 1.0 16 Absent
14 GTTGGCATGGCAAC 1 1.0 12 Absent
14 TTTCGTTGGAAGCG 1 1.0 16 Absent
14 TTCGTTGGAAGCGG 1 1.0 16 Absent
14 TCGTTGGAAGCGGG 1 1.0 16 Absent
14(5) CGTTGGAAGCGGGA 1 1.0 16 Absent
15 TTTCGTTGGAAGCGG 1 1.0 16 Absent
15 TTCGTTGGAAGCGGG 1 1.0 16 Absent
15(3) TCGTTGGAAGCGGGA 1 1.0 16 Absent
16 TTCGTTGGAAGCGGGA 1 1.0 16 Absent
16(2) TTTCGTTGGAAGCGGG 1 1.0 16 Absent
17(1) TTTCGTTGGAAGCGGGA 1 1.0 16 Absent

Averages per Orders

Number of non-degenerate nucleotides versus number of response elements
Number of nucleotides (Totals) Letters of last Order nucleotides Number of last response elements Average ± average deviation Last Order of list
1(4) C 300 291.5 ± 6 5
2(16) GA 106 97.4 ± 15.5 16
3(38) CAC 34 29.9 ± 12.2 18
4(33) AAAT 8 7.64 ± 2.63 137
5(28) ATGTG 3 3.33 ± 1.55 137
6(24) TGAAAT 3 2.36 ± 1.32 137
7(21) TCACATG 1 1.23 ± 0.35 138
8(26) TTCACATG 1 1.2 ± 0.32 138
9(20) ATGTGAAAT 2 1.14 ± 0.24 137
10(16) GGAAGCGGGA 1 1.0 16
11(13) TGGAAGCGGGA 1 1.0 16
12(10) TTGGAAGCGGGA 1 1.0 16
13(7) GTTGGAAGCGGGA 1 1.0 16
14(5) GTTGGCATGGCAAC 1 1.0 16
15(3) TCGTTGGAAGCGGGA 1 1.0 16
16(2) TTTCGTTGGAAGCGGG 1 1.0 16
17(1) TTTCGTTGGAAGCGGGA 1 1.0 16
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