Helicobacter pylori infection diagnostic tests: Difference between revisions
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|*1. Histology | |*1. Histology | ||
|Excellent sensitivity and specificity | |Excellent sensitivity (>95%) and specificity (95%) | ||
|Expensive and requires infrastructure and trained personnel | | | ||
* Expensive and requires infrastructure and trained personnel | |||
* Detection improved by use of special stains- e.g. the Warhin-Starry silver stain, or the cheaper Giemsa staining protocol | |||
|- | |- | ||
|*2. Rapid urease testing | |*2. Rapid urease testing | ||
|Inexpensive and provides rapid results. Excellent specificity and very good sensitivity in properly selected patients | |Inexpensive and provides rapid results. Excellent specificity (98%) and very good sensitivity in properly selected patients. Excellent specificity (99%) | ||
|Sensitivity significantly reduced in the posttreatment setting | | | ||
* Sensitivity significantly reduced in the posttreatment setting | |||
* Rapid and cheap | |||
|- | |- | ||
|*3. Culture | |*3. Culture | ||
|Excellent specificity. Allows determination of antibiotic sensitivities | |Excellent specificity. Allows determination of antibiotic sensitivities | ||
|Expensive, difficult to perform | | | ||
* Expensive, difficult to perform and not widely available. | |||
* Highly specific; poor sensitivity if adequate transport media are not available | |||
* Experience/ expertise required | |||
|- | |- | ||
|*4. Polymerase chain reaction | |*4. Polymerase chain reaction | ||
|Excellent sensitivity and specificity. Allows determination of antibiotic sensitivities | |Excellent sensitivity and specificity. Allows determination of antibiotic sensitivities | ||
|Methodology not standardized across laboratories and not widely available | | | ||
* Methodology not standardized across laboratories and not widely available | |||
* Sensitive and specific | |||
* Considered experimental | |||
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==References== | ==References== | ||
{{Reflist|2}} | {{Reflist|2}} |
Revision as of 19:32, 18 January 2017
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Editor-In-Chief: C. Michael Gibson, M.S., M.D. [1] Associate Editor(s)-in-Chief: Yamuna Kondapally, M.B.B.S[2]
Overview
Endoscopic Diagnostic Tests
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Endoscopic diagnostic tests are biopsy-based diagnostic methods for H.pylori infection. This include:
- Histology
- Rapid urease testing
- Culture
- Polymerase chain reaction
Histology
- Histology for H.pylori detection depends on:
- Site, number, and size of gastric biopsies
- Method of staining
- Level of experience of the examining pathologist
- Advantage of histology over other diagnostic studies is its ability to detect the pathological changes associated with H.pylori infection such as inflammation, atrophy, intestinal metaplasia, and malignancy.
- Multiple biopsies are required for accurate diagnosis as the prevalence and density of H.pylori varies throughout the stomach. Therefore a minimum of three biopsies is taken from different sites. They are:
- Angularis
- Greater curvature of the corpus
- Greater curvature of the antrum
- The sensitivity of histology is greatly affected by the use of medications such as bismuth, antibiotics, and PPI.
Rapid Urease Testing (RUT)
- Identifies active H.pylori infection through the organism's urease activity.
- Procedure
- The gastric biopsies obtained are placed into an agar gel or on a reaction strip containing urea, a buffer, and a pH-sensitive indicator.
- The urea is metabolized to ammonia and bicarbonate in the presence of H.pylori's urease leading to a pH increase in the microenvironment of the organism.
- A change in color of the pH sensitive indicator signifies the presence of the active infection.
- The sensitivity of the RUT decreases due to medications such as bismuth-containing compounds, antibiotics, or PPIs which reduce the density and/or urease activity of H.pylori.
- It is recommended that biopsies are taken from two sites due to the patchy distribution of H.pylori infection after antibiotics use. The sites include:
- The body at the gastric angularis
- Greater curvature of the antrum
- PPIs are withheld for 1-2 wk before the performance of RUT as they reduce the sensitivity of the test.
Culture
- Culture is not as sensitive as RUT or histology.
- Highly specific method for identifying active H.pylori infection.
- It is also used to determine antibiotic sensitivities and resistance.
Polymerase Chain Reaction (PCR)
- PCR is highly specific and more sensitive than other biopsy-based diagnostic techniques.
- It is also used to identify mutations associated with antimicrobial resistance.
- This method is not standardized across laboratories
Endoscopic testing | Advantages | Disadvantages |
---|---|---|
*1. Histology | Excellent sensitivity (>95%) and specificity (95%) |
|
*2. Rapid urease testing | Inexpensive and provides rapid results. Excellent specificity (98%) and very good sensitivity in properly selected patients. Excellent specificity (99%) |
|
*3. Culture | Excellent specificity. Allows determination of antibiotic sensitivities |
|
*4. Polymerase chain reaction | Excellent sensitivity and specificity. Allows determination of antibiotic sensitivities |
|