View source for Complex locus A1BG and ZNF497

Alpha-1-B glycoprotein is a 54.3 kDa protein in humans that is encoded by the A1BG gene.<ref name="entrez">{{ cite web
| title = Entrez Gene: Alpha-1-B glycoprotein
| url = https://www.ncbi.nlm.nih.gov/sites/entrez?db=gene&cmd=retrieve&list_uids=1
| accessdate = 2012-11-09 }}</ref> The protein encoded by this gene is a plasma glycoprotein of unknown function. The protein shows sequence similarity to the variable regions of some immunoglobulin supergene family member proteins.

A1BG is located on the negative DNA strand of [[chromosome 19]] from 58,858,172 – 58,864,865.<ref name="A1BG alpha-1-B glycoprotein">{{ cite web
|title=A1BG alpha-1-B glycoprotein
|url=https://www.ncbi.nlm.nih.gov/gene/1
|accessdate=May 10, 2013 }}</ref> Additionally, A1BG is located directly adjacent to the ZSCAN22 gene (58,838,385-58,853,712) on the positive DNA strand, as well as the ZNF837 (58,878,990 - 58,892,389, complement) and ZNF497 (58865723 - 58,874,214, complement) genes on the negative strand.<ref name="A1BG alpha-1-B glycoprotein"/>

==ZSCAN22==
{{main|ZSCAN22}}
# Gene ID: 342945 is ZSCAN22 zinc finger and SCAN domain containing 22.<ref name=HGNC2019>{{ cite web
|author=HGNC2019
|title=ZSCAN22 zinc finger and SCAN domain containing 22 [ Homo sapiens (human) ]
|publisher=National Center for Biotechnology Information
|location=U.S. National Library of Medicine, 8600 Rockville Pike, Bethesda MD, 20894 USA
|date=10 December 2019
|url=https://www.ncbi.nlm.nih.gov/gene/342945
|accessdate=2019-12-18 }}</ref> ZSCAN22 is transcribed in the negative direction from LOC100887072.<ref name=HGNC2019/>
# Gene ID: 102465484 is MIR6806.<ref name=HGNCMIR6806>{{ cite web
|author=HGNC2019
|title=MIR6806 microRNA 6806 [ Homo sapiens (human) ]
|publisher=National Center for Biotechnology Information
|location=U.S. National Library of Medicine, 8600 Rockville Pike, Bethesda MD, 20894 USA
|date=10 December 2019
|url=https://www.ncbi.nlm.nih.gov/gene/102465484
|accessdate=2019-12-18 }}</ref> MIR6806 is transcribed in the negative direction from LOC105372480.<ref name=HGNCMIR6806/>

==Alpha-1-B glycoprotein==
{{main|Alpha-1-B glycoprotein}}
'''Def.''' "a substance that induces an immune response, usually foreign"<ref name=AntigenWikt>{{ cite web
|author=[[wikt:User:Jag123|Jag123]]
|title=antigen
|publisher=Wikimedia Foundation, Inc
|location=San Francisco, California
|date=7 March 2005
|url=https://en.wiktionary.org/wiki/antigen
|accessdate=7 March 2020 }}</ref> is called an '''antigen'''.

'''Def.''' any "substance that elicits [an] immune response"<ref name=ImmunogenWikt>{{ cite web
|author=[[wikt:User:SemperBlotto|SemperBlotto]]
|title=immunogen
|publisher=Wikimedia Foundation, Inc
|location=San Francisco, California
|date=21 April 2008
|url=https://en.wiktionary.org/wiki/immunogen
|accessdate=8 March 2020 }}</ref> is called an '''immunogen'''.

An antigen "or immunogen is a molecule that sometimes stimulates an immune system response."<ref name=AntigenWikidoc>{{ cite web
|author=[[User:C. Michael Gibson|C. Michael Gibson]]
|title=Antigen
|publisher=WikiDoc Foundation
|location=Boston, Massachusetts
|date=27 April 2008
|url=https://www.wikidoc.org/index.php/Antigen
|accessdate=8 March 2020 }}</ref> But, "the immune system does not consist of only antibodies",<ref name=AntigenWikidoc/> instead it "encompasses all substances that can be recognized by the [[adaptive immune system]]."<ref name=AntigenWikidoc/>

'''Def.''' "a protein produced by B-lymphocytes that binds to an [a specific]<ref name=AntibodyWikt1>{{ cite web
|author=[[wikt:User:Williamsayers79|Williamsayers79]]
|title=antibody
|publisher=Wikimedia Foundation, Inc
|location=San Francisco, California
|date=26 February 2007
|url=https://en.wiktionary.org/wiki/antibody
|accessdate=7 March 2020 }}</ref> antigen"<ref name=AntibodyWikt>{{ cite web
|author=[[wikt:User:Jag123|Jag123]]
|title=antibody
|publisher=Wikimedia Foundation, Inc
|location=San Francisco, California
|date=7 March 2005
|url=https://en.wiktionary.org/wiki/antibody
|accessdate=7 March 2020 }}</ref> is called an '''[[antibody]]'''.

Five different antibody isotypes are known in mammals, which perform different roles, and help direct the appropriate immune response for each different type of foreign object they encounter.<ref name=Market>Eleonora Market, F. Nina Papavasiliou (2003) [http://biology.plosjournals.org/perlserv/?request=get-document&doi=10.1371/journal.pbio.0000016 ''V(D)J Recombination and the Evolution of the Adaptive Immune System''] PLoS Biology 1(1): e16.</ref>

Although the general structure of all antibodies is very similar, a small region, known as the hypervariable region, at the tip of the protein is extremely variable, allowing millions of antibodies with slightly different tip structures to exist, where each of these variants can bind to a different target, known as an antigen.<ref name=Janeway5>{{ cite book | author = Charles A. Janeway, Jr ''et al'' | title = Immunobiolog. | edition = 5th ed. | publisher = Garland Publishing | date = 2001 | url = http://www.ncbi.nlm.nih.gov/books/bv.fcgi?call=bv.View..ShowTOC&rid=imm.TOC&depth=10 | isbn = 0-8153-3642-X }}</ref>

'''Def.''' "any of the glycoproteins in blood serum that respond to invasion by foreign antigens and that protect the host by removing pathogens;"<ref name=ImmunoglobulinWikt>{{ cite web
|author=[[wikt:User:SemperBlotto|SemperBlotto]]
|title= immunoglobulin
|publisher=Wikimedia Foundation, Inc
|location=San Francisco, California
|date=25 February 2006
|url=https://en.wiktionary.org/wiki/immunoglobulin
|accessdate=7 March 2020 }}</ref> "an antibody"<ref name=ImmunoglobulinWikt1>{{ cite web
|author=[[wikt:User:SemperBlotto|SemperBlotto]]
|title= immunoglobulin
|publisher=Wikimedia Foundation, Inc
|location=San Francisco, California
|date=28 April 2008
|url=https://en.wiktionary.org/wiki/immunoglobulin
|accessdate=7 March 2020 }}</ref> is called an '''[[immunoglobulin]]'''.

# Gene ID: 1 is [[Alpha-1-B glycoprotein]], a 54.3 kDa [[protein]] in humans that is encoded by the A1BG [[gene]].<ref name=RefSeqJuly2008>{{ cite web
|author=RefSeqJuly2008
|title=A1BG alpha-1-B glycoprotein [ Homo sapiens (human) ]
|publisher=National Center for Biotechnology Information
|location=U.S. National Library of Medicine, 8600 Rockville Pike, Bethesda MD, 20894 USA
|date=10 December 2019
|url=https://www.ncbi.nlm.nih.gov/gene/1
|accessdate=2019-12-18 }}</ref> A1BG is transcribed in the positive direction from ZNF497.<ref name=RefSeqJuly2008/> The protein encoded by this gene is a plasma glycoprotein of unknown function. The protein shows sequence similarity to the variable regions of some immunoglobulin supergene family member proteins. Patients who have pancreatic ductal [[adenocarcinoma]] show an [[overexpression]] of A1BG in [[pancreatic juice]].<ref name="pmid18706098">{{ cite journal |vauthors=Tian M, Cui YZ, Song GH, Zong MJ, Zhou XY, Chen Y, Han JX | title = Proteomic analysis identifies MMP-9, DJ-1 and A1BG as overexpressed proteins in pancreatic juice from pancreatic ductal adenocarcinoma patients | journal = BMC Cancer | volume = 8 | issue = | pages = 241 | year = 2008 | pmid = 18706098 | pmc = 2528014 | doi = 10.1186/1471-2407-8-241 }}</ref>
# Gene ID: 503538 is A1BG-AS1 A1BG antisense RNA 1.<ref name=HGNC122019/> A1BG-AS1 is transcribed in the negative direction from ZSCAN22.<ref name=HGNC122019/>

===Immunoglobulin supergene family===

"𝛂<sub>1</sub>B-glycoprotein(𝛂<sub>1</sub>B) [...] consists of a single polypeptide chain N-linked to four
glucosamine oligosaccharides. The polypeptide has five intrachain disulfide bonds and contains 474 amino acid residues. [...] 𝛂<sub>1</sub>B exhibits internal duplication and consists of five repeating structural domains, each containing about 95 amino acids and one disulfide bond. [...] several domains of 𝛂<sub>1</sub>B, especially the third, show statistically significant homology to variable regions of certain immunoglobulin light and heavy chains. 𝛂<sub>1</sub>B [...] exhibits sequence similarity to other members of the immunoglobulin supergene family such as the receptor for transepithelial transport of IgA and IgM and the secretory component of human IgA."<ref name=Ishioka>{{ cite journal
|author=Noriaki Ishioka, Nobuhiro Takahashi, and Frank W. Putnam
|title=Amino acid sequence of human plasma 𝛂<sub>1</sub>B-glycoprotein: Homology to the immunoglobulin supergene family
|journal=Proceedings of the National Academy of Sciences USA
|date=April 1986
|volume=83
|issue=8
|pages=2363-7
|url=https://www.ncbi.nlm.nih.gov/pmc/articles/PMC323297/pdf/pnas00312-0089.pdf
|arxiv=
|bibcode=
|doi=10.1073/pnas.83.8.2363
|pmid=3458201
|accessdate=9 March 2020 }}</ref>

"Some of the domains of 𝛂<sub>1</sub>B show significant homology to variable (V) and constant (C) regions of certain immunoglobulins. Likewise, there is statistically significant homology between 𝛂<sub>1</sub>B and the secretory component (SC) of human IgA (15) and also with the extracellular portion of the rabbit receptor for transepithelial transport of polymeric immunoglobulins (IgA and IgM). Mostov et al. (16) have called the later protein the poly-Ig receptor or poly-IgR and have shown that it is the precursor of SC."<ref name=Ishioka/>

The immunoglobulin supergene family is "the group of proteins that have immunoglobulin-like domains, including histocompatibility antigens, the T-cell antigen receptor, poly-IgR, and other proteins involved in the vertebrate immune response (17)."<ref name=Ishioka/>

"The internal homology in primary structure [...] and the presence of an intrasegment disulfide bond suggest that 𝛂<sub>1</sub>B is composed of five structural domains that arose by duplication of a primordial gene coding for about 95 amino acid residues."<ref name=Ishioka/>

"Unlike immunoglobulins (25), ceruloplasmin (6), and hemopexin (7), 𝛂<sub>1</sub>B is not subject to limited interdomain cleavage by proteolytic enzymes. At least, we were not able to produce such fragments by use of a variety of proteases. This stability of 𝛂<sub>1</sub>B is probably associated with the frequency of proline in the sequences linking the domains [...]."<ref name=Ishioka/>

"A peptide identified in the late and early milk proteomes showed homology to eutherian alpha 1B glycoprotein (A1BG), a plasma protein with unknown function<sup>46</sup>, as well as venom inhibitors characterised in the Southern opossum ''Didelphis marsupialis'' (DM43 and DM46<sup>47,48,49</sup>), all members of the immunoglobulin superfamily. To characterise the relationship between the peptide sequence identified in koala, A1BG, DM43 and DM46, a phylogenetic tree was constructed [...] including all marsupial and monotreme homologs (identified by BLAST), three phylogenetically representative eutherian sequences, with human IGSF1 and TARM1, related members of the immunoglobulin super family, used as outgroups. This phylogeny indicates that A1BG-like proteins in marsupials and the ''Didelphis'' antitoxic proteins are homologs of eutherian A1BG, with excellent bootstrap support (98%). The marsupial A1BG-like sequences and the ''Didelphis'' antitoxic proteins formed a single clade with strong bootstrap support (97%)."<ref name=Morris>{{ cite journal
|author=Katrina M. Morris, Denis O’Meally, Thiri Zaw, Xiaomin Song, Amber Gillett, Mark P. Molloy, Adam Polkinghorne, and Katherine Belova
|title=Characterisation of the immune compounds in koala milk using a combined transcriptomic and proteomic approach
|journal=Scientific Reports
|date=7 October 2016
|volume=6
|issue=
|pages=35011
|url=https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5054531/
|arxiv=
|bibcode=
|doi=10.1038/srep35011
|pmid=27713568
|accessdate=14 March 2020 }}</ref>

"Human TARM1 and IGSF1, related members of the immunoglobulin superfamily are used as outgroups. The tree was constructed using the maximum likelihood approach and the JTT model with bootstrap support values from 500 bootstrap tests. Bootstrap values less than 50% are not displayed. Accession numbers: Tasmanian devil (''Sarcophilus harrisii''; XP_012402143), Wallaby (''Macropus eugenii''; FY619507), Possum (''Trichosurus vulpecula''; DY596639) Virginia opossum (''Didelphis virginiana''; AAA30970, AAN06914), Southern opossum (''Didelphis marsupialis''; AAL82794, P82957, AAN64698), Human (''Homo sapiens''; P04217, B6A8C7, Q8N6C5), Platypus (''Ornithorhychus anatinus''; ENSOANP00000000762), Cow (''Bos taurus''; Q2KJF1), Alpaca (''Vicugna pacos''; XP_015107031)."<ref name=Morris/>

===A1BG protein species===

The gene contains 20 distinct introns.<ref name=AceView>{{ cite web
|title=AceView: A1BG
|url=https://www.ncbi.nlm.nih.gov/IEB/Research/Acembly/av.cgi?db=human&term=a1bg&submit=Go
|accessdate=May 11, 2013 }}</ref> Transcription produces 15 different mRNAs, 10 alternatively spliced variants and 5 unspliced forms.<ref name="AceView"/> There are 4 probable alternative promoters, 4 non overlapping alternative last exons and 7 validated alternative polyadenylation sites.<ref name="AceView"/> The mRNAs appear to differ by truncation of the 5' end, truncation of the 3' end, presence or absence of 4 cassette exons, overlapping exons with different boundaries, splicing versus retention of 3 introns.<ref name="AceView"/>

====Variants or isoforms====

Regarding additional isoforms, mention has been made of "new genetic variants of A1BG."<ref name=Eiberg>{{ cite journal
|author=H Eiberg, ML Bisgaard, J Mohr
|title=Linkage between alpha 1B-glycoprotein (A1BG) and Lutheran (LU) red blood group system: assignment to chromosome 19: new genetic variants of A1BG
|journal=Clinical genetics
|date=1 December 1989
|volume=36
|issue=6
|pages=415-8
|url=http://europepmc.org/abstract/MED/2591067
|arxiv=
|bibcode=
|doi=
|pmid=2591067
|accessdate=2017-10-08 }}</ref>

"Proteomic analysis revealed that [a circulating] set of plasma proteins was α 1 B-glycoprotein ('''A1BG''') and its
post-translationally modified isoforms."<ref name=Stehle>{{ cite journal
|author=John R. Stehle Jr., Mark E. Weeks, Kai Lin, Mark C. Willingham, Amy M. Hicks, John F. Timms, Zheng Cui
|title=Mass spectrometry identification of circulating alpha-1-B glycoprotein, increased in aged female C57BL/6 mice
|journal=Biochimica et Biophysica Acta (BBA) - General Subjects
|date=January 2007
|volume=1770
|issue=1
|pages=79-86
|url=http://www.sciencedirect.com/science/article/pii/S0304416506001826
|arxiv=
|bibcode=
|doi=
|pmid=
|accessdate=2017-10-08 }}</ref>

Pharmacogenomic variants have been reported.<ref name=McDonough/>

====Genotypes====

'''Def.''' the "part (DNA sequence) of the genetic makeup of an organism which determines a specific characteristic (phenotype) of that organism"<ref name=GenotypeWikt1>{{ cite web
|author=[[wikt:User:DTLHS|DTLHS]]
|title=genotype
|publisher=Wikimedia Foundation, Inc
|location=San Francisco, California
|date=10 January 2018
|url=https://en.wiktionary.org/wiki/genotype
|accessdate=25 March 2020 }}</ref> or a "group of organisms having the same genetic constitution" <ref name=GenotypeWikt>{{ cite web
|author=[[wikt:User:SemperBlotto|SemperBlotto]]
|title=genotype
|publisher=Wikimedia Foundation, Inc
|location=San Francisco, California
|date=22 October 2005
|url=https://en.wiktionary.org/wiki/genotype
|accessdate=25 March 2020 }}</ref>is called a '''genotype'''.

There are A1BG genotypes.<ref name=McDonough>{{ cite journal
|author=Caitrin W. McDonough, Yan Gong, Sandosh Padmanabhan, Ben Burkley, Taimour Y. Langaee, Olle Melander, Carl J. Pepine, Anna F. Dominiczak, Rhonda M. Cooper-DeHoff, Julie A. Johnson
|title=Pharmacogenomic Association of Nonsynonymous SNPs in SIGLEC12, A1BG, and the Selectin Region and Cardiovascular Outcomes
|journal=Hypertension
|date=June 2013
|volume=62
|issue=1
|pages=48-54
|url=http://hyper.ahajournals.org/content/hypertensionaha/early/2013/05/20/HYPERTENSIONAHA.111.00823.full.pdf
|arxiv=
|bibcode=
|doi=10.1161/HYPERTENSIONAHA.111.00823
|pmid=23690342
|accessdate=2017-10-08 }}</ref>

A1BG has a genetic risk score of rs893184.<ref name=McDonough/>

"A genetic risk score, including rs16982743, rs893184, and rs4525 in F5, was significantly associated with treatment-related adverse cardiovascular outcomes in whites and Hispanics from the INVEST study and in the Nordic Diltiazem study (meta-analysis interaction P=2.39×10<sup>−5</sup>)."<ref name=McDonough/>

====Polymorphs====

'''Def.''' the "regular existence of two or more different genotypes within a given species or population; also, variability of amino acid sequences within a gene's protein"<ref name=PolymorphismWikt>{{ cite web
|author=[[wikt:User:Widsith|Widsith]]
|title=polymorphism
|publisher=Wikimedia Foundation, Inc
|location=San Francisco, California
|date=28 March 2012
|url=https://en.wiktionary.org/wiki/polymorphism
|accessdate=25 March 2020 }}</ref> is called '''polymorphism'''.

"rs893184 causes a histidine (His) to arginine (Arg) [nonsynonymous single nucleotide polymorphism (nsSNP), A (minor) for G (major)] substitution at amino acid position 52 in A1BG."<ref name=McDonough/>

"Genetic polymorphism of human plasma (serum) alpha 1B-glycoprotein (alpha 1B) was observed using one-dimensional horizontal polyacrylamide gel electrophoresis (PAGE) pH 9.0 of plasma samples followed by Western blotting with specific antiserum to alpha 1B."<ref name=Gahne>{{ cite journal
|author=B. Gahne, R. K. Juneja, and A. Stratil
|title=Genetic polymorphism of human plasma alpha 1B-glycoprotein: phenotyping by immunoblotting or by a simple method of 2-D electrophoresis
|journal=Human Genetics
|date=June 1987
|volume=76
|issue=2
|pages=111-5
|url=https://link.springer.com/article/10.1007%2FBF00284904
|arxiv=
|bibcode=
|doi=10.1007/bf00284904
|pmid=3610142
|accessdate=25 March 2020 }}</ref>

"Genetic polymorphism of human plasma 𝜶<sub>1</sub>B-glycoprotein (𝜶<sub>1</sub>B) was reported first, in brief, by Altland ''et al.'' [1983; also given in Altkand and Hacklar, 1984]. A detailed description of human 𝜶<sub>1</sub>B polymorphism was reported in subsequent studies [Gahne ''et al.'', 1987; Juneja ''et al.'', 1988, 1989]. Five different 𝜶<sub>1</sub>B alleles (''A1B*1, A1B*2, A1B*3, A1B*4'' and ''A1B*5'') were reported. In Caucasian whites, the frequencies of ''A1B*1'' and ''''A1B*2'' were about 0.95 and 0.05, respectively. ''A1B*4'' was observed in 2 related Czech individuals. In American blacks, ''A1B*1'' and ''A1B*2'' occurred with a frequency of 0.73 and 0.21, respectively, while a new allele, viz, ''A1B*3'' had a frequency of 0.06. ''A1B*5'' was observed only in Swedish Lapps and in Finns with a frequency of 0.04 and 0.007, respectively."<ref name=Juneja>{{ cite journal
|author=R.K. Juneja, N. Saha, B. Gahne and J.S.H. Tay
|title=Distribution of Plasma Alpha-1-B-Glycoprotein Phenotypes in Several Mongoloid Populations of East Asia
|journal=Human Heredity
|date=1989
|volume=39
|issue=
|pages=218-222
|url=https://www.karger.com/Article/PDF/153863
|arxiv=
|bibcode=
|doi=10.1159/000153863
|pmid=
|accessdate=25 March 2020 }}</ref>

"The frequency of ''A1B*1'' varied from 0.89 to 0.91 and that of ''A1B*2'' from 0.08 to 0.10. The ''A1B*3'' allele, reported previously only in American blacks, was observed with a frequency range of 0.003-0.01 in 3 of the Chinese populations, in Koreans and in Malays. A new 𝜶<sub>1</sub>B allele (''A1B*6'') was observed in 2 Chinese individuals."<ref name=Juneja/>

====Phenotypes====

'''Def.''' the "appearance of an organism based on a single trait [multifactorial combination of genetic traits and environmental factors]<ref name=PhenotypeWikt2>{{ cite web
|author=[[wikt:User:24.235.196.118|24.235.196.118]]
|title=phenotype
|publisher=Wikimedia Foundation, Inc
|location=San Francisco, California
|date=23 September 2007
|url=https://en.wiktionary.org/wiki/phenotype
|accessdate=2016-10-04 }}</ref>, especially used in pedigrees"<ref name=PhenotypeWikt1>{{ cite web
|author=[[wikt:User:SemperBlotto|SemperBlotto]]
|title=phenotype
|publisher=Wikimedia Foundation, Inc
|location=San Francisco, California
|date=14 February 2005
|url=https://en.wiktionary.org/wiki/phenotype
|accessdate=2016-10-04 }}</ref> or any "observable characteristic of an organism, such as its morphological, developmental, biochemical or physiological properties, or its behavior"<ref name=PhenotypeWikt>{{ cite web
|author=[[wikt:User:N2e|N2e]]
|title=phenotype
|publisher=Wikimedia Foundation, Inc
|location=San Francisco, California
|date=3 July 2008
|url=https://en.wiktionary.org/wiki/phenotype
|accessdate=2016-10-04 }}</ref> is called a '''phenotype'''.

"The three different phenotypes of α1B observed (designated 1-1, 1-2, and 2-2) were apparently identical to those reported by Altland et al. (1983), who used double one-dimensional electrophoresis. Family data supported the hypothesis that the three α1B phenotypes are determined by two codominant alleles at an autosomal locus, designated A1B. Allele frequencies in a Swedish population were: A1B *1, 0.937; A1B *2, 0.063; PIC, 0.111."<ref name=Gahne/>

====Protein species====

"Both protein species of [alpha 1-beta glycoprotein] A1B (A1Ba, p = 0.008; f.c.= +1.62, A1Bb, p = 0.003; f.c. = +1.82) [...] were apparently overexpressed in patients with PTCa [...]."<ref name=Abdullah>{{ cite journal
|author=Mardiaty Iryani Abdullah, Ching Chin Lee, Sarni Mat Junit, Khoon Leong Ng, and Onn Haji Hashim
|title=Tissue and serum samples of patients with papillary thyroid cancer with and without benign background demonstrate different altered expression of proteins
|journal=Peer J
|date=13 September 2016
|volume=4
|issue=
|pages=e2450
|url=https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5028788/
|arxiv=
|bibcode=
|doi=10.7717/peerj.2450
|pmid=27672505
|accessdate=15 March 2020 }}</ref>

A1BG is mainly produced in the liver, and is secreted to plasma to levels of approximately 0.22 mg/mL.<ref name=Ishioka/>

===CRISPs===

The human cysteine-rich secretory protein (CRISP3) "is present in exocrine secretions and in secretory granules of neutrophilic granulocytes and is believed to play a role in innate immunity."<ref name=Udby>{{ cite journal
|author=Udby L, Sørensen OE, Pass J, Johnsen AH, Behrendt N, Borregaard N, Kjeldsen L.
|title=Cysteine-rich secretory protein 3 is a ligand of alpha1B-glycoprotein in human plasma
|journal=Biochemistry
|month=October
|year=2004
|volume=43
|issue=40
|pages=12877-86
|url=
|arxiv=
|bibcode=
|doi=10.1021/bi048823e
|pmid=15461460
|accessdate=2011-11-28 }}</ref> CRISP3 has a relatively high content in human plasma.<ref name=Udby/>

"The A1BG-CRISP-3 complex is noncovalent with a 1:1 stoichiometry and is held together by strong electrostatic forces."<ref name=Udby/> "Similar [complex formation] between toxins from snake venom and A1BG-like plasma proteins ... inhibits the toxic effect of snake venom metalloproteinases or myotoxins and protects the animal from envenomation."<ref name=Udby/>

Opossums have a remarkably robust immune system, and show partial or total immunity to the venom of rattlesnakes, ''Agkistrodon piscivorus'', cottonmouths, and other ''Crotalinae'', pit vipers.<ref>{{ cite web
|url=http://www.wildliferescueleague.org/report/opossum.html
|title=The Opossum: Our Marvelous Marsupial, The Social Loner
|publisher=Wildlife Rescue League }}</ref><ref>[http://www.scielo.br/scielo.php?pid=S0104-79301999000100005&script=sci_arttext Journal Of Venomous Animals And Toxins – Anti-Lethal Factor From Opossum Serum Is A Potent Antidote For Animal, Plant And Bacterial Toxins]. Retrieved 2009-12-29.</ref>

"Crisp3 [is] mainly [expressed] in the salivary glands, pancreas, and prostate."<ref name=Haendler>{{ cite journal
|author=B Haendler, J Krätzschmar, F Theuring and W D Schleuning
|title=Transcripts for cysteine-rich secretory protein-1 (CRISP-1; DE/AEG) and the novel related CRISP-3 are expressed under androgen control in the mouse salivary gland.
|journal=Endocrinology
|month=July
|year=1993
|volume=133
|issue=1
|pages=192-8
|url=http://endo.endojournals.org/content/133/1/192.full.pdf+html
|arxiv=
|bibcode=
|doi=10.1210/en.133.1.192
|pmid= 8319566
|accessdate=2012-02-20 }}</ref> "CRISP3 is highly expressed in the human cauda epididymidis and ampulla of vas deferens (Udby et al. 2005)."<ref name=Haendler/>

==ZNF497==
{{main|ZNF497}}
# Gene ID: 503538 is [[A1BG-AS1]] A1BG antisense RNA 1.<ref name=HGNC122019>{{ cite web
|author=HGNC2019
|title=A1BG-AS1 A1BG antisense RNA 1 [ Homo sapiens (human) ]
|publisher=National Center for Biotechnology Information
|location=U.S. National Library of Medicine, 8600 Rockville Pike, Bethesda MD, 20894 USA
|date=10 December 2019
|url=https://www.ncbi.nlm.nih.gov/gene/503538
|accessdate=2019-12-18 }}</ref> A1BG-AS1 is transcribed in the negative direction from ZSCAN22.<ref name=HGNC122019/>
# Gene ID: 162968 is [[ZNF497]] zinc finger protein 497.<ref name=HGNCDec2019>{{ cite web
|author=HGNC2019
|title=ZNF497 zinc finger protein 497 [ Homo sapiens (human) ]
|publisher=National Center for Biotechnology Information
|location=U.S. National Library of Medicine, 8600 Rockville Pike, Bethesda MD, 20894 USA
|date=10 December 2019
|url=https://www.ncbi.nlm.nih.gov/gene/162968
|accessdate=2019-12-18 }}</ref> ZNF497 is transcribed in the positive direction from RNA5SP473.<ref name=HGNCDec2019/>
# Gene ID: 100419840 is LOC100419840 zinc finger protein 446 pseudogene.<ref name=HGNC10Dec2019>{{ cite web
|author=HGNC2019
|title=LOC100419840 zinc finger protein 446 pseudogene [ Homo sapiens (human) ]
|publisher=National Center for Biotechnology Information
|location=U.S. National Library of Medicine, 8600 Rockville Pike, Bethesda MD, 20894 USA
|date=10 December 2019
|url=https://www.ncbi.nlm.nih.gov/gene/100419840
|accessdate=2019-12-18 }}</ref> LOC100419840 may be transcribed in the positive direction from LOC105372483.<ref name=HGNC10Dec2019/>
# Gene ID: 105372483 is LOC105372483 uncharacterized LOC105372483 ncRNA.<ref name=HGNC10Dece2019>{{ cite web
|author=HGNC2019
|title=LOC105372483 uncharacterized LOC105372483 [ Homo sapiens (human) ]
|publisher=National Center for Biotechnology Information
|location=U.S. National Library of Medicine, 8600 Rockville Pike, Bethesda MD, 20894 USA
|date=10 December 2019
|url=https://www.ncbi.nlm.nih.gov/gene/105372483
|accessdate=2019-12-18 }}</ref> LOC105372483 is transcribed in the negative direction from LOC100419840.<ref name=HGNC10Dece2019/>
# Gene ID: 106479017 is RNA5SP473 RNA, 5S ribosomal pseudogene 473.<ref name=RNA5SP473>{{ cite web
|author=HGNC2019
|title=RNA5SP473 RNA, 5S ribosomal pseudogene 473 [ Homo sapiens (human) ]
|publisher=National Center for Biotechnology Information
|location=U.S. National Library of Medicine, 8600 Rockville Pike, Bethesda MD, 20894 USA
|date=10 December 2019
|url=https://www.ncbi.nlm.nih.gov/gene/106479017
|accessdate=2019-12-18 }}</ref> RNA5SP473 may be transcribed in the negative direction from ZNF497.<ref name=RNA5SP473/>

==A boxes==
{{main|A box gene transcriptions}}
There is one A box on the positive strand in the negative direction (from ZSCAN22 to A1BG): 3'-TGACTCT-5' at 2788.

There is one A box complement on the negative strand in the negative direction: 3'-ACTGAGA-5' at 2788.

There is one A box inverse complement on the negative strand in the positive direction: 3'-AGAGTCA-5' at 2613.

There is one A box inverse on the positive strand in the positive direction: 3'-TCTCAGT-5' at 2613.

==ACGT-containing elements==
{{main|ACGT-containing element gene transcriptions}}
# ACGT elements, negative strand, negative direction: 24, 3'-ACGT-5' at 150, 3'-ACGT-5' at 1030, 3'-ACGT-5' at 1321, 3'-ACGT-5' at 1337, 3'-ACGT-5' at 1345, 3'-ACGT-5' at 1470, 3'-ACGT-5' at 1494, 3'-ACGT-5' at 1535, 3'-ACGT-5' at 1717, 3'-ACGT-5' at 1974, 3'-ACGT-5' at 1998, 3'-ACGT-5' at 2081, 3'-ACGT-5' at 2400, 3'-ACGT-5' at 2424, 3'-ACGT-5' at 2735, 3'-ACGT-5' at 2759, 3'-ACGT-5' at 2863, 3'-ACGT-5' at 3287, 3'-ACGT-5' at 3429, 3'-ACGT-5' at 3771, 3'-ACGT-5' at 4245, 3'-ACGT-5' at 4315, 3'-ACGT-5' at 4330, 3'-ACGT-5' at 4338.
# ACGT elements, negative strand, positive direction: 2, 3'-ACGT-5' at 569, 3'-ACGT-5' at 3254.
# ACGT elements, positive strand, negative direction: 4, 3'-ACGT-5' at 342, 3'-ACGT-5' at 531, 3'-ACGT-5' at 1772, 3'-ACGT-5' at 4236.
# ACGT elements, positive strand, positive direction: 44, 3'-ACGT-5' at 192, 3'-ACGT-5' at 224, 3'-ACGT-5' at 436, 3'-ACGT-5' at 531, 3'-ACGT-5' at 546, 3'-ACGT-5' at 656, 3'-ACGT-5' at 783, 3'-ACGT-5' at 1119, 3'-ACGT-5' at 1218, 3'-ACGT-5' at 1370, 3'-ACGT-5' at 1470, 3'-ACGT-5' at 1505, 3'-ACGT-5' at 1613, 3'-ACGT-5' at 1786, 3'-ACGT-5' at 1820, 3'-ACGT-5' at 1935, 3'-ACGT-5' at 2063, 3'-ACGT-5' at 2204, 3'-ACGT-5' at 2326, 3'-ACGT-5' at 2334, 3'-ACGT-5' at 2350, 3'-ACGT-5' at 2681, 3'-ACGT-5' at 2690, 3'-ACGT-5' at 2719, 3'-ACGT-5' at 2743, 3'-ACGT-5' at 2800, 3'-ACGT-5' at 2857, 3'-ACGT-5' at 2960, 3'-ACGT-5' at 3061, 3'-ACGT-5' at 3070, 3'-ACGT-5' at 3142, 3'-ACGT-5' at 3230, 3'-ACGT-5' at 3268, 3'-ACGT-5' at 3279, 3'-ACGT-5' at 3320, 3'-ACGT-5' at 3341, 3'-ACGT-5' at 3400, 3'-ACGT-5' at 3459, 3'-ACGT-5' at 3464, 3'-ACGT-5' at 3829, 3'-ACGT-5' at 3883, 3'-ACGT-5' at 3960, 3'-ACGT-5' at 4315, 3'-ACGT-5' at 4341.

ACGT-containing elements include these metal responsive elements:
# complement, negative strand, negative direction: 6, 3'-ACGTGAG-5' at 1348, 3'-ACGTGAG-5' at 2001, 3'-ACGTGAG-5' at 2427, 3'-ACGTGGG-5' at 2762, 3'-ACGTGAG-5' at 3290, and 3'-ACGTGAG-5' at 4341.
# complement, positive strand, negative direction: 6, 3'-ACGTGTG-5' at 549, 3'-ACGTGTG-5' at 1221, 3'-ACGTGAG-5' at 1373, 3'-ACGTGAG-5' at 1473, 3'-ACGTGTG-5' at 2963, 3'-ACGTGGG-5' at 3323.
# inverse, negative strand, negative direction: 2, 3'-CTCACGT-5' at 1470, 3'-CACACGT-5' at 2863.
# inverse, positive strand, negative direction: 2, 3'-CACACGT-5' at 531, 3'-CTCACGT-5' at 1772.
# inverse, positive strand, positive direction: 6, 3'-CGCACGT-5' at 546, 3'-CGCACGT-5' at 1218, 3'-CTCACGT-5' at 1786, 3'-CTCACGT-5' at 2326, 3'-CCCACGT-5' at 2800, 3'-CCCACGT-5' at 3883.

ACGT-containing elements include these cAMP response elements (CRE):
# negative strand in the negative direction (from ZSCAN22 to A1BG): 1, 3'-TGACGTCA-5' at 4317.

==AGC boxes==
{{Main|AGC box gene transcriptions}}
An inverse AGC box occurs negative strand, negative direction, 3'-CCGCCGA-5' at 1754 nts from ZSCAN22 toward A1BG in the distal promoter with its complement on the positive strand, negative direction.

==Angiotensinogen core promoter elements==
{{main|Angiotensinogen core promoter element gene transcriptions}}
# AGCE, negative strand, negative direction, looking for 3'-A/C-T-C/T-G-T-G-5': 4, 3'-ATTGTG-5' at 340, 3'-ATCGTG-5' at 2096, 3'-CTTGTG-5' at 3669, 3'-CTCGTG-5' at 3914.
# AGCE, negative strand, positive direction, looking for 3'-A/C-T-C/T-G-T-G-5': 2, 3'-ATTGTG-5' at 2679, 3'-CTCGTG-5' at 4376.
# AGCE, positive strand, negative direction, looking for 3'-A/C-T-C/T-G-T-G-5': 0.
# AGCE, positive strand, positive direction, looking for 3'-A/C-T-C/T-G-T-G-5': 6, 3'-CTCGTG-5' at 855, 3'-CTCGTG-5' at 955, 3'-CTCGTG-5' at 1207, 3'-CTCGTG-5' at 1627, 3'-CTTGTG-5' at 3095, 3'-CTCGTG-5' at 3739.
# AGCEc, negative strand, negative direction, looking for 3'-G/T-A-A/G-C-A-C-5': 0.
# AGCEc, negative strand, positive direction, looking for 3'-G/T-A-A/G-C-A-C-5': 6, 3'-GAGCAC-5' at 855, 3'-GAGCAC-5' at 955, 3'-GAGCAC-5' at 1207, 3'-GAGCAC-5' at 1627, 3'-GAACAC-5' at 3095, 3'-GAGCAC-5' at 3739.
# AGCEc, positive strand, negative direction, looking for 3'-G/T-A-A/G-C-A-C-5': 4, 3'-TAACAC-5' at 340, 3'-TAGCAC-5' at 2096, 3'-GAACAC-5' at 3669, 3'-GAGCAC-5' at 3914.
# AGCEc, positive strand, positive direction, looking for 3'-G/T-A-A/G-C-A-C-5': 2, 3'-TAACAC-5' at 2679, 3'-GAGCAC-5' at 4376.
# AGCEci, negative strand, negative direction, looking for 3'-C-A-C-A/G-A-G/T-5': 2, 3'-CACGAT-5' at 336, 3'-CACGAG-5' at 4403.
# AGCEci, negative strand, positive direction, looking for 3'-C-A-C-A/G-A-G/T-5': 1, 3'-CACGAG-5' at 243.
# AGCEci, positive strand, negative direction, looking for 3'-C-A-C-A/G-A-G/T-5': 10, 3'-CACGAG-5' at 435, 3'-CACGAG-5' at 572, 3'-CACGAG-5' at 708, 3'-CACGAG-5' at 1182, 3'-CACAAT-5' at 1721, 3'-CACAAG-5' at 2244, 3'-CACGAG-5' at 3232, 3'-CACAAT-5' at 3515, 3'-CACAAG-5' at 3634, 3'-CACGAG-5' at 4472.
# AGCEci, positive strand, positive direction, looking for 3'-C-A-C-A/G-A-G/T-5': 3, 3'-CACAAG-5' at 107, 3'-CACGAG-5' at 2090, 3'-CACGAG-5' at 3152.
# AGCEi, negative strand, negative direction, looking for 3'-G-T-G-C/T-T-A/C-5': 10, 3'-GTGCTC-5' at 435, 3'-GTGCTC-5' at 572, 3'-GTGCTC-5' at 708, 3'-GTGCTC-5' at 1182, 3'-GTGTTA-5' at 1721, 3'-GTGTTC-5' at 2244, 3'-GTGCTC-5' at 3232, 3'-GTGTTA-5' at 3515, 3'-GTGTTC-5' at 3634, 3'-GTGCTC-5' at 4472.
# AGCEi, negative strand, positive direction, looking for 3'-G-T-G-C/T-T-A/C-5': 3, 3'-GTGTTC-5' at 107, 3'-GTGCTC-5' at 2090, 3'-GTGCTC-5' at 3152.
# AGCEi, positive strand, negative direction, looking for 3'-G-T-G-C/T-T-A/C-5': 2, 3'-GTGCTA-5' at 336, 3'-GTGCTC-5' at 4403.
# AGCEi, positive strand, positive direction, looking for 3'-G-T-G-C/T-T-A/C-5': 0.

==ATA boxes==
{{main|ATA box gene transcriptions}}

===Core promoters===

There is the following inverse ATA box on the negative strand, negative direction: 1, 3'-AAATAA-5' at 4537 inside A1BG as the TSS is at 4460 nts from ZSCAN22.

===Proximal promoters===

There is the following inverse ATA box on the positive strand, negative direction: 3'-AAATAA-5' at 4221.

There is one inverse and inverse complement between 4050 and 4300 in the positive direction: 3'-AAATAA-5' at 4142, and 3'-TTTATT-5' at 4142.

===Distal promoters===

There is the following ATA box on the negative strand in the negative direction: 1, 3'-AATAAA-5' at 1726 nts from ZSCAN22.

There are the following ATA boxes on the positive strand in the negative direction: 3, 3'-AATAAA-5' at 3014, 3'-AATAAA-5' at 3335, and 3'-AATAAA-5' at 4072.

There are the following inverse ATA boxes on the positive strand, negative direction: 4, 3'-AAATAA-5' at 3013, 3'-AAATAA-5' at 3334, 3'-AAATAA-5' at 4071, 3'-AAATAA-5' at 4075.

There is the following ATA box on the negative strand in the positive direction: 1, 3'-AATAAA-5' at 3427. It has a complement on the positive strand in the positive direction: 1, 3'-TTATTT-5' at 3427.

There is another inverse complement ATA box on the negative strand in the positive direction in distal promoter: 3'-TTTATT-5' at 2347. It also has an inverse in the distal promoter: 3'-AAATAA-5' at 2347.

==B boxes==
{{main|B box gene transcriptions}}
While there appear to be at least two B boxes, TGGGCA is one B-box,<ref name=Johnson>{{ cite journal
|author=PA Johnson, D Bunick, NB Hecht
|title=Protein Binding Regions in the Mouse and Rat Protamine-2 Genes
|journal=Biology of Reproduction
|date=1991
|volume=44
|issue=1
|pages=127-134
|url=https://academic.oup.com/biolreprod/article-pdf/44/1/127/10536199/biolreprod0127.pdf
|arxiv=
|bibcode=
|doi=
|pmid=
|accessdate=6 April 2019 }}</ref> where the "mP2 EB fragment used for binding was the 118 nucleotide fragment extending from the ''Dde'' I site at position -140 to the ''Dde'' I site at position -23 [...]. This fragment contains the GC, E, B, CAAT, and TATA boxes."<ref name=Johnson/>

# negative strand in the negative direction, looking for 3'-TGGGCA-5', 0.
# negative strand in the positive direction, looking for 3'-TGGGCA-5', 4, 3'-TGGGCA-5' at 27, 3'-TGGGCA-5' at 1945, 3'-TGGGCA-5' at 2894, 3'-TGGGCA-5' at 4180.
# positive strand in the negative direction, looking for 3'-TGGGCA-5', 9, 3'-TGGGCA-5' at 462, 3'-TGGGCA-5' at 902, 3'-TGGGCA-5' at 1114, 3'-TGGGCA-5' at 1359, 3'-TGGGCA-5' at 2438, 3'-TGGGCA-5' at 2773, 3'-TGGGCA-5' at 3301, 3'-TGGGCA-5' at 4040, 3'-TGGGCA-5' at 4191.
# positive strand in the positive direction, looking for 3'-TGGGCA-5', 0,
# complement, negative strand, negative direction, looking for 3'-ACCCGT-5', 9, 3'-ACCCGT-5' at 462, 3'-ACCCGT-5' at 902, 3'-ACCCGT-5' at 1114, 3'-ACCCGT-5' at 1359, 3'-ACCCGT-5' at 2438, 3'-ACCCGT-5' at 2773, 3'-ACCCGT-5' at 3301, 3'-ACCCGT-5' at 4040, 3'-ACCCGT-5' at 4191.
# complement, negative strand, positive direction, looking for 3'-ACCCGT-5', 0.
# complement, positive strand, negative direction, looking for 3'-ACCCGT-5', 0.
# complement, positive strand, positive direction, looking for 3'-ACCCGT-5', 4, 3'-ACCCGT-5' at 27, 3'-ACCCGT-5' at 1945, 3'-ACCCGT-5' at 2894, 3'-ACCCGT-5' at 4180.
# inverse complement, negative strand, negative direction, looking for 3'-TGCCCA-5', 0.
# inverse complement, negative strand, positive direction, looking for 3'-TGCCCA-5', 2, 3'-TGCCCA-5' at 3237, 3'-TGCCCA-5' at 3377.
# inverse complement, positive strand, negative direction, looking for 3'-TGCCCA-5', 4, 3'-TGCCCA-5' at 1458, 3'-TGCCCA-5' at 3854, 3'-TGCCCA-5' at 3883, 3'-TGCCCA-5' at 4251.
# inverse complement, positive strand, positive direction, looking for 3'-TGCCCA-5', 1, 3'-TGCCCA-5' at 3750.
# inverse, negative strand, negative direction, looking for 3'-ACGGGT-5', 4, 3'-ACGGGT-5' at 1458, 3'-ACGGGT-5' at 3854, 3'-ACGGGT-5' at 3883, 3'-ACGGGT-5' at 4251.
# inverse, negative strand, positive direction, looking for 3'-ACGGGT-5', 1, 3'-ACGGGT-5' at 3750.
# inverse, positive strand, negative direction, looking for 3'-ACGGGT-5', 0.
# inverse, positive strand, positive direction, looking for 3'-ACGGGT-5', 2, 3'-ACGGGT-5' at 3237, 3'-ACGGGT-5' at 3377.

The other is associated with the human transforming growth factor b1 binding sequences.<ref name=Paratore>{{ cite journal
|author=Amber Paratore Sanchez and Kumar Sharma
|title=Transcription factors in the pathogenesis of diabetic nephropathy
|journal=Expert Reviews in Molecular Medicine
|date=July 2009
|volume=11
|issue=
|pages=e13
|url=https://www.cambridge.org/core/journals/expert-reviews-in-molecular-medicine/article/transcription-factors-in-the-pathogenesis-of-diabetic-nephropathy/5459130CB955272C047982BE21FEE256
|arxiv=
|bibcode=
|doi=10.1017/S1462399409001057
|pmid=
|accessdate=1 October 2018 }}</ref>

And, has the consensus sequence 3'-TGTCTCA-5'. Let it be designated B1box.

# negative strand in the negative direction, looking for 3'-TGTCTCA-5', 2, 3'-TGTCTCA-5' at 1075, 3'-TGTCTCA-5' at 2445.
# negative strand in the positive direction, looking for 3'-TGTCTCA-5', 2, 3'-TGTCTCA-5'at 2174, 3'-TGTCTCA-5' at 2468.
# positive strand in the negative direction, looking for 3'-TGTCTCA-5', 5, 3'-TGTCTCA-5' at 923, 3'-TGTCTCA-5' at 1089, 3'-TGTCTCA-5' at 2033, 3'-TGTCTCA-5' at 3323, 3'-TGTCTCA-5' at 4373.
# positive strand in the positive direction, looking for 3'-TGTCTCA-5', 0.
# complement, negative strand, negative direction, looking for 3'-ACAGAGT-5', 5, 3'-ACAGAGT-5' at 923, 3'-ACAGAGT-5' at 1089, 3'-ACAGAGT-5' at 2033, 3'-ACAGAGT-5' at 3323, 3'-ACAGAGT-5' at 4373.
# complement, negative strand, positive direction, looking for 3'-ACAGAGT-5', 0.
# complement, positive strand, negative direction, looking for 3'-ACAGAGT-5', 2, 3'-ACAGAGT-5' at 1075, 3'-ACAGAGT-5' at 2445.
# complement, positive strand, positive direction, looking for 3'-ACAGAGT-5', 2, 3'-ACAGAGT-5' at 2174, 3'-ACAGAGT-5' at 2468.
# inverse complement, negative strand, negative direction, looking for 3'-TGAGACA-5', 3, 3'-TGAGACA-5' at 919, 3'-TGAGACA-5' at 1085, 3'-TGAGACA-5' at 2029.
# inverse complement, negative strand, positive direction, looking for 3'-TGAGACA-5', 0.
# inverse complement, positive strand, negative direction, looking for 3'-TGAGACA-5', 0.
# inverse complement, positive strand, positive direction, looking for 3'-TGAGACA-5', 1, 3'-TGAGACA-5' at 2308.
# inverse, negative strand, negative direction, looking for 3'-ACTCTGT-5', 0.
# inverse, negative strand, positive direction, looking for 3'-ACTCTGT-5', 1, 3'-ACTCTGT-5' at 2308.
# inverse, positive strand, negative direction, looking for 3'-ACTCTGT-5', 3, 3'-ACTCTGT-5' at 919, 3'-ACTCTGT-5' at 1085, 3'-ACTCTGT-5' at 2029.
# inverse, positive strand, positive direction, looking for 3'-ACTCTGT-5', 0.

==B recognition elements==
{{main|Factor II B recognition element gene transcriptions}}
The factor II B recognition element is BRE<sup>u</sup>.

Negative strand in the negative direction there are 3: 3'-CCACGCC-5' at 380, 3'-CCGCGCC-5' at 1762, and 3'-CCACGCC-5' at 2197 the distal promoter.

Complement, negative strand, negative direction there us 1: 3'-CCTGCGG-5' at 1153.

Inverse complement, positive strand, negative direction there are 4: 3'-GGCGTGG-5' at 1244, 3'-GGCGCGG-5' at 1762, 3'-GGCGTGG-5' at 1897, and 3'-GGCGTGG-5' at 3047.

Negative strand in the positive direction there are 3: 3'-GCACGCC-5', 1302, 3'-GGACGCC-5', 1672, 3'-GGGCGCC-5', 1769.

Positive strand in the positive direction there are 3: 3'-CCACGCC-5', 489, 3'-CGACGCC-5', 1033, 3'-CCACGCC-5', 1764.

Inverse complement, negative strand, positive direction there is 1: 3'-GGCGCCC-5', 1770.

Inverse complement, positive strand, positive direction there is 4: 3'-GGCGCGC-5', 682, 3'-GGCGCCG-5', 1338, 3'-GGCGCCG-5', 1438, 3'-GGCGTGG-5', 2566.

==CAAT boxes==
{{Main|CAAT box gene transcriptions}}
There are no CAAT boxes in either promoter.

==CAREs==
{{main|CARE gene transcriptions}}
A CARE occurs in the negative direction: 3'-CAACTC-5' at 86 possibly associated with ZSCAN22. But inverse CAREs occur 3'-CTCAAC-5' at 1406, 3'-CTCAAC-5' at 2592, 3'-CTCAAC-5' at 2704, 3'-CTCAAC-5' at 3115, and 3'-CTCAAC-5' at 4096.

A CARE occurs in the positive direction: 3'-CAACTC-5' at 3292 in the positive direction. But inverse CARE occur 3'-CTCAAC-5' at 1406 and 3'-CTCAAC-5' at 1621 and 3'-CTCAAC-5' at 3290.

==CArG boxes==
{{main|CArG box gene transcriptions}}

There is a more general CArG box, 3'-CATTAAAAGG-5', at 3441 from ZSCAN22, or -1019 nts from the TSS of A1BG in the negative direction on the positive strand in the distal promoter.

A second more general CArG box, 3'-CAAAAAAAAG-5', at 1399 from ZSCAN22, or -3061 nts from the A1BG TSS may be a CArG box for ZSCAN22 in the negative direction on the positive strand in the distal promoter.

==C boxes==
{{main|C box gene transcriptions}}

===Proximal promoters===

Inverse complement, negative strand, negative direction there is 1: 3'-ACATCA-5', 4124.

There is one C box 3'-ACATCA-5' at 4116 nts in the positive direction.

===Distal promoters===

There are four C boxes: 3'-AGTAGT-5' at 2888, 3'-AGTAGT-5' at 2944, 3'-AGTAGT-5' at 3418, and 3'-AGTAGT-5' at 3521 on the negative strand in the negative direction and its complement on the positive strand.

Inverse complement, negative strand, negative direction there are 2: 3'-ACATCA-5', 2340, 3'-ACATCA-5', 2541.

There is one complement C box: 3'-TCATCA-5' at 3251 on the negative strand in the positive direction and its complement on the positive strand.

Inverse, negative strand, positive direction, there is 1: 3'-TGATGA-5', 2144.

Positive strand in the positive direction there is 1: 3'-AGTAGT-5', 3251.

==CENP-B boxes==
{{main|CENP-B box gene transcriptions}}
There are no CENP-B boxes in either promoter.

==CGCG boxes==
{{main|CGCG box gene transcriptions}}
Negative strand in the negative direction there are 2: 3'-GCGCGT-5', 161, 3'-CCGCGC-5', 1761, in the distal promoter.

Positive strand in the negative direction there is 1: 3'-GCGCGG-5', 1762, in the distal promoter.

Negative strand in the positive direction there are 8: 3'-GCGCGT-5', 543, 3'-CCGCGC-5', 681, 3'-GCGCGC-5', 683, 3'-ACGCGG-5', 871, 3'-ACGCGG-5', 971, 3'-CCGCGG-5', 1337, 3'-CCGCGG-5', 1437, 3'-CCGCGC-5', 1650, in the distal promoter.

Positive strand in the positive direction there are 22: 3'-CCGCGC-5', 161, 3'-ACGCGG-5', 452, 3'-CCGCGC-5', 542, 3'-GCGCGC-5', 682, 3'-GCGCGT-5', 684, 3'-CCGCGT-5', 876, 3'-CCGCGT-5', 976, 3'-CCGCGT-5', 1046, 3'-ACGCGG-5', 1078, 3'-ACGCGG-5', 1162, 3'-CCGCGC-5', 1214, 3'-ACGCGG-5', 1246, 3'-CCGCGT-5', 1298, 3'-ACGCGT-5', 1314, 3'-ACGCGG-5', 1354, 3'-ACGCGG-5', 1398, 3'-ACGCGT-5', 1414, 3'-ACGCGG-5', 1454, 3'-ACGCGG-5', 1498, 3'-ACGCGT-5', 1523, 3'-CCGCGT-5', 1550, 3'-CCGCGG-5', 1769, in the distal promoter.

==CRE boxes==
{{main|CRE box gene transcriptions}}
Negative strand in the negative direction there is 1: 3'-TGACGTCA-5', 4317, and its complement in the proximal promoter.

==D boxes==
{{main|C and D box gene transcriptions}}
There is one D box in the distal promoter: 3'-AGTCTG-5' at 2947 on the negative strand in the negative direction and its complement on the positive strand.

Positive strand in the negative direction there is 1: 3'-AGTCTG-5', 1355.

Inverse complement, positive strand, negative direction there are 2: 3'-CAGACT-5', 15, 3'-CAGACT-5', 1616.

There is one D box in the distal promoter: 3'-AGTCTG-5' at 3923 on the negative strand in the positive direction and its complement on the positive strand.

Inverse complement, negative strand, positive direction there are 2: 3'-CAGACT-5', 1744, 3'-CAGACT-5', 2416.

Inverse complement, positive strand, positive direction there are 3: 3'-CAGACT-5', 2943, 3'-CAGACT-5', 3006, 3'-CAGACT-5', 3924.

==Downstream B recognition elements==
{{main|Downstream TFIIB recognition element gene transcriptions}}
# negative strand in the negative direction, looking for 3'-A/G-T-A/G/T-G/T-G/T-G/T-G/T-5', 59, 3'-ATTTTGT-5' at 68, 3'-ATATGTT-5' at 113, 3'-GTTTTGT-5' at 166, 3'-ATATTTT-5' at 183, 3'-ATATTTT-5' at 222, 3'-GTTTTGG-5' at 259, 3'-ATGTTTT-5' at 485, 3'-GTTTTTT-5' at 487, 3'-ATTGGGG-5' at 616, 3'-ATGTTTT-5' at 637, 3'-GTTTTTT-5' at 639, 3'-ATGTTTT-5' at 771, 3'-GTTTTTT-5' at 773, 3'-GTGTGGT-5' at 883, 3'-GTTTTTT-5' at 928, 3'-GTTTTTT-5' at 1094, 3'-ATGTTTT-5' at 1228, 3'-GTTTTTT-5' at 1230, 3'-GTTTTTG-5' at 1386, 3'-GTTTGTT-5' at 1392, 3'-GTTTTTT-5' at 1396, 3'-GTTGGGT-5' at 1409, 3'-GTTGGGT-5' at 1516, 3'-GTTTGTG-5' at 1540, 3'-ATGTTTT-5' at 1880, 3'-GTTTTTT-5' at 1882, 3'-GTTTTTT-5' at 2038, 3'-ATGTTTT-5' at 2182, 3'-GTTTTTT-5' at 2184, 3'-ATGTTTT-5' at 2307, 3'-GTTTTTT-5' at 2309, 3'-GTGTGGT-5' at 2419, 3'-GTTTGTT-5' at 2484, 3'-GTTTGTT-5' at 2488, 3'-ATATGTT-5' at 2642, 3'-ATGTTTT-5' at 2644, 3'-GTGGGGT-5' at 2764, 3'-GTTGGGT-5' at 2846, 3'-ATATTTG-5' at 2875, 3'-GTAGTTT-5' at 2890, 3'-ATTTTTT-5' at 3026, 3'-GTGGGTT-5' at 3136, 3'-ATTTTTG-5' at 3165, 3'-GTATTTT-5' at 3171, 3'-GTTTTTG-5' at 3328, 3'-ATTTGTT-5' at 3338, 3'-ATTTGGT-5' at 3365, 3'-ATTTGGT-5' at 3484, 3'-GTAGTTG-5' at 3523, 3'-ATGGTGG-5' at 3740, 3'-GTGTTTT-5' at 3767, 3'-ATGTTTT-5' at 4066, 3'-GTTTTTT-5' at 4068, 3'-GTTGTGT-5' at 4196, 3'-ATGTTTT-5' at 4216, 3'-GTTTTTT-5' at 4218, 3'-GTTTTTT-5' at 4378, 3'-GTGGGGT-5' at 4446, 3'-GTAGGTG-5' at 4458 and their complements.
# negative strand in the positive direction, looking for 3'-A/G-T-A/G/T-G/T-G/T-G/T-G/T-5', 11, 3'-GTGGGGG-5' at 56, 3'-ATTTTTT-5' at 2451, 3'-GTGTTGG-5' at 2816, 3'-ATGTTTG-5' at 3339, 3'-GTGGTGG-5' at 3816, 3'-GTGTGGT-5' at 3967, 3'-GTGGTGT-5' at 3969, 3'-GTGGTTT-5' at 4108, 3'-ATTGTTG-5' at 4173, 3'-ATGGGGG-5' at 4225, 3'-GTGGGGT-5' at 4397 and their complements.
# positive strand in the negative direction, looking for 3'-A/G-T-A/G/T-G/T-G/T-G/T-G/T-5', 31, 3'-ATATGTT-5' at 43, 3'-ATATGGG-5' at 78, 3'-ATGGGGT-5' at 204, 3'-ATGTTTT-5' at 215, 3'-ATATGGT-5' at 606, 3'-ATGGTGT-5' at 608, 3'-ATGTGGT-5' at 788, 3'-GTGGTGG-5' at 790, 3'-GTGGTGT-5' at 793, 3'-ATTGGGT-5' at 1047, 3'-GTGGGTG-5' at 1163, 3'-GTGGTGG-5' at 1247, 3'-GTGGTGT-5' at 1477, 3'-GTGGTGG-5' at 1900, 3'-GTGGTGG-5' at 1903, 3'-GTGGGTG-5' at 2332, 3'-GTGTGGT-5' at 2659, 3'-GTGGTGG-5' at 2661, 3'-ATATTTT-5' at 2853, 3'-GTGGTGG-5' at 3050, 3'-GTGTGGT-5' at 3187, 3'-GTGGTGG-5' at 3189, 3'-GTGGTGG-5' at 3192, 3'-GTGGGTG-5' at 3195, 3'-ATTGGTT-5' at 3531, 3'-GTGGTTG-5' at 3605, 3'-ATGGGGT-5' at 3802, 3'-ATGTGGT-5' at 3811, 3'-GTGTTGG-5' at 3942, 3'-GTTGGTT-5' at 3944, 3'-ATGGTGG-5' at 4110 and their complements.
# positive strand in the positive direction, looking for 3'-A/G-T-A/G/T-G/T-G/T-G/T-G/T-5', 19, 3'-GTGGGTG-5' at 72, 3'-GTAGGTG-5' at 631, 3'-GTAGGTG-5' at 700, 3'-GTGGTGG-5' at 704, 3'-ATGGGGT-5' at 1891, 3'-GTTGGGT-5' at 2015, 3'-GTGGGGG-5' at 2020, 3'-GTTGGTG-5' at 2122, 3'-ATATGGT-5' at 2591, 3'-ATGGTGT-5' at 2600, 3'-GTGTGGT-5' at 2603, 3'-ATGGTGG-5' at 2759, 3'-GTGTGGG-5' at 2965, 3'-ATAGGGT-5' at 3386, 3'-GTAGGGT-5' at 3631, 3'-GTGTGGT-5' at 3825, 3'-GTTTGTG-5' at 4257, 3'-GTGGGGT-5' at 4286, 3'-GTGGGGT-5' at 4328 and their complements.
# inverse, negative strand, negative direction, is SuccessablesdBREi--.bas, looking for 3'-G/T-G/T-G/T-G/T-A/G/T-T-A/G-5', 44, 3'-TTTGTTA-5' at 230, 3'-TTTTGTA-5' at 361, 3'-TTTTTTA-5' at 488, 3'-TTTTATG-5' at 633, 3'-TTTTATG-5' at 767, 3'-TGTGGTA-5' at 884, 3'-GGTTGTA-5' at 1205, 3'-TTTTTTA-5' at 1231, 3'-GTTTTTG-5' at 1386, 3'-GTTTGTG-5' at 1540, 3'-TTTTATG-5' at 1564, 3'-TTGTTTG-5' at 1587, 3'-TTTTATA-5' at 1740, 3'-TGGGGTA-5' at 1861, 3'-TTTTATG-5' at 1876, 3'-TTTTTTA-5' at 2061, 3'-GGTTGTA-5' at 2150, 3'-TTTTTTA-5' at 2185, 3'-TGGGGTA-5' at 2288, 3'-TTTTATG-5' at 2303, 3'-TGTGGTG-5' at 2420, 3'-TTGTTTG-5' at 2486, 3'-TTGTTTG-5' at 2511, 3'-GGTTGTG-5' at 2549, 3'-GGTTGTA-5' at 2612, 3'-GTTTTTA-5' at 2646, 3'-TTTGTTG-5' at 2843, 3'-TTTTATA-5' at 2869, 3'-TTTTTTA-5' at 2930, 3'-TTTGGTG-5' at 2972, 3'-TTTTTTG-5' at 3027, 3'-TGGGTTG-5' at 3137, 3'-TGGGGTA-5' at 3152, 3'-TTTTGTA-5' at 3167, 3'-GTTTTTG-5' at 3328, 3'-TTTGGTG-5' at 3366, 3'-TTTTGTG-5' at 3512, 3'-GTTGATA-5' at 3526, 3'-TGTTTTA-5' at 3768, 3'-GGGTATG-5' at 3857, 3'-GGTTGTG-5' at 3981, 3'-TTTTTTA-5' at 4069, 3'-TTTTTTA-5' at 4219, 3'-TTGGGTA-5' at 4454 and their complements.
# inverse, negative strand, positive direction, is SuccessablesdBREi-+.bas, looking for 3'-G/T-G/T-G/T-G/T-A/G/T-T-A/G-5', 16, 3'-GGGGATG-5' at 59, 3'-TGTTTTA-5' at 148, 3'-TTGGGTG-5' at 1802, 3'-TTTTTTG-5' at 2282, 3'-TGGGATG-5' at 2409, 3'-TTTTTTG-5' at 2452, 3'-GGGGATA-5' at 2659, 3'-GGTTTTG-5' at 2688, 3'-GTGGATG-5' at 2714, 3'-GGTGTTG-5' at 2815, 3'-GGTTATG-5' at 3026, 3'-TGTGGTG-5' at 3644, 3'-TTTGGTG-5' at 3949, 3'-TGTGGTG-5' at 3968, 3'-GGTTTTA-5' at 4110, 3'-TGGGGTG-5' at 4398 and their complements.
# inverse, positive strand, negative direction, is SuccessablesdBREi+-.bas, looking for 3'-G/T-G/T-G/T-G/T-A/G/T-T-A/G-5', 16, 3'-GTTTTTA-5' at 217, 3'-TGGTGTG-5' at 609, 3'-TGTGGTG-5' at 789, 3'-TTGGGTG-5' at 1048, 3'-GTGGGTG-5' at 1163, 3'-TTTTTTG-5' at 1433, 3'-TGGTGTG-5' at 1478, 3'-GGTGGTG-5' at 1902, 3'-GTGGGTG-5' at 2332, 3'-TGTGGTG-5' at 2660, 3'-GGGTGTG-5' at 3185, 3'-GGTTTTA-5' at 3350, 3'-TTGGTTG-5' at 3532, 3'-GTGGTTG-5' at 3605, 3'-GGTGATG-5' at 3798, 3'-TTGGTTG-5' at 3945 and their complements.
# inverse, positive strand, positive direction, is SuccessablesdBREi++.bas, looking for 3'-G/T-G/T-G/T-G/T-A/G/T-T-A/G-5', 14, 3'-GTGGGTG-5' at 72, 3'-GGTGGTG-5' at 703, 3'-TTGGATG-5' at 1283, 3'-TTGGGTG-5' at 2016, 3'-GTTGGTG-5' at 2122, 3'-TGGTGTG-5' at 2601, 3'-TTTGGTG-5' at 2633, 3'-TTGTGTG-5' at 3097, 3'-TGGTTTG-5' at 3176, 3'-TGTGGTA-5' at 3826, 3'-TGGGGTG-5' at 3941, 3'-TGGGGTA-5' at 4220, 3'-GTTTGTG-5' at 4257, 3'-TGGGGTG-5' at 4287 and their complements.

==Downstream core elements==
{{main|Downstream core element gene transcriptions}}

In the negative direction on the negative strand, the A1BG transcription start site is at 4460 nucleotides from the last nucleotide of the gene ZSCAN22. In the positive direction on the negative strand, the A1BG transcription start site is at 4300 from well within the gene ZNF497. Downstream core elements are expected downstream of these TSSs. Occurrences before the TSSs can be found on [[Downstream core element gene transcriptions]].

# negative strand, negative direction, looking for DCE SI: 3'-CTTC-5', 0.
# negative strand, positive direction, looking for DCE SI: 3'-CTTC-5', 0.
# positive strand, negative direction, looking for DCE SI: 3'-CTTC-5' at 4528.
# positive strand, positive direction, looking for DCE SI: 3'-CTTC-5', 0.

# negative strand, negative direction, looking for DCE SII: 3'-CTGT-5', 2, 3'-CTGT-5' at 4468 , 3'-CTGT-5' at 4507.
# negative strand, positive direction, looking for DCE SII: 3'-CTGT-5', 1, 3'-CTGT-5' at 4392.
# positive strand, negative direction, looking for DCE SII: 3'-CTGT-5', 0.
# positive strand, positive direction, looking for DCE SII: 3'-CTGT-5', 1, 3'-CTGT-5' at 4332.

# negative strand, negative direction, looking for DCE SIII: 3'-AGC-5', 0.
# negative strand, positive direction, looking for DCE SIII: 3'-AGC-5', 1, 3'-AGC-5' at 4352.
# positive strand, negative direction, looking for DCE SIII: 3'-AGC-5', 3, 3'-AGC-5' at 4480, 3'-AGC-5' at 4489, 3'-AGC-5' at 4520.
# positive strand, positive direction, looking for DCE SIII: 3'-AGC-5', 1, 3'-AGC-5' at 4374.

===Complements===
# negative strand, negative direction, looking for DCE SIc: 3'-GAAG-5', 1, 3'-GAAG-5' at 4528.
# negative strand, positive direction, looking for DCE SIc: 3'-GAAG-5', 0.
# positive strand, negative direction, looking for DCE SIc: 3'-GAAG-5', 0.
# positive strand, positive direction, looking for DCE SIc: 3'-GAAG-5', 0.

# negative strand, negative direction, looking for DCE SIIc: 3'-GACA-5', 0.
# negative strand, positive direction, looking for DCE SIIc: 3'-GACA-5', 1, 3'-GACA-5' at 4332.
# positive strand, negative direction, looking for DCE SIIc: 3'-GACA-5', 2, 3'-GACA-5' at 4468, 3'-GACA-5' at 4507.
# positive strand, positive direction, looking for DCE SIIc: 3'-GAAG-5', 1, 3'-GACA-5' at 4392.

# negative strand, negative direction, looking for DCE SIIIc: 3'-TCG-5', 3, 3'-TCG-5' at 4480, 3'-TCG-5' at 4489, 3'-TCG-5' at 4520.
# negative strand, positive direction, looking for DCE SIIIc: 3'-TCG-5', 1, 3'-TCG-5' at 4374.
# positive strand, negative direction, looking for DCE SIIIc: 3'-TCG-5', 0.
# positive strand, positive direction, looking for DCE SIIIc: 3'-TCG-5', 1, 3'-TCG-5' at 4352.

===Inverse complements===

# looking for DCE SIci: 3'-GAAG-5', same as the complements.

# negative strand, negative direction, looking for DCE SIIci: 3'-ACAG-5', 0.
# negative strand, positive direction, looking for DCE SIIci: 3'-ACAG-5', 0.
# positive strand, negative direction, looking for DCE SIIci: 3'-ACAG-5', 1, 3'-ACAG-5' at 4517.
# positive strand, positive direction, looking for DCE SIIci: 3'-ACAG-5', 1, 3'-ACAG-5' at 4366.

# negative strand, negative direction, looking for DCE SIIIci: 3'-GCT-5', 1, 3'-GCT-5' at 4471.
# negative strand, positive direction, looking for DCE SIIIci: 3'-GCT-5', 4, 3'-GCT-5' at 4312, 3'-GCT-5' at 4321, 3'-GCT-5' at 4372, 3'-GCT-5' at 4390.
# positive strand, negative direction, looking for DCE SIIIci: 3'-GCT-5', 0.
# positive strand, positive direction, looking for DCE SIIIci: 3'-GCT-5', 1, 3'-GCT-5' at 4356.

===Inverses===

# looking for DCE SIi: 3'-CTTC-5', same as the direct transcript.

# negative strand, negative direction, looking for DCE SIIi: 3'-TGTC-5', 1, 3'-TGTC-5' at 4517.
# negative strand, positive direction, looking for DCE SIIi: 3'-TGTC-5', 1, 3'-TGTC-5' at 4366.
# positive strand, negative direction, looking for DCE SIIi: 3'-TGTC-5', 0.
# positive strand, positive direction, looking for DCE SIIi: 3'-TGTC-5', 0.

# negative strand, negative direction, looking for DCE SIIIi: 3'-CGA-5', 0.
# negative strand, positive direction, looking for DCE SIIIi: 3'-CGA-5', 1, 3'-CGA-5' at 4356.
# positive strand, negative direction, looking for DCE SIIIi: 3'-CGA-5', 1, 3'-CGA-5' at 4471.
# positive strand, positive direction, looking for DCE SIIIi: 3'-CGA-5', 4, 3'-CGA-5' at 4312, 3'-CGA-5' at 4321, 3'-CGA-5' at 4372, 3'-CGA-5' at 4390.

==Downstream promoter elements==
{{main|Downstream promoter element gene transcriptions}}
# negative strand in the negative direction (from ZSCAN22 to A1BG) is SuccessablesDPE--.bas, looking for 3'-A/G-G-A/T-C/T-A/C/G-5', 163, 3'-GGTCG-5', 35, 3'-AGATA-5', 234, 3'-GGTCC-5', 262, 3'-GGACA-5', 394, 3'-GGTCG-5', 403, 3'-GGTTC-5', 419, 3'-AGTCC-5', 441, 3'-GGACC-5', 459, 3'-AGATG-5', 481, 3'-GGTCG-5', 504, 3'-GGACC-5', 508, 3'-GGTCG-5', 540, 3'-GGTTC-5', 556, 3'-AGTCC-5', 578, 3'-GGACC-5', 596, 3'-AGATG-5', 624, 3'-GGTCC-5', 648, 3'-GGACA-5', 667, 3'-GGTCG-5', 676, 3'-GGTTC-5', 692, 3'-AGTCC-5', 714, 3'-GGTCG-5', 728, 3'-GGTCG-5', 737, 3'-AGATG-5', 758, 3'-GGACA-5', 801, 3'-GGTCG-5', 810, 3'-GGTCC-5', 850, 3'-GGTTC-5', 874, 3'-GGTCG-5', 895, 3'-GGACC-5', 899, 3'-AGACA-5', 919, 3'-GGTCC-5', 948, 3'-GGACA-5', 967, 3'-GGTCG-5', 976, 3'-AGTCC-5', 984, 3'-GGACC-5', 1015, 3'-GGTCG-5', 1061, 3'-AGACA-5', 1085, 3'-GGACA-5', 1131, 3'-GGTCG-5', 1140, 3'-GGTCG-5', 1194, 3'-GGACC-5', 1198, 3'-GGTTG-5', 1203, 3'-AGATG-5', 1224, 3'-GGACA-5', 1258, 3'-GGTCG-5', 1267, 3'-AGTCC-5', 1275, 3'-GGATC-5', 1306, 3'-GGTCA-5', 1352, 3'-AGACC-5', 1356, 3'-AGTTG-5', 1406, 3'-AGACA-5', 1452, 3'-GGTCC-5', 1460, 3'-AGTCG-5', 1486, 3'-AGTTG-5', 1513, 3'-AGATA-5', 1525, 3'-GGTCA-5', 1532, 3'-GGTCG-5', 1611, 3'-AGACA-5', 1776, 3'-GGTCG-5', 1785, 3'-GGTTC-5', 1817, 3'-GGACC-5', 1841, 3'-AGATG-5', 1867, 3'-GGACA-5', 1911, 3'-GGTCG-5', 1920, 3'-GGACC-5', 1959, 3'-GGTCG-5', 2005, 3'-GGACC-5', 2009, 3'-AGACA-5', 2029, 3'-GGTCC-5', 2077, 3'-GGATC-5', 2093, 3'-AGTCC-5', 2134, 3'-GGTTG-5', 2148, 3'-AGATG-5', 2169, 3'-GGTCA-5', 2211, 3'-AGTCC-5', 2250, 3'-GGTCG-5', 2264, 3'-GGACC-5', 2268, 3'-AGATG-5', 2294, 3'-GGACA-5', 2337, 3'-GGTCG-5', 2346, 3'-GGACC-5', 2385, 3'-GGTCG-5', 2431, 3'-GGACC-5', 2435, 3'-AGTTA-5', 2496, 3'-GGTCC-5', 2519, 3'-GGACA-5', 2538, 3'-GGTTG-5', 2547, 3'-AGTCC-5', 2587, 3'-GGTCA-5', 2601, 3'-GGTTG-5', 2610, 3'-AGTCG-5', 2650, 3'-GGTCA-5', 2654, 3'-GGACA-5', 2672, 3'-GGTCG-5', 2681, 3'-GGACC-5', 2720, 3'-GGTCG-5', 2766, 3'-GGACC-5', 2770, 3'-GGTTA-5', 2848, 3'-AGATG-5', 2988, 3'-GGATA-5', 2996, 3'-GGACA-5', 3061, 3'-GGTCG-5', 3070, 3'-AGTCC-5', 3110, 3'-GGTCG-5', 3124, 3'-GGACC-5', 3128, 3'-GGTTG-5', 3137, 3'-AGATG-5', 3158, 3'-GGACA-5', 3200, 3'-AGTCG-5', 3204, 3'-GGTCG-5', 3209, 3'-AGTCC-5', 3217, 3'-GGTCC-5', 3249, 3'-GGTTC-5', 3273, 3'-GGTCG-5', 3294, 3'-GGACC-5', 3298, 3'-AGACA-5', 3319, 3'-AGTCC-5', 3396, 3'-AGTTG-5', 3523, 3'-AGACA-5', 3556, 3'-GGTCC-5', 3564, 3'-GGACG-5', 3579, 3'-GGTCC-5', 3585, 3'-GGTCG-5', 3682, 3'-GGTCG-5', 3701, 3'-AGACG-5', 3706, 3'-GGTCG-5', 3731, 3'-GGACC-5', 3744, 3'-AGACC-5', 3835, 3'-AGTTC-5', 3844, 3'-GGACG-5', 3861, 3'-GGTCC-5', 3871, 3'-GGTCC-5', 3885, 3'-GGACC-5', 3906, 3'-GGTCC-5', 3951, 3'-GGACA-5', 3970, 3'-GGTTG-5', 3979, 3'-GGTTC-5', 4019, 3'-AGTTC-5', 4027, 3'-GGTCG-5', 4033, 3'-GGACC-5', 4037, 3'-AGATG-5', 4062, 3'-GGTCC-5', 4102, 3'-GGACA-5', 4121, 3'-GGTCG-5', 4130, 3'-AGTCC-5', 4138, 3'-GGTCC-5', 4170, 3'-AGTTC-5', 4178, 3'-GGACA-5', 4208, 3'-AGATG-5', 4212, 3'-GGTCC-5', 4253, 3'-GGTCG-5', 4261, 3'-GGACC-5', 4300, 3'-GGTCG-5', 4345, 3'-GGACC-5', 4349, 3'-GGACA-5', 4369, 3'-GGTCA-5', 4415, 3'-AGATG-5', 4430, 3'-AGTCC-5', 4436, 3'-GGTCG-5', 4480, 3'-AGTCG-5', 4489, 3'-GGACC-5', 4494, 3'-GGACC-5', 4546, and their complements.
# negative strand in the positive direction (from ZNF497 to A1BG) is SuccessablesDPE-+.bas, looking for 3'-A/G-G-A/T-C/T-A/C/G-5', 73, 3'-GGACC-5' at 37, 3'-GGATG-5' at 59, 3'-GGTCA-5' at 153, 3'-AGATG-5' at 166, 3'-AGTCC-5' at 172, 3'-GGACC-5' at 187, 3'-GGTCC-5' at 218, 3'-GGTTC-5' at 305, 3'-GGACG-5' at 323, 3'-GGACG-5' at 359, 3'-AGACG-5' at 398, 3'-GGACG-5' at 410, 3'-AGACC-5' at 440, 3'-AGACA-5' at 712, 3'-AGTCC-5' at 757, 3'-AGATC-5' at 864, 3'-AGATC-5' at 964, 3'-AGTCG-5' at 1528, 3'-GGACG-5' at 1670, 3'-GGTCG-5' at 1687, 3'-GGACA-5' at 1693, 3'-AGTCC-5' at 1826, 3'-AGTCC-5' at 1841, 3'-GGACA-5' at 1869, 3'-GGATG-5' at 1878, 3'-GGTTC-5' at 1926, 3'-AGTTC-5' at 1987, 3'-AGTCC-5' at 2026, 3'-GGTCA-5' at 2035, 3'-AGTCA-5' at 2100, 3'-AGTTA-5' at 2134, 3'-GGTCA-5' at 2220, 3'-AGATC-5' at 2230, 3'-GGATG-5' at 2409, 3'-GGACA-5' at 2460, 3'-AGTCA-5' at 2607, 3'-AGTCA-5' at 2613, 3'-AGTCA-5' at 2618, 3'-GGATA-5' at 2659, 3'-AGTTA-5' at 2666, 3'-GGATG-5' at 2714, 3'-GGATA-5' at 2737, 3'-AGACC-5' at 2861, 3'-GGTTC-5' at 2922, 3'-AGTTC-5' at 2954, 3'-AGTCC-5' at 2998, 3'-GGTTA-5' at 3024, 3'-GGTTG-5' at 3050, 3'-AGTCC-5' at 3084, 3'-GGACA-5' at 3131, 3'-GGACC-5' at 3172, 3'-AGTCG-5' at 3283, 3'-AGTTA-5' at 3381, 3'-AGATG-5' at 3418, 3'-GGATG-5' at 3457, 3'-AGATG-5' at 3475, 3'-GGTTG-5' at 3490, 3'-GGACA-5' at 3530, 3'-GGACC-5' at 3545, 3'-AGACC-5' at 3550, 3'-GGATG-5' at 3574, 3'-GGTCA-5' at 3820, 3'-AGTCC-5' at 3863, 3'-AGACA-5' at 3893, 3'-GGTTC-5' at 4073, 3'-GGATC-5' at 4080, 3'-GGATG-5' at 4099, 3'-AGTTC-5' at 4200, 3'-GGACA-5' at 4252, 3'-GGTCA-5' at 4269, 3'-AGACG-5' at 4319, 3'-AGACA-5' at 4332, 3'-GGTCC-5' at 4420, and their complements.
# positive strand in the negative direction is SuccessablesDPE+-.bas, looking for 3'-A/G-G-A/T-C/T-A/C/G-5', 101, 3'-GGACC-5', 32, 3'-AGATA-5', 57, 3'-GGATA-5', 74, 3'-AGTTG-5', 84, 3'-GGATA-5', 98, 3'-GGATA-5', 108, 3'-AGTCG-5', 157, 3'-AGACA-5', 170, 3'-GGTCA-5', 206, 3'-AGATG-5', 244, 3'-AGTTC-5', 253, 3'-AGACA-5', 422, 3'-GGATC-5', 430, 3'-GGTCA-5', 439, 3'-GGATC-5', 525, 3'-AGACA-5', 559, 3'-GGTCA-5', 568, 3'-GGTCA-5', 576, 3'-AGATC-5', 589, 3'-GGATC-5', 703, 3'-GGTCA-5', 712, 3'-AGTTC-5', 719, 3'-AGACC-5', 725, 3'-GGATG-5', 784, 3'-GGTTG-5', 862, 3'-AGATC-5', 877, 3'-AGATC-5', 972, 3'-GGTTG-5', 1028, 3'-GGACG-5', 1151, 3'-GGATC-5', 1167, 3'-AGTTC-5', 1177, 3'-GGTTG-5', 1319, 3'-AGATG-5', 1438, 3'-AGACA-5', 1569, 3'-AGATA-5', 1595, 3'-GGATC-5', 1812, 3'-AGATG-5', 1828, 3'-AGACC-5', 1834, 3'-AGATC-5', 1987, 3'-GGACA-5', 2117, 3'-AGACC-5', 2121, 3'-AGACC-5', 2145, 3'-AGATA-5', 2177, 3'-GGTTG-5', 2234, 3'-GGATC-5', 2239, 3'-GGTCA-5', 2248, 3'-AGACC-5', 2261, 3'-GGACA-5', 2271, 3'-GGTTG-5', 2398, 3'-AGATC-5', 2413, 3'-AGTCC-5', 2543, 3'-GGATC-5', 2574, 3'-GGTCA-5', 2585, 3'-AGTTG-5', 2592, 3'-AGACC-5', 2598, 3'-AGTTG-5', 2704, 3'-AGTTG-5', 2733, 3'-AGACA-5', 2880, 3'-AGATG-5', 2894, 3'-AGATG-5', 2905, 3'-AGACA-5', 2948, 3'-AGATA-5', 2981, 3'-GGATC-5', 3097, 3'-AGTTG-5', 3115, 3'-AGACC-5', 3121, 3'-GGTTG-5', 3261, 3'-AGATC-5', 3276, 3'-GGACA-5', 3389, 3'-AGACA-5', 3433, 3'-AGATA-5', 3465, 3'-AGATC-5', 3488, 3'-GGTTG-5', 3532, 3'-GGTTG-5', 3605, 3'-AGATG-5', 3620, 3'-AGATG-5', 3627, 3'-GGATA-5', 3655, 3'-GGACA-5', 3756, 3'-AGACC-5', 3761, 3'-GGTTG-5', 3804, 3'-GGTCG-5', 3813, 3'-GGACC-5', 3868, 3'-AGATG-5', 3919, 3'-GGTTG-5', 3945, 3'-GGATC-5', 4006, 3'-AGTTC-5', 4024, 3'-AGACC-5', 4030, 3'-AGTTG-5', 4096, 3'-AGTCC-5', 4126, 3'-GGATC-5', 4157, 3'-AGTTC-5', 4175, 3'-AGACA-5', 4181, 3'-AGACC-5', 4204, 3'-AGACG-5', 4235, 3'-GGATC-5', 4288, 3'-GGTCA-5', 4307, 3'-AGACC-5', 4365, 3'-AGTTC-5', 4417, 3'-GGACA-5', 4468, 3'-AGATC-5', 4475, 3'-AGTCC-5', 4500, 3'-AGACA-5', 4507, and their complements.
# positive strand in the positive direction is SuccessablesDPE++.bas, looking for 3'-A/G-G-A/T-C/T-A/C/G-5', 159, 3'-GGTCC-5' at 8, 3'-GGTCC-5' at 33, 3'-GGACC-5' at 40, 3'-AGTCC-5' at 90, 3'-AGACA-5' at 98, 3'-AGACC-5' at 102, 3'-GGACA-5' at 144, 3'-GGTTC-5' at 177, 3'-GGACG-5' at 191, 3'-GGTCC-5' at 215, 3'-AGACG-5' at 223, 3'-AGACC-5' at 270, 3'-GGACC-5' at 286, 3'-GGTCG-5' at 329, 3'-GGTCC-5' at 424, 3'-GGACG-5' at 435, 3'-AGTCG-5' at 511, 3'-GGTCC-5' at 515, 3'-GGACC-5' at 598, 3'-GGTTG-5' at 607, 3'-AGTCG-5' at 613, 3'-GGTCG-5' at 617, 3'-GGTCG-5' at 623, 3'-GGATG-5' at 649, 3'-GGTCC-5' at 707, 3'-GGACG-5' at 807, 3'-AGTCG-5' at 831, 3'-GGTTG-5' at 843, 3'-GGACC-5' at 847, 3'-GGACA-5' at 891, 3'-GGACG-5' at 907, 3'-AGTCG-5' at 931, 3'-GGTTG-5' at 943, 3'-GGACC-5' at 947, 3'-GGACA-5' at 991, 3'-GGACG-5' at 1075, 3'-GGACG-5' at 1118, 3'-GGTCG-5' at 1127, 3'-GGTCC-5' at 1175, 3'-GGATG-5' at 1195, 3'-GGACC-5' at 1199, 3'-GGTCA-5' at 1250, 3'-AGTCG-5' at 1267, 3'-GGTCG-5' at 1271, 3'-GGTTG-5' at 1279, 3'-GGATG-5' at 1283, 3'-GGACG-5' at 1311, 3'-GGTCG-5' at 1357, 3'-GGTCG-5' at 1363, 3'-GGACG-5' at 1369, 3'-AGACC-5' at 1376, 3'-AGACG-5' at 1395, 3'-GGACG-5' at 1411, 3'-GGTCG-5' at 1457, 3'-GGTCG-5' at 1463, 3'-GGACG-5' at 1469, 3'-AGACC-5' at 1476, 3'-AGACG-5' at 1495, 3'-GGATG-5' at 1573, 3'-AGTCG-5' at 1603, 3'-AGTTG-5' at 1621, 3'-AGACG-5' at 1733, 3'-GGACG-5' at 1776, 3'-GGACC-5' at 1815, 3'-GGTCC-5' at 1855, 3'-GGACA-5' at 1860, 3'-AGACC-5' at 1864, 3'-GGTCC-5' at 1893, 3'-AGACC-5' at 1992, 3'-GGTTG-5' at 2012, 3'-GGTCA-5' at 2024, 3'-GGTCG-5' at 2052, 3'-AGTCA-5' at 2060, 3'-AGTCA-5' at 2098, 3'-AGTCG-5' at 2102, 3'-AGTCC-5' at 2115, 3'-AGATC-5' at 2167, 3'-AGACA-5' at 2182, 3'-AGTCG-5' at 2198, 3'-AGTTA-5' at 2233, 3'-GGACA-5' at 2250, 3'-AGACA-5' at 2260, 3'-AGACA-5' at 2308, 3'-GGTCC-5' at 2316, 3'-AGTCC-5' at 2372, 3'-AGTCG-5' at 2390, 3'-GGTTC-5' at 2398, 3'-GGACC-5' at 2433, 3'-GGATC-5' at 2481, 3'-GGACC-5' at 2501, 3'-AGTTC-5' at 2508, 3'-GGACG-5' at 2520, 3'-AGTCG-5' at 2526, 3'-GGACC-5' at 2569, 3'-GGTCC-5' at 2574, 3'-GGTTC-5' at 2593, 3'-GGTCA-5' at 2605, 3'-AGTTC-5' at 2615, 3'-AGTCC-5' at 2620, 3'-GGTCC-5' at 2780, 3'-AGACG-5' at 2856, 3'-GGTCC-5' at 2876, 3'-AGACC-5' at 2883, 3'-GGACC-5' at 2891, 3'-GGTTA-5' at 2908, 3'-AGACA-5' at 2925, 3'-AGTCA-5' at 2936, 3'-AGACA-5' at 2957, 3'-AGACG-5' at 2975, 3'-AGACC-5' at 2983, 3'-GGACC-5' at 2988, 3'-GGTCA-5' at 2996, 3'-GGTCC-5' at 3016, 3'-AGACC-5' at 3021, 3'-AGTCC-5' at 3034, 3'-AGTCG-5' at 3041, 3'-GGACC-5' at 3047, 3'-AGACG-5' at 3060, 3'-GGTCA-5' at 3082, 3'-GGTCC-5' at 3111, 3'-AGTCG-5' at 3155, 3'-GGTCG-5' at 3239, 3'-AGATA-5' at 3258, 3'-AGACG-5' at 3267, 3'-AGACG-5' at 3278, 3'-AGTTG-5' at 3290, 3'-GGACC-5' at 3296, 3'-AGACG-5' at 3306, 3'-AGACG-5' at 3358, 3'-GGACC-5' at 3362, 3'-GGTCA-5' at 3379, 3'-AGACC-5' at 3405, 3'-AGTTA-5' at 3424, 3'-GGACA-5' at 3434, 3'-GGACC-5' at 3496, 3'-GGTCC-5' at 3536, 3'-GGACA-5' at 3617, 3'-GGACA-5' at 3622, 3'-GGTTG-5' at 3633, 3'-GGACC-5' at 3679, 3'-GGTCC-5' at 3687, 3'-GGTCG-5' at 3720, 3'-AGTCC-5' at 3728, 3'-GGACC-5' at 3758, 3'-AGTCG-5' at 3775, 3'-GGACC-5' at 3787, 3'-GGTCA-5' at 3841, 3'-AGTCC-5' at 3868, 3'-AGTCG-5' at 3997, 3'-AGTCG-5' at 4023, 3'-GGTCC-5' at 4032, 3'-AGTCG-5' at 4052, 3'-AGATC-5' at 4064, 3'-AGATC-5' at 4076, 3'-GGACG-5' at 4231, 3'-AGTCA-5' at 4271, 3'-GGACC-5' at 4409, 3'-AGACC-5' at 4416, 3'-GGACC-5' at 4424, and their complements.
# inverse, negative strand, negative direction, is SuccessablesDPEi--.bas, looking for 3'-A/C/G-C/T-A/T-G-A/G-5', 58, 3'-CCTGG-5', 32, 3'-ACAGA-5', 479, 3'-GTAGG-5', 593, 3'-ATTGG-5', 614, 3'-ACTGG-5', 734, 3'-GCAGA-5', 754, 3'-CTTGG-5', 846, 3'-ACAGA-5', 921, 3'-CTAGG-5', 973, 3'-CTTGG-5', 1012, 3'-ACTGA-5', 1051, 3'-ACAGA-5', 1087, 3'-GCTGG-5', 1191, 3'-ACAGA-5', 1222, 3'-CTTGG-5', 1303, 3'-GTTGG-5', 1407, 3'-CTAGA-5', 1482, 3'-GTTGG-5', 1514, 3'-ATAGG-5', 1529, 3'-GTAGG-5', 1572, 3'-CTTGA-5', 1685, 3'-ATAGA-5', 1731, 3'-GCAGA-5', 1774, 3'-CTAGG-5', 1813, 3'-GTAGG-5', 1838, 3'-GTAGA-5', 1863, 3'-CTTGG-5', 1956, 3'-ACAGA-5', 2031, 3'-ACAGA-5', 2165, 3'-ACTGG-5', 2189, 3'-GTAGA-5', 2290, 3'-CTTGG-5', 2382, 3'-CTTGG-5', 2717, 3'-ACTGA-5', 2786, 3'-GTTGG-5', 2844, 3'-GTTGA-5', 2911, 3'-ACAGA-5', 2986, 3'-GTAGA-5', 3154, 3'-CTTGG-5', 3245, 3'-ACAGA-5', 3321, 3'-CTTGA-5', 3460, 3'-GTTGA-5', 3524, 3'-GTAGA-5', 3551, 3'-CCTGA-5', 3640, 3'-GCAGG-5', 3698, 3'-CCTGA-5', 3747, 3'-CTTGG-5', 3784, 3'-ACAGA-5', 3833, 3'-GTTGA-5', 3849, 3'-CCTGG-5', 3868, 3'-GTAGG-5', 3903, 3'-GTAGA-5', 4058, 3'-ACAGA-5', 4210, 3'-CCTGA-5', 4327, 3'-ACAGA-5', 4371, 3'-CTTGG-5', 4451, 3'-GTAGG-5', 4456, 3'-CTAGG-5', 4476,
# inverse, negative strand, positive direction, is SuccessablesDPEi-+.bas, looking for 3'-A/C/G-C/T-A/T-G-A/G-5', 152 , 3'-CCAGG-5' at 8 , 3'-CCAGA-5' at 15 , 3'-ATTGG-5' at 24 , 3'-CCAGG-5' at 33 , 3'-CCTGG-5' at 40 , 3'-ACAGG-5' at 157 , 3'-GCAGG-5' at 194 , 3'-CCAGA-5' at 204 , 3'-CCAGG-5' at 215 , 3'-GCTGG-5' at 277 , 3'-CCTGG-5' at 286 , 3'-GCAGG-5' at 318 , 3'-ACTGG-5' at 347 , 3'-ACAGG-5' at 365 , 3'-GCAGG-5' at 379 , 3'-GCTGG-5' at 386 , 3'-GCAGA-5' at 396 , 3'-GCTGG-5' at 417 , 3'-CCAGG-5' at 424 , 3'-GCAGA-5' at 438 , 3'-CCAGA-5' at 468 , 3'-CCAGG-5' at 515 , 3'-ACAGG-5' at 552 , 3'-CCTGG-5' at 598 , 3'-GCAGG-5' at 658 , 3'-CCAGG-5' at 707 , 3'-CCTGA-5' at 725 , 3'-GCTGG-5' at 779 , 3'-CCAGA-5' at 835 , 3'-CCTGG-5' at 847 , 3'-CCTGA-5' at 859 , 3'-CCAGA-5' at 935 , 3'-CCTGG-5' at 947 , 3'-CCTGA-5' at 959 , 3'-ACTGG-5' at 1140 , 3'-CCAGG-5' at 1175 , 3'-CCTGG-5' at 1199 , 3'-ACTGA-5' at 1286 , 3'-GCAGA-5' at 1316 , 3'-GCAGA-5' at 1416 , 3'-CCAGA-5' at 1631 , 3'-CCTGA-5' at 1660 , 3'-CCTGA-5' at 1676 , 3'-GCTGG-5' at 1736 , 3'-CCAGA-5' at 1742 , 3'-GCTGG-5' at 1779 , 3'-GCAGG-5' at 1788 , 3'-CTTGG-5' at 1799 , 3'-CCTGG-5' at 1815 , 3'-CCAGG-5' at 1855 , 3'-GTAGG-5' at 1875 , 3'-CCAGG-5' at 1893 , 3'-GCAGG-5' at 1905 , 3'-GCAGA-5' at 1937 , 3'-ACTGG-5' at 1953 , 3'-ACAGG-5' at 1966 , 3'-ACAGG-5' at 2125 , 3'-GTTGG-5' at 2185 , 3'-CCTGA-5' at 2211 , 3'-CCAGA-5' at 2228 , 3'-GTAGG-5' at 2255 , 3'-GCAGG-5' at 2296 , 3'-CCAGG-5' at 2316 , 3'-GCTGG-5' at 2320 , 3'-GCTGG-5' at 2405 , 3'-ACAGA-5' at 2414 , 3'-CCTGG-5' at 2433 , 3'-CTAGG-5' at 2482 , 3'-CCTGG-5' at 2501 , 3'-GTTGG-5' at 2541 , 3'-ATAGG-5' at 2550 , 3'-CCTGG-5' at 2569 , 3'-CCAGG-5' at 2574 , 3'-ATAGA-5' at 2627 , 3'-CTAGG-5' at 2639 , 3'-ACAGA-5' at 2652 , 3'-ACTGA-5' at 2674 , 3'-GCAGG-5' at 2683 , 3'-GCAGA-5' at 2721 , 3'-GCTGG-5' at 2734 , 3'-GCAGG-5' at 2745 , 3'-GCTGG-5' at 2770 , 3'-CCAGG-5' at 2780 , 3'-GCTGG-5' at 2810 , 3'-GTTGG-5' at 2816 , 3'-ACAGA-5' at 2837 , 3'-GCAGA-5' at 2859 , 3'-CCAGG-5' at 2876 , 3'-CCTGG-5' at 2891 , 3'-GCTGA-5' at 2915 , 3'-CCTGA-5' at 2968 , 3'-CCTGG-5' at 2988 , 3'-CCAGG-5' at 3016 , 3'-CCTGG-5' at 3047 , 3'-CCAGA-5' at 3091 , 3'-CCAGG-5' at 3111 , 3'-ACTGG-5' at 3117 , 3'-GCAGG-5' at 3128 , 3'-ACAGA-5' at 3133 , 3'-GCAGG-5' at 3147 , 3'-ACAGA-5' at 3179 , 3'-GCAGA-5' at 3214 , 3'-CCAGA-5' at 3221 , 3'-GCTGG-5' at 3242 , 3'-CCTGG-5' at 3296 , 3'-ACTGG-5' at 3345 , 3'-CCTGG-5' at 3362 , 3'-GTAGA-5' at 3416 , 3'-GCAGG-5' at 3466 , 3'-GCAGA-5' at 3473 , 3'-CTAGG-5' at 3484 , 3'-CCTGG-5' at 3496 , 3'-CTAGG-5' at 3522 , 3'-GCTGG-5' at 3526 , 3'-CCAGG-5' at 3536 , 3'-CCAGA-5' at 3548 , 3'-ACAGG-5' at 3571 , 3'-GCTGA-5' at 3588 , 3'-ACAGG-5' at 3636 , 3'-GCAGG-5' at 3662 , 3'-CCTGG-5' at 3679 , 3'-CCAGG-5' at 3687 , 3'-GCAGG-5' at 3694 , 3'-ACTGA-5' at 3735 , 3'-GTAGG-5' at 3753 , 3'-CCTGG-5' at 3758 , 3'-GCAGG-5' at 3768 , 3'-GCTGA-5' at 3778 , 3'-CCTGG-5' at 3787 , 3'-CCAGA-5' at 3806 , 3'-GCAGA-5' at 3831 , 3'-CCAGA-5' at 3891 , 3'-GCAGA-5' at 3916 , 3'-ACAGG-5' at 3975 , 3'-GCTGG-5' at 3989 , 3'-CTTGA-5' at 4016 , 3'-CCAGG-5' at 4032 , 3'-GTAGA-5' at 4036 , 3'-CTAGA-5' at 4065 , 3'-ACAGG-5' at 4070 , 3'-CTAGG-5' at 4077 , 3'-ACTGA-5' at 4089 , 3'-CTTGA-5' at 4131 , 3'-ATTGA-5' at 4161 , 3'-GCTGG-5' at 4177 , 3'-CCTGA-5' at 4186 , 3'-CCTGA-5' at 4214 , 3'-CTTGG-5' at 4300 , 3'-GCAGA-5' at 4317 , 3'-CCAGA-5' at 4330 , 3'-CCTGG-5' at 4409 , 3'-CCTGG-5' at 4424.
# inverse, positive strand, negative direction, is SuccessablesDPEi+-.bas, looking for 3'-A/C/G-C/T-A/T-G-A/G-5', 174, 3'-ACAGA-5', 13, 3'-ACTGA-5', 17, 3'-GTTGA-5', 85, 3'-ATAGA-5', 100, 3'-GTAGG-5', 119, 3'-ACTGA-5', 130, 3'-GCTGA-5', 140, 3'-ACAGA-5', 168, 3'-CCAGG-5', 262, 3'-GTAGA-5', 284, 3'-ACAGA-5', 289, 3'-ACTGA-5', 307, 3'-CTTGG-5', 328, 3'-ATAGA-5', 355, 3'-ACAGG-5', 424, 3'-CCTGG-5', 459, 3'-CCTGG-5', 508, 3'-ACAGG-5', 561, 3'-GCAGG-5', 565, 3'-ATTGA-5', 585, 3'-CCTGG-5', 596, 3'-ATTGG-5', 643, 3'-CCAGG-5', 648, 3'-GCAGG-5', 697, 3'-CCTGA-5', 732, 3'-GCTGG-5', 781, 3'-GCTGA-5', 825, 3'-GCAGG-5', 831, 3'-CTTGA-5', 843, 3'-CCAGG-5', 850, 3'-CCTGG-5', 899, 3'-ACAGA-5', 907, 3'-CCAGG-5', 948, 3'-GTAGA-5', 970, 3'-GCTGA-5', 991, 3'-GCAGG-5', 997, 3'-CTTGA-5', 1009, 3'-CCTGG-5', 1015, 3'-GCAGA-5', 1023, 3'-ATTGG-5', 1045, 3'-ACAGA-5', 1073, 3'-GCTGG-5', 1111, 3'-CCTGA-5', 1173, 3'-CCTGG-5', 1198, 3'-GCTGA-5', 1282, 3'-GCAGG-5', 1288, 3'-CTTGA-5', 1300, 3'-CTAGG-5', 1307, 3'-GCAGA-5', 1314, 3'-CCAGA-5', 1411, 3'-CCAGG-5', 1460, 3'-GCTGG-5', 1464, 3'-CCAGA-5', 1518, 3'-ACAGA-5', 1567, 3'-GCAGA-5', 1614, 3'-CCTGA-5', 1623, 3'-CTTGG-5', 1649, 3'-GTAGA-5', 1653, 3'-CCAGA-5', 1670, 3'-ATAGA-5', 1710, 3'-GCTGG-5', 1746, 3'-GCTGG-5', 1756, 3'-GCTGA-5', 1800, 3'-GCAGG-5', 1823, 3'-CCTGG-5', 1841, 3'-GTTGA-5', 1853, 3'-GCTGG-5', 1891, 3'-CTTGG-5', 1927, 3'-ACTGA-5', 1935, 3'-GCAGG-5', 1941, 3'-CCTGG-5', 1959, 3'-GCAGA-5', 1967, 3'-CCTGG-5', 2009, 3'-ACAGA-5', 2017, 3'-GCTGG-5', 2069, 3'-CCAGG-5', 2077, 3'-GCTGA-5', 2109, 3'-ACAGA-5', 2119, 3'-CTTGA-5', 2127, 3'-GCTGA-5', 2226, 3'-GTTGG-5', 2235, 3'-CCTGG-5', 2268, 3'-GCTGG-5', 2326, 3'-GCTGA-5', 2361, 3'-GCAGG-5', 2367, 3'-CTTGA-5', 2379, 3'-CCTGG-5', 2385, 3'-GCAGG-5', 2389, 3'-CCTGG-5', 2435, 3'-ACAGA-5', 2443, 3'-ACAGG-5', 2514, 3'-CCAGG-5', 2519, 3'-GCTGA-5', 2562, 3'-GCAGG-5', 2568, 3'-CTTGA-5', 2580, 3'-GTTGA-5', 2593, 3'-ACAGG-5', 2689, 3'-GCTGA-5', 2696, 3'-GTTGA-5', 2705, 3'-CTTGA-5', 2714, 3'-CCTGG-5', 2720, 3'-GCTGA-5', 2744, 3'-CCTGG-5', 2770, 3'-ACAGA-5', 2778, 3'-ACAGA-5', 2878, 3'-ATAGA-5', 2903, 3'-CTTGG-5', 2921, 3'-GCTGG-5', 3035, 3'-GCTGG-5', 3041, 3'-GCTGA-5', 3085, 3'-CTTGA-5', 3103, 3'-GTTGG-5', 3116, 3'-CCTGG-5', 3128, 3'-GCTGG-5', 3180, 3'-GCTGA-5', 3224, 3'-CTTGA-5', 3242, 3'-CCAGG-5', 3249, 3'-GTAGA-5', 3256, 3'-CCTGG-5', 3298, 3'-ATTGA-5', 3358, 3'-CTTGA-5', 3401, 3'-ATAGA-5', 3422, 3'-GCAGA-5', 3431, 3'-ATAGG-5', 3447, 3'-CTAGA-5', 3463, 3'-CCAGA-5', 3486, 3'-GTTGA-5', 3505, 3'-ATTGG-5', 3529, 3'-GTTGA-5', 3533, 3'-ACTGA-5', 3542, 3'-CCAGG-5', 3564, 3'-CTTGA-5', 3571, 3'-CCAGG-5', 3585, 3'-GCAGA-5', 3589, 3'-GTTGG-5', 3606, 3'-GCTGA-5', 3649, 3'-ACAGA-5', 3672, 3'-GCTGG-5', 3719, 3'-CCTGG-5', 3744, 3'-ACTGG-5', 3749, 3'-CCTGA-5', 3781, 3'-CTTGG-5', 3793, 3'-GTTGA-5', 3805, 3'-GTAGA-5', 3820, 3'-GCTGG-5', 3864, 3'-CCAGG-5', 3871, 3'-CCAGG-5', 3885, 3'-CCTGG-5', 3906, 3'-ACAGA-5', 3917, 3'-CCTGA-5', 3932, 3'-GTTGG-5', 3942, 3'-GTTGG-5', 3946, 3'-CCAGG-5', 3951, 3'-GCTGA-5', 3994, 3'-CTTGA-5', 4012, 3'-CCTGG-5', 4037, 3'-ATAGA-5', 4079, 3'-GTTGG-5', 4097, 3'-CCAGG-5', 4102, 3'-GCTGA-5', 4145, 3'-CCAGG-5', 4170, 3'-CTTGG-5', 4188, 3'-CCAGA-5', 4233, 3'-CCAGG-5', 4253, 3'-CTTGG-5', 4268, 3'-GCTGA-5', 4276, 3'-GCAGG-5', 4282, 3'-CTTGA-5', 4294, 3'-CCTGG-5', 4300, 3'-CCTGG-5', 4349, 3'-CCAGA-5', 4448, 3'-CCTGG-5', 4494, 3'-ACAGA-5', 4518, 3'-CCTGG-5', 4546,
# inverse, positive strand, positive direction, is SuccessablesDPEi++.bas, looking for 3'-A/C/G-C/T-A/T-G-A/G-5', 95, 3'-GTAGG-5' at 30, 3'-CCTGG-5' at 37, 3'-ACAGG-5' at 82, 3'-ACAGA-5' at 100, 3'-CCTGG-5' at 187, 3'-CCAGG-5' at 218, 3'-ACAGA-5' at 268, 3'-GTTGG-5' at 608, 3'-GTAGG-5' at 629, 3'-GTAGG-5' at 698, 3'-CCTGA-5' at 746, 3'-CCTGA-5' at 814, 3'-GTTGG-5' at 844, 3'-CTAGG-5' at 865, 3'-ACAGG-5' at 893, 3'-GCTGA-5' at 898, 3'-CCTGA-5' at 914, 3'-GTTGG-5' at 944, 3'-CTAGG-5' at 965, 3'-ACAGG-5' at 993, 3'-GCTGA-5' at 998, 3'-GTTGG-5' at 1280, 3'-GCAGA-5' at 1393, 3'-GCAGA-5' at 1493, 3'-GTTGG-5' at 1616, 3'-ACTGG-5' at 1662, 3'-CCAGA-5' at 1711, 3'-ACAGA-5' at 1731, 3'-CTTGG-5' at 1811, 3'-ACAGA-5' at 1862, 3'-GCAGG-5' at 1930, 3'-CTTGA-5' at 1951, 3'-CCAGA-5' at 1958, 3'-GTTGG-5' at 2013, 3'-ACAGA-5' at 2078, 3'-GTAGA-5' at 2111, 3'-GTTGG-5' at 2120, 3'-ACAGA-5' at 2172, 3'-ACTGG-5' at 2213, 3'-CTTGG-5' at 2225, 3'-CCAGA-5' at 2258, 3'-CCTGA-5' at 2271, 3'-GCTGA-5' at 2359, 3'-CTAGG-5' at 2378, 3'-ACAGA-5' at 2466, 3'-CCAGA-5' at 2489, 3'-CTAGG-5' at 2514, 3'-CTTGG-5' at 2579, 3'-CCTGA-5' at 2672, 3'-CTTGG-5' at 2776, 3'-CCTGA-5' at 2820, 3'-GTAGA-5' at 2852, 3'-ACTGG-5' at 2873, 3'-CCAGA-5' at 2941, 3'-ACTGA-5' at 2945, 3'-ACAGA-5' at 3004, 3'-CCAGA-5' at 3019, 3'-ACTGA-5' at 3029, 3'-ACAGA-5' at 3053, 3'-GTAGG-5' at 3108, 3'-CCTGG-5' at 3172, 3'-GCAGG-5' at 3203, 3'-CCAGA-5' at 3245, 3'-GCAGA-5' at 3256, 3'-GTTGA-5' at 3291, 3'-CCAGA-5' at 3299, 3'-GTAGA-5' at 3329, 3'-ATAGG-5' at 3384, 3'-ACAGA-5' at 3392, 3'-GTAGA-5' at 3403, 3'-CCTGG-5' at 3545, 3'-ACAGG-5' at 3577, 3'-CCAGA-5' at 3608, 3'-ACAGG-5' at 3619, 3'-GTAGG-5' at 3629, 3'-ACTGG-5' at 3714, 3'-ATTGA-5' at 3733, 3'-CCAGA-5' at 3771, 3'-ACTGG-5' at 3784, 3'-GCTGA-5' at 3801, 3'-CTTGG-5' at 3838, 3'-CTTGG-5' at 3856, 3'-GTTGG-5' at 3911, 3'-CTTGG-5' at 3937, 3'-ACTGG-5' at 4018, 3'-CTTGA-5' at 4048, 3'-GCAGA-5' at 4056, 3'-CTAGG-5' at 4081, 3'-GTAGG-5' at 4183, 3'-ACTGG-5' at 4216, 3'-GCTGG-5' at 4358, 3'-ACAGG-5' at 4367, 3'-CCAGA-5' at 4380, 3'-CCAGA-5' at 4414, 3'-CCAGG-5' at 4420.
{{clear}}

==DREB boxes==
{{main|DREB box gene transcriptions}}
There are no dehydration-responsive element-binding (DREB) boxes in either promoter.

==E2 boxes==
{{main|E2 box gene transcriptions}}
Negative strand in the negative direction there are 5: 3'-ACAGATGT-5', 482, 3'-ACAGATGT-5', 1225, 3'-GCAGTTGG-5', 1514, 3'-ACAGATGT-5', 2989, 3'-ACAGATGT-5', 4213, in the distal promoter.

Positive strand in the negative direction there are 2: 3'-GCAGGTGG-5', 2571, 3'-ACAGATGA-5', 3920.

Inverse complement, negative strand, negative direction there is 1: 3'-CCACCTGT-5', 2117.

Inverse complement, positive strand, negative direction there are 4: 3'-CCACCTGT-5', 394, 3'-ACACCTGT-5', 1131, 3'-GCAACTGC-5', 3851, 3'-ACACCTGT-5', 3970

Negative strand in the positive direction there is 1: 3'-GCAGATGA-5', 37.

==EIF4E basal elements==
{{main|EIF4E basal element gene transcriptions}}
There are no EIF4E basal element, also eIF4E, (4EBE), in either promoter.

==Enhancer boxes==
{{main|Enhancer box gene transcriptions}}

===Core promoters===

Negative strand in the positive direction there are 2: 3'-CACATG-5', 4364, 3'-CACATG-5', 4370.

===Proximal promoters===

Positive strand, negative direction there is 1: 3'-CACATG-5' at 4247.

Negative strand, positive direction there are 2: 3'-CACATG-5', 4153, 3'-CACATG-5', 4221.

===Distal promoters===

Negative strand in the negative direction there are 4: 3'-CACATG-5' at 324, 3'-CACATG-5' at 797, 3'-CACATG-5' at 2213, and 3'-CACATG-5' at 2342.

Positive strand in the negative direction there are 17, 3'-CACATG-5' at 123, 3'-CACATG-5' at 200, 3'-CACATG-5' at 952, 3'-CACATG-5' at 1206, 3'-CACATG-5' at 1849, 3'-CACATG-5' at 1952, 3'-CACATG-5' at 2151, 3'-CACATG-5' at 2276, 3'-CACATG-5' at 2322, 3'-CACATG-5' at 2533, 3'-CACATG-5' at 2613, 3'-CACATG-5' at 2667, 3'-CACATG-5' at 2751, 3'-CACATG-5' at 2783, 3'-CACATG-5' at 4106, 3'-CACATG-5' at 4116.

Negative strand in the positive direction there are 17: 3'-CACATG-5', 1186, 3'-CACATG-5', 1238, 3'-CACATG-5', 1871, 3'-CACATG-5', 1933, 3'-CACATG-5', 2031, 3'-CACATG-5', 2140, 3'-CACATG-5', 2153, 3'-CACATG-5', 2266, 3'-CACATG-5', 2473, 3'-CACATG-5', 3140, 3'-CACATG-5', 3335, 3'-CACATG-5', 3580, 3'-CACATG-5', 3707, 3'-CACATG-5', 3742, 3'-CACATG-5', 3827, 3'-CACATG-5', 3900, 3'-CACATG-5', 3956.

Positive strand in the positive direction there are 4: 3'-CACATG-5', 126, 3'-CACATG-5', 565, 3'-CACATG-5', 2596, 3'-CACATG-5', 3114.

==F boxes==
{{main|F box gene transcriptions}}

==GAAC elements==
{{main|GAAC element gene transcriptions}}
# negative strand in the negative direction, looking for 3'-GAACT-5', 13, 3'-GAACT-5', 843, 3'-GAACT-5', 1009, 3'-GAACT-5', 1300, 3'-GAACT-5', 2127, 3'-GAACT-5', 2379, 3'-GAACT-5', 2580, 3'-GAACT-5', 2714, 3'-GAACT-5', 3103, 3'-GAACT-5', 3242, 3'-GAACT-5', 3401, 3'-GAACT-5', 3571, 3'-GAACT-5', 4012, 3'-GAACT-5', 4294,
# negative strand in the positive direction, looking for 3'-GAACT-5', 1, 3'-GAACT-5', 609,
# positive strand in the negative direction, looking for 3'-GAACT-5', 2, 3'-GAACT-5', 1685, 3'-GAACT-5', 3460,
# positive strand in the positive direction, looking for 3'-GAACT-5', 2, 3'-GAACT-5', 577, 3'-GAACT-5', 692,
# complement, negative strand, negative direction, looking for 3'-CTTGA-5', 2, 3'-CTTGA-5', 1685, 3'-CTTGA-5', 3460,
# complement, negative strand, positive direction, looking for 3'-CTTGA-5', 2, 3'-CTTGA-5', 577, 3'-CTTGA-5', 692,
# complement, positive strand, negative direction, looking for 3'-CTTGA-5', 13, 3'-CTTGA-5', 843, 3'-CTTGA-5', 1009, 3'-CTTGA-5', 1300, 3'-CTTGA-5', 2127, 3'-CTTGA-5', 2379, 3'-CTTGA-5', 2580, 3'-CTTGA-5', 2714, 3'-CTTGA-5', 3103, 3'-CTTGA-5', 3242, 3'-CTTGA-5', 3401, 3'-CTTGA-5', 3571, 3'-CTTGA-5', 4012, 3'-CTTGA-5', 4294,
# complement, positive strand, positive direction, looking for 3'-CTTGA-5', 1, 3'-CTTGA-5', 609,
# inverse complement, negative strand, negative direction, looking for 3'-AGTTC-5', 3, 3'-AGTTC-5', 3844, 3'-AGTTC-5', 4027, 3'-AGTTC-5', 4178,
# inverse complement, negative strand, positive direction, looking for 3'-AGTTC-5', 1, 3'-AGTTC-5', 761,
# inverse complement, positive strand, negative direction, looking for 3'-AGTTC-5', 6, 3'-AGTTC-5', 253, 3'-AGTTC-5', 719, 3'-AGTTC-5', 1177, 3'-AGTTC-5', 4024, 3'-AGTTC-5', 4175, 3'-AGTTC-5', 4417,
# inverse complement, positive strand, positive direction, looking for 3'-AGTTC-5', 0,
# inverse, negative strand, negative direction, looking for 3'-TCAAG-5', 6, 3'-TCAAG-5', 253, 3'-TCAAG-5', 719, 3'-TCAAG-5', 1177, 3'-TCAAG-5', 4024, 3'-TCAAG-5', 4175, 3'-TCAAG-5', 4417,
# inverse, negative strand, positive direction, looking for 3'-TCAAG-5', 0,
# inverse, positive strand, negative direction, looking for 3'-TCAAG-5', 3, 3'-TCAAG-5', 3844, 3'-TCAAG-5', 4027, 3'-TCAAG-5', 4178,
# inverse, positive strand, positive direction, looking for 3'-TCAAG-5', 1, 3'-TCAAG-5', 761.

==GA responsive elements==
{{main|GARE gene transcriptions}}
Only one GARE (an inverse) occurs: between ZSCAN22 and A1BG 3'-AAACAAT-5' at 230 nts and its complement.

==GATA boxes==
{{main|GATA gene transcriptions}}

===Proximal promoters===

Inverse complement, negative strand, positive direction there is 1: 3'-TTTATCAC-5', 4125.

===Distal promoters===

Positive strand in the negative direction there are 2: 3'-GGGATAGA-5', 100, 3'-ATGATAGA-5', 355.

Inverse complement, negative strand, negative direction there is 1: 3'-GTTATCAT-5', 2500.

Inverse complement, positive strand, negative direction there is 1: 3'-TTTATCTT-5', 1732.

Inverse complement, negative strand, positive direction there is 1: 3'-GTTATCCC-5', 3385.

Inverse complement, positive strand, positive direction there are 2: 3'-GCTATCAG-5', 1840, 3'-TTTATCTT-5', 2628.

==G boxes==
{{main|G box gene transcriptions}}
There are no G boxes in either promoter.

==GC boxes==
{{main|GC box gene transcriptions}}
Positive strand in the negative direction there are 2; 3'-TGGGCGTGGT-5', 1898, 3'-TGGGCGTGGT-5', 3048, in the distal promoter.

Inverse complement, negative strand, negative direction there is 1: 3'-ACTCCGCCCA-5', 3092.

Inverse complement, positive strand, negative direction there is 1: 3'-GCTCCGCCTC-5', 1505.

Negative strand in the positive direction there is 1: 3'-TGGGCGGGAC-5', 409.

Inverse complement, positive strand, positive direction there is 1:, 3'-GCCACGCCCC-5', 491.

==GCC boxes==

The GCC box is the same as the AGC box.

==GLM boxes==
{{main|GLM box gene transcriptions}}
There are no GCN4-like motif (GLM) boxes in either promoter.

==Grainy head transcription factor binding sites==
{{main|Grainy head gene transcriptions}}

==H boxes==
{{main|H box gene transcriptions}}

===Core promoters===

Between ZSCAN22 and A1BG: There is one inverse and its complement 3'-AGGAGA-5' at 4428 nts.

Between ZNF497 and A1BG: There is an inverse and its complement 3'-AGGACA-5' at 4252. There is five after the TSS: 3'-AGAGAA-5' at 4387, 3'-AGTACA-5' at 4365, 3'-ACCAGA-5' at 4380, 3'-AAGAGA-5' at 4386, 3'-ACGACA-5' at 4392 and their complements.

===Proximal promoters===

Between ZSCAN22 and A1BG: There is one H box (3'-ANANNA-5'): negative direction, negative strand, 3'-ACACGA-5' at 4402. On the positive strand in the negative direction there are 16: 3'-ACAAAA-5' at 4216, 3'-AAAAAA-5' at 4218, 3'-AAAATA-5' at 4220, 3'-AAATAA-5' at 4221, 3'-ATAATA-5' at 4223, 3'-AAAAAA-5' at 4378, 3'-AAAAGA-5' at 4380, 3'-AAAGAA-5' at 4381, 3'-AGAAAA-5' at 4383, 3'-AAAAAA-5'at 4385, 3'-AAAAGA-5' at 4387, 3'-AAAGAA-5' at 4388, 3'-AGAAAA-5' at 4390, 3'-AAAAGA-5' at 4392, 3'-AAAGAA-5' at 4393, and 3'-AGAAAA-5' at 4395, with their complements on the negative strand, negative direction.

Between ZNF497 and A1BG: There is one H box (3'-ANANNA-5'): 3'-AGAGAA-5' at 4387 in the proximal promoter, negative strand, positive direction. There are four: 3'-TCATGT-5' at 4365, 3'-TGGTCT-5' at 4380, 3'-TTCTCT-5' at 4386, and 3'-TGCTGT-5' at 4392 and their complements in the positive direction.

===Distal promoters===

Between ZSCAN22 and A1BG, negative strand, negative direction: 3'-AGAGGA-5' at 3387, 3'-AGAGGA-5' at 3638, and 3'-AGAGGA-5' at 3675. One inverse and its complement 3'-AGGAGA-5' at 3790. There are 14 H boxes: 3'-ACACCA-5' at 788, 3'-ACATCA-5' at 2541, 3'-ACACCA-5' at 2659, 3'-ACATTA-5' at 2675, 3'-ATAAAA-5' at 2853, 3'-AAAGTA-5' at 2886, 3'-ACATTA-5' at 3064, 3'-AGATGA-5' at 3159, 3'-ACACCA-5' at 3187, 3'-AGAAGA-5' at 3554, 3'-AGACGA-5' at 3707, 3'-ACACCA-5' at 3811, 3'-ACATTA-5' at 3973, and 3'-ACATCA-5' at 4124.

On the positive strand, negative direction, there are 127 H boxes: 3'-ACCACA-5' at 608, 3'-ACCACA-5' at 793, 3'-ACACCA-5' at 883, 3'-ACCACA-5', 1477, 3'-ACACCA-5' at 2419, 3'-AAAAAA-5' at 2461, 3'-AAAAAA-5' at 2462, 3'-AAAAAA-5' at 2463, 3'-AAAAAA-5' at 2464, 3'-AAAAAA-5' at 2465, 3'-AAAAAA-5' at 2466, 3'-AAAAAA-5' at 2467, 3'-AAAAAA-5' at 2468, 3'-AAAAAA-5' at 2469, 3'-AAAAAA-5' at 2470, 3'-AAAGCA-5' at 2473, 3'-AAAGCA-5' at 2479, 3'-AAACAA-5' at 2484, 3'-AAACAA-5' at 2488, 3'-ACAAAA-5' at 2490, 3'-ATAGTA-5' at 2500, 3'-AGAAAA-5' at 2506, 3'-AAAACA-5' at 2508, 3'-AAACAA-5' at 2509, 3'-AGACCA-5' at 2599, 3'-ATACAA-5' at 2642, 3'-ACAAAA-5' at 2644, 3'-AAATCA-5' at 2648, 3'-ACAGGA-5' at 2690, 3'-AAATCA-5' at 2749, 3'-AGAGCA-5' at 2781, 3'-AAAAGA-5' at 2798, 3'-AAAGAA-5' at 2799, 3'-AAAGAA-5' at 2803, 3'-AGAAAA-5' at 2805, 3'-AAAAGA-5' at 2807, 3'-AGAGAA-5' at 2810, 3'-AGAAGA-5' at 2812, 3'-AGAAAA-5' at 2815, 3'-AAAAAA-5' at 2817, 3'-AAAAGA-5' at 2819, 3'-AAAGAA-5' at 2820, 3'-AGAAAA-5' at 2822, 3'-AAAAGA-5' at 2824, 3'-AGAGAA-5' at 2827, 3'-AGAAGA-5' at 2829, 3'-AGAAAA-5' at 2832, 3'-AAAAAA-5' at 2834, 3'-AAAAGA-5' at 2836, 3'-AAAGAA-5' at 2837, 3'-AGAAAA-5' at 2839, 3'-AAAACA-5' at 2841, 3'-AAACAA-5' at 2842, 3'-AAAATA-5' at 2868, 3'-ATATAA-5' at 2873, 3'-AAAAAA-5' at 2929, 3'-ACATCA-5' at 2941, 3'-ACATTA-5' at 2951, 3'-AAACCA-5' at 2971, 3'-AAAATA-5' at 3012, 3'-AAATAA-5' at 3013, 3'-AAAAAA-5' at 3026, 3'-AAACTA-5' at 3029, 3'-AGACCA-5' at 3122, 3'-AAAACA-5' at 3166, 3'-ACATAA-5' at 3169, 3'-ATAAAA-5' at 3171, 3'-AAATTA-5' at 3175, 3'-AGATCA-5' at 3277, 3'-ACAAGA-5' at 3307, 3'-AGAGCA-5' at 3310, 3'-AAAACA-5' at 3329, 3'-AAACAA-5' at 3330, 3'-AAATAA-5' at 3334, 3'-AAACAA-5' at 3338, 3'-ACAAGA-5' at 3340, 3'-AGAAAA-5' at 3343, 3'-AAACCA-5' at 3365, 3'-AGAGGA-5' at 3387, 3'-ACATCA-5' at 3394, 3'-AGAGAA-5' at 3406, 3'-ACATCA-5' at 3415, 3'-ACATTA-5' at 3436, 3'-ATATTA-5' at 3454, 3'-ATATTA-5' at 3468, 3'-AAACCA-5' at 3484, 3'-AGATCA-5' at 3489, 3'-AAAACA-5' at 3511, 3'-ACACAA-5' at 3514, 3'-ATAATA-5' at 3538, 3'-ACAAGA-5' at 3635, 3'-AGAGGA-5' at 3638, 3'-AAAGAA-5' at 3666, 3'-AGAACA-5' at 3668, 3'-AGAGGA-5' at 3675, 3'-ACAAGA-5' at 3759, 3'-AGACCA-5' at 3762, 3'-ACCACA-5' at 3764, 3'-ACAAAA-5' at 3767, 3'-AGAGCA-5' at 3913, 3'-AGATGA-5' at 3920, 3'-AGACCA-5' at 4031, 3'-ACAAAA-5' at 4066, 3'-AAAAAA-5' at 4068, 3'-AAAATA-5' at 4070, 3'-AAATAA-5' at 4071, 3'-AAATAA-5' at 4075, 3'-ATAATA-5' at 4077, 3'-ATAGAA-5' at 4080, 3'-AAAGAA-5' at 4084, 3'-AGAAAA-5' at 4086, 3'-AGACAA-5' at 4182, 3'-ACAAAA-5' at 4216, 3'-AAAAAA-5' at 4218, 3'-AAAATA-5' at 4220, 3'-AAATAA-5' at 4221, 3'-ATAATA-5' at 4223, 3'-AAAAAA-5' at 4378, 3'-AAAAGA-5' at 4380, 3'-AAAGAA-5' at 4381, 3'-AGAAAA-5' at 4383, 3'-AAAAAA-5' at 4385, 3'-AAAAGA-5' at 4387, 3'-AAAGAA-5' at 4388, 3'-AGAAAA-5' at 4390, 3'-AAAAGA-5' at 4392, 3'-AAAGAA-5' at 4393, and 3'-AGAAAA-5' at 4395.

Between ZNF497 and A1BG: There are two H boxes after nucleotide number 2300 in the negative strand and positive direction: 3'-ACCACA-5' at 420, 3'-ACACCA-5' at 386, 3'-TGGTGT-5' at 511, 3'-TGGTGT-5' at 530, 3'-ACACCA-5' at 2603 and 3'-ACACCA-5' at 3825.

There are two H boxes after nucleotide number 2300 in the positive strand and positive direction: 3'-ACACCA-5' at 204, 3'-ACACCA-5' at 528, 3'-ACACCA-5' at 3643 and 3'-ACACCA-5' at 3967.

Regarding 3'-ANANNA-5', on the negative strand, positive direction, there are 25 H boxes: 3'-ATACCA-5' at 2591, 3'-ACACCA-5' at 2603, 3'-ATAGAA-5' at 2628, 3'-AAACCA-5' at 2632, 3'-ACACTA-5'at 2637, 3'-ATATAA-5' at 2662, 3'-AGAGCA-5' at 2704, 3'-AGAGGA-5' at 2793, 3'-AAAGGA-5' at 2829, 3'-ACAGAA-5' at 2838, 3'-AAAGAA-5' at 3066, 3'-AGAACA-5' at 3094, 3'-AGAGCA-5' at 3138, 3'-ACAGCA-5' at 3212, 3'-ACAGTA-5' at 3414, 3'-AGATGA-5' at 3476, 3'-ACAGGA-5' at 3572, 3'-AAAGCA-5' at 3599, 3'-ACATGA-5' at 3708, 3'-ACACCA-5' at 3825, 3'-AAAAGA-5' at 3929, 3'-AGAACA-5' at 4068, 3'-AAATGA-5' at 4094, 3'-ACATCA-5' at 4116, and 3'-ACATGA-5' at 4154.

On the positive strand, positive direction there are 20 H boxes: 3'-AAATAA-5' at 2347, 3'-AAAAAA-5' at 2451, 3'-AAAACA-5' at 2453, 3'-AGACGA-5' at 2976, 3'-AGACCA-5' at 3022, 3'-AGAGAA-5' at 3056, 3'-AGAAGA-5' at 3058, 3'-AGAGGA-5' at 3302, 3'-AGACGA-5' at 3307, 3'-ACAGAA-5' at 3393, 3'-AGAAGA-5' at 3395, 3'-ACAGGA-5' at 3620, 3'-ACACCA-5' at 3643, 3'-AAACCA-5' at 3948, 3'-ACACCA-5' at 3967, 3'-AGAGGA-5' at 4059, 3'-AAAATA-5' at 4122, 3'-AAATCA-5' at 4137, 3'-AAATAA-5' at 4142, and 3'-ATATTA-5' at 4168.

There inverses on the negative strand in the positive direction of 31 H boxes: 3'-ATGACA-5' at 2412, 3'-ACTACA-5' at 2428, 3'-AGGACA-5' at 2460, 3'-ATTATA-5' at 2548, 3'-ACCACA-5' at 2600, 3'-AGGAAA-5' at 2623, 3'-AATAGA-5' at 2627, 3'-ACCACA-5' at 2634, 3'-AACAGA-5' at 2652, 3'-AGCAAA-5' at 2706, 3'-AGGAAA-5' at 2831, 3'-AACACA-5' at 2835, 3'-ATGACA-5' at 2843, 3'-AGAACA-5' at 3094, 3'-AACACA-5' at 3096, 3'-AGGACA-5' at 3131, 3'-ACCAAA-5' at 3175, 3'-AACAGA-5' at 3179, 3'-AGCAGA-5' at 3214, 3'-AGTAGA-5' at 3416, 3'-AATAAA-5' at 3427, 3'-ACCAGA-5' at 3548, 3'-ATGACA-5' at 3569, 3'-AGGAGA-5' at 3650, 3'-AGCACA-5' at 3740, 3'-ACCACA-5' at 3859, 3'-AAAAGA-5' at 3929, 3'-AGAACA-5' at 4068, 3'-ATCATA-5' at 4149, and 3'-ATTATA-5' at 4166.

==HMG boxes==
{{main|HMG box gene transcriptions}}

==HNF6s==
{{main|HNF gene transcriptions}}

===Core promoters===

Inverse complement, positive strand, negative direction there is 1: 3'-TTATTAATTC-5', 4542.

===Proximal promoters===

Negative strand in the negative direction there is 1: 3'-TTATTAATCG-5', 4229.

Negative strand in the positive direction there are 2: 3'-TTATTAATCA-5', 4147, 3'-TTATTGATTA-5', 4164.

Inverse complement, positive strand, positive direction there are 1: 3'-ATATTAACAA-5', 4172.

===Distal promoters===

Negative strand in the negative direction there are 2: 3'-GTGTTAATAA-5', 1725, 3'-TAGTTGATAA-5', 3527.

Positive strand in the negative direction there is 1: 3'-AAATTGATAA-5', 3361.

Inverse complement, negative strand, negative direction there are 2: 3'-ACATGGACAT-5', 802, 3'-TAATGAACTT-5', 1301.

Inverse complement, positive strand, negative direction there are 2: 3'-AAATTGATAA-5', 3361, 3'-TCATCAACTA-5', 3525.

Negative strand in the positive direction there are 1: 3'-ATGTCCATGG-5', 3581.

Positive strand in the positive direction there is 1: 3'-GAGTCCATTG-5', 3732.

Inverse complement, positive strand, positive direction there is 1: 3'-CCATTGACTC-5', 3736.

==HY boxes==
{{main|HY box gene transcriptions}}

===Core promoters===

Positive strand in the negative direction there is 1: 3'-TGAGGG-5' at 4558.

Inverse complement, negative strand, negative direction there is 1: 3'-CCCTCA-5', 4498.

Negative strand in the positive direction there is 1: 3'-TGTGGG-5', 4395.

===Distal promoters===

Negative strand in the negative direction there is 1: 3'-TGTGGG-5' at 749.

Positive strand in the negative direction there are 4: 3'-TGAGGG-5' at 88, 3'-TGAGGG-5' at 2699, 3'-TGAGGG-5' at 3652, 3'-TGTGGG-5' at 3712.

Inverse complement, negative strand, negative direction there are 3: 3'-CCCTCA-5', 2702, 3'-CCCACA-5', 3184, 3'-CCCTCA-5', 3889.

Positive strand in the positive direction there are 2: 3'-TGTGGG-5', 2965, 3'-TGTGGG-5', 3533.

Negative strand in the positive direction there are 3: 3'-TGAGGG-5', 258, 3'-TGAGGG-5', 3479, 3'-TGAGGG-5', 3879.

Inverse complement, negative strand, positive direction there are 3: 3'-CCCTCA-5', 88, 3'-CCCTCA-5', 3207, 3'-CCCTCA-5', 3503.

Inverse complement, positive strand, positive direction there is 5: 3'-CCCTCA-5', 494, 3'-CCCTCA-5', 662, 3'-CCCTCA-5', 1783, 3'-CCCACA-5', 1803, 3'-CCCTCA-5', 3185.

==I boxes==
{{main|I box gene transcriptions}}

==Initiator elements (YYANWYY)==
{{main|Initiator element gene transcriptions}}

===Core promoters===

There is the following Inr in the core promoter, negative strand, negative direction: 3'-TTACTCC-5' at 4557.

There are four Inrs in the core promoter, positive strand, negative direction: 3'-CCACTCC-5' at 4425, 3'-CCACTTT-5' at 4461, 3'-TCACATT-5' at 4533, and 3'-TTAATTC-5' at 4542.

There is the following Inr in the core promoter, negative strand, positive direction: 3'-CTGCACC-5' at 4343.

There are two Inrs in the core promoter, positive strand, positive direction: 3'-CCACTCC-5' at 4401 and 3'-CCAGACC-5' at 4416.

===Proximal promoters===

There are eight Inrs on the negative strand in the negative direction: 3'-TCACTCT-5' at 4202, 3'-TCGGTCT-5' at 4233, 3'-CTGCACC-5' at 4238, 3'-TCGGACC-5' at 4300, 3'-CCAGTTT-5' at 4309, 3'-TCGGACC-5' at 4349, 3'-TCACACT-5' at 4361, and 3'-TTACTCC-5' at 4557.

There are seven Inrs on the positive strand in the negative direction: 3'-CCGGACT-5' at 4327, 3'-CTGCACT-5' at 4340, 3'-CCAGTTC-5' at 4417, 3'-CCACTCC-5' at 4425, 3'-CCACTTT-5' at 4461, 3'-TCACATT-5' at 4533, and 3'-TTAATTC-5' at 4542.

There is one Inr on the negative strand in the positive direction: 3'-CTGCACC-5' at 4343.

There is two Inrs on the positive strand in the positive direction: 3'-CCACTCC-5' at 4401 and 3'-CCAGACC-5' at 4416.

===Distal promoters===

Negative strand in the negative direction there are 87: 3'-TTGTTCC-5', 71, 3'-CTATACC-5', 77, 3'-CCGTTTC-5', 93, 3'-CCGTACT-5', 124, 3'-CCATATT-5', 181, 3'-CTACATT-5', 247, 3'-TTGGTCC-5', 262, 3'-TTATACT-5', 274, 3'-TCACTCT-5', 301, 3'-CTGCTTT-5', 312, 3'-CCGGTTC-5', 419, 3'-CCAGTCC-5', 441, 3'-TCGGACC-5', 459, 3'-TTGTATC-5', 468, 3'-TCACTTT-5', 473, 3'-TCGGACC-5', 508, 3'-CCGGTTC-5', 556, 3'-CCAGTCC-5', 578, 3'-TTATACC-5', 605, 3'-CCGGTCC-5', 648, 3'-CCGGTTC-5', 692, 3'-CCAGTCC-5', 714, 3'-TCGGACT-5', 732, 3'-TCGCACC-5', 741, 3'-CTACACC-5', 787, 3'-TCGGTTC-5', 874, 3'-TCGGACC-5', 899, 3'-TCGCTCT-5', 913, 3'-TCGGTCC-5', 948, 3'-CCGTACC-5', 953, 3'-TTAGTCC-5', 984, 3'-TTGGACC-5', 1015, 3'-TCACTCT-5', 1079, 3'-TCGGACC-5', 1198, 3'-TTGTACC-5', 1207, 3'-CCACTTT-5', 1212, 3'-CCGCACC-5', 1244, 3'-TTGGATC-5', 1306, 3'-TCAGACC-5', 1356, 3'-TTATTCT-5', 1365, 3'-TCGTTTT-5', 1371, 3'-TTGTTTT-5', 1394, 3'-CCACACT-5', 1479, 3'-TTGCTTC-5', 1555, 3'-CCGTTTT-5', 1561, 3'-TTACTTT-5', 1582, 3'-TTGGATT-5', 1591, 3'-TTAATTT-5', 1697, 3'-TTATACC-5', 1742, 3'-CCGCACC-5', 1897, 3'-CCGTACT-5', 1953, 3'-TTGGACC-5', 1959, 3'-TCGGACC-5', 2009, 3'-TCGTTCT-5', 2023, 3'-TTACACC-5', 2065, 3'-CCGGTCC-5', 2077, 3'-TCACATT-5', 2087, 3'-TCAAACT-5', 2141, 3'-TTGTACC-5', 2152, 3'-CCGCTTT-5', 2157, 3'-CCAGTCC-5', 2250, 3'-TCAAACT-5', 2257, 3'-TCGGACC-5', 2268, 3'-TCGTACC-5', 2277, 3'-CCACTTT-5', 2282, 3'-TTGGACC-5', 2385, 3'-TCGGACC-5', 2435, 3'-TCACTCT-5', 2449, 3'-TCGTTTT-5', 2476, 3'-TTGTTTT-5', 2490, 3'-TCATTCT-5', 2503, 3'-CCGGTCC-5', 2519, 3'-CCAGTCC-5', 2587, 3'-TCACACC-5', 2605, 3'-TTGTACC-5', 2614, 3'-CCACTTT-5', 2619, 3'-TCACACC-5', 2658, 3'-TTGGACC-5', 2720, 3'-TCGGACC-5', 2770, 3'-TCGTACT-5', 2784, 3'-TTGATTC-5', 2914, 3'-CCGATTT-5', 3009, 3'-TTGATTC-5', 3031, 3'-CCGCACC-5', 3047, 3'-TCGGACC-5', 3128, 3'-TTGTTCC-5', 3141, 3'-CCACTTT-5', 3146, 3'-TTGTATT-5', 3169, 3'-CCACACC-5', 3186, 3'-TCGGTTC-5', 3273, 3'-TCGGACC-5', 3298, 3'-TTGTTCT-5', 3307, 3'-TCGTTTT-5', 3313, 3'-TTGTTCT-5', 3340, 3'-TCGTTCT-5', 3374, 3'-CCGAACT-5', 3401, 3'-CCGTATC-5', 3446, 3'-TTGATCT-5', 3463, 3'-TTGGTCT-5', 3486, 3'-CTGTTCT-5', 3759, 3'-CTACACC-5', 3810, 3'-CTGGTCC-5', 3871, 3'-TCATTCT-5', 3893, 3'-CTACTTT-5', 3922, 3'-CCGGTCC-5', 3951, 3'-TCGGACC-5', 4037, 3'-TTGTATC-5', 4046, 3'-TCACTCT-5', 4051, 3'-TTACACT-5', 4092, 3'-CCGGTCC-5', 4102, 3'-CCGTACC-5', 4107, 3'-CCGGTCC-5', 4170, 3'-TCGAACC-5', 4188.

Positive strand in the negative direction there are 40: 3'-CTGAATT-5', 20, 3'-TTGGACC-5', 32, 3'-CTGCATT-5', 152, 3'-TTGAACC-5', 846, 3'-TCACACC-5', 882, 3'-TTGAACC-5', 1012, 3'-TCACTCC-5', 1058, 3'-TCACACC-5', 1128, 3'-TTGAACC-5', 1303, 3'-TTGCACC-5', 1339, 3'-TTGCACT-5', 1347, 3'-CCAGTCT-5', 1354, 3'-CCATTTC-5', 1380, 3'-TCGCTCT-5', 1450, 3'-CTATATC-5', 1528, 3'-TTATTTT-5', 1727, 3'-CTGCACT-5', 2000, 3'-CTACTCC-5', 2352, 3'-TTGAACC-5', 2382, 3'-TCACACC-5', 2418, 3'-CTGCACT-5', 2426, 3'-TTGAATC-5', 2708, 3'-TTGAACC-5', 2717, 3'-CTGCACC-5', 2761, 3'-TTGAACC-5', 3245, 3'-TTGCACT-5', 3289, 3'-CCAGATC-5', 3488, 3'-CTGCTCC-5', 3582, 3'-CCATTTC-5', 3688, 3'-CTGGACT-5', 3747, 3'-CTGAACC-5', 3784, 3'-CCATACC-5', 3858, 3'-TCACACC-5', 3967.

Inverse complement, negative strand, negative direction there are 32: 3'-GATACAA-5', 213, 3'-GGACCGA-5', 598, 3'-AGTGCGG-5', 664, 3'-GGACTGG-5', 734, 3'-AGTGTGG-5', 882, 3'-GAAGTGA-5', 1056, 3'-AGTGTGG-5', 1128, 3'-GGACCGG-5', 1200, 3'-AGAGCGA-5', 1448, 3'-GGTCCGA-5', 1462, 3'-GATATAG-5', 1528, 3'-AGAACGG-5', 1608, 3'-AAAATAG-5', 1730, 3'-AGTGCAG-5', 1773, 3'-GGACCGA-5', 1843, 3'-AGTGCGG-5', 1992, 3'-AGTGCGG-5', 2208, 3'-AGTGTGG-5', 2418, 3'-AGTACGG-5', 2535, 3'-AGTACGG-5', 2753, 3'-AAAGTAG-5', 2887, 3'-GATTCGA-5', 3033, 3'-GGACCGG-5', 3130, 3'-AGTGCGG-5', 3281, 3'-AGTCCGA-5', 3398, 3'-GGTCTAG-5', 3488, 3'-GGTATGG-5', 3858, 3'-GGTCCGG-5', 3873, 3'-AGTGTGG-5', 3967.

Negative strand in the positive direction there are 45: 3'-TTGTATT-5', 115, 3'-CTGTTTT-5', 147, 3'-CCACACT-5', 345, 3'-CCGGACT-5', 746, 3'-CTGCACT-5', 1372, 3'-CTGCACT-5', 1472, 3'-CCAGACT-5', 1744, 3'-CCACTTC-5', 1914, 3'-CTATTTC-5', 1978, 3'-CCAGTCC-5', 2026, 3'-TCGCTTC-5', 2095, 3'-TCATATT-5', 2178, 3'-CTGCATT-5', 2206, 3'-CCAGATC-5', 2230, 3'-TCAATCT-5', 2235, 3'-CTGTTTC-5', 2263, 3'-TCACTCT-5', 2306, 3'-CTACACC-5', 2430, 3'-CTAATTT-5', 2440, 3'-CCGCACC-5', 2566, 3'-TTATACC-5', 2590, 3'-CCACACC-5', 2602, 3'-CCACACT-5', 2636, 3'-TCAGATT-5', 2868, 3'-CTGCTCC-5', 2978, 3'-CCAGTCC-5', 2998, 3'-CCAGTCC-5', 3084, 3'-CTGGTCT-5', 3245, 3'-TCGCTCT-5', 3276, 3'-CTGGTCT-5', 3299, 3'-CTGCTCC-5', 3309, 3'-CTGCACC-5', 3322, 3'-CCGCATC-5', 3328, 3'-TTGCACT-5', 3343, 3'-CTGTTCC-5', 3352, 3'-TTGCATC-5', 3402, 3'-TCACACT-5', 3507, 3'-CCAGACC-5', 3550, 3'-CTGTTCC-5', 3625, 3'-TCACACC-5', 3824, 3'-TCATTTT-5', 4120, 3'-TCACTCT-5', 4128, 3'-TTGATTT-5', 4134, 3'-TTAGTTT-5', 4139.

Positive strand in the positive direction there are 75: 3'-CTGGACC-5', 40, 3'-CCGGTCC-5', 215, 3'-TTACACT-5', 230, 3'-CCGGACC-5', 286, 3'-CCGTTCC-5', 503, 3'-TCGGTCC-5', 515, 3'-CCGCTCT-5', 557, 3'-CCGTTCC-5', 587, 3'-CCGCTCT-5', 641, 3'-CCGTTCC-5', 671, 3'-CCGGACT-5', 725, 3'-CCGTTCC-5', 823, 3'-TCGGTCT-5', 835, 3'-TTGGACC-5', 847, 3'-CCGTTCC-5', 923, 3'-TCGGTCT-5', 935, 3'-TTGGACC-5', 947, 3'-CCGTTCC-5', 1007, 3'-TCGCTCT-5', 1061, 3'-CCGGTCC-5', 1175, 3'-CCGCTCT-5', 1229, 3'-CCGTTCC-5', 1259, 3'-CCGTTCC-5', 1327, 3'-CCGCTCT-5', 1381, 3'-CCGTTCC-5', 1427, 3'-CCGCTCT-5', 1481, 3'-TCGTTCC-5', 1511, 3'-CCGCTCT-5', 1565, 3'-CCGCACT-5', 1720, 3'-CCACACC-5', 1805, 3'-CCGCTCT-5', 1921, 3'-CCGTTCT-5', 1948, 3'-CCACACC-5', 1971, 3'-TCAATTT-5', 2136, 3'-TTGTACT-5', 2141, 3'-CTACTTT-5', 2146, 3'-CCGTTCT-5', 2190, 3'-CCAGTCT-5', 2222, 3'-TTGGTCT-5', 2228, 3'-CCGCACT-5', 2555, 3'-CCGGTCC-5', 2574, 3'-TCAGTCT-5', 2609, 3'-TCAGTTC-5', 2615, 3'-TCAGTCC-5', 2620, 3'-CTATATT-5', 2662, 3'-TCAATCC-5', 2668, 3'-TCGTTTT-5', 2707, 3'-TCGATTC-5', 2789, 3'-TTGCTCC-5', 2806, 3'-CTAAACT-5', 2871, 3'-CTGGTCC-5', 2876, 3'-CCAGACT-5', 2943, 3'-CCGGACC-5', 2988, 3'-CCAGACC-5', 3021, 3'-TTATACC-5', 3162, 3'-CTGGTTT-5', 3175, 3'-TCGGTCT-5', 3221, 3'-CTACTCC-5', 3478, 3'-CCGATCC-5', 3484, 3'-TCGATCC-5', 3522, 3'-CTGGTCT-5', 3548, 3'-TCACACT-5', 3594, 3'-CCACTCC-5', 3647, 3'-CCGGACC-5', 3679, 3'-CCGGACC-5', 3758, 3'-CTGGACC-5', 3787, 3'-TCACTCC-5', 3878, 3'-TCAGACT-5', 3924, 3'-TCACACC-5', 3966, 3'-CCACACT-5', 3971, 3'-TTACTCC-5', 4096, 3'-CTACTCC-5', 4102, 3'-CTAAATC-5', 4136, 3'-CCACTCC-5'.

Inverse complement, negative strand, positive direction there are 61: 3'-AGAGTGG-5', 53, 3'-AATGTGA-5', 230, 3'-GGAGCGA-5', 429, 3'-AGACCGG-5', 442, 3'-GGTGCGG-5', 489, 3'-AGTGCGG-5', 498, 3'-AGTGCGG-5', 582, 3'-AGTGCGG-5', 666, 3'-GGTGCAG-5', 784, 3'-AGTGCGG-5', 1086, 3'-AGTGCGG-5', 1170, 3'-AGTGCGG-5', 1254, 3'-AATGCGG-5', 1322, 3'-AATGCGG-5', 1422, 3'-AGTGCGG-5', 1590, 3'-GAAGCGG-5', 1636, 3'-GGTGCGG-5', 1764, 3'-AGTGCAG-5', 1787, 3'-GGTGTGG-5', 1805, 3'-GAACTGG-5', 1953, 3'-GGTGTGG-5', 1971, 3'-AAAGCAG-5', 2007, 3'-AGTGCAG-5', 2064, 3'-GAACCAG-5', 2227, 3'-AGATCAA-5', 2232, 3'-AGTGCAG-5', 2327, 3'-GGTGCAA-5', 2335, 3'-GAAATAG-5', 2626, 3'-GATATAA-5', 2662, 3'-GGACTGA-5', 2674, 3'-AGAGCAA-5', 2705, 3'-AAAGTGG-5', 2711, 3'-GGTGCAA-5', 2801, 3'-AGAATGA-5', 2841, 3'-GATTTGA-5', 2871, 3'-GGTCTGA-5', 2943, 3'-GGTCTGG-5', 3021, 3'-AATATGG-5', 3162, 3'-GAAATGG-5', 3168, 3'-GGACCAA-5', 3174, 3'-GGAATGA-5', 3441, 3'-GATGCAG-5', 3460, 3'-AGTGCAG-5', 3465, 3'-GGACCAG-5', 3547, 3'-GGAATGA-5', 3567, 3'-AGTGTGA-5', 3594, 3'-GAAGCGG-5', 3670, 3'-AATCCGA-5', 3799, 3'-AGAATGA-5', 3835, 3'-GAACCAG-5', 3840, 3'-AGAGTGA-5', 3876, 3'-AGTCTGA-5', 3924, 3'-AGTGTGG-5', 3966, 3'-GGTGTGA-5', 3971, 3'-AGAGTGG-5', 4040, 3'-AGAACAG-5', 4069, 3'-GAAATGA-5', 4094, 3'-GATTTAG-5', 4136.

Inverse complement, positive strand, negative direction there are 100: 3'-AGACTGA-5', 17, 3'-GGACCAG-5', 34, 3'-AAAACAA-5', 69, 3'-GATATGG-5', 77, 3'-AAACTGA-5', 130, 3'-AAAACAG-5', 167, 3'-GGTATAA-5', 181, 3'-GAAACAA-5', 229, 3'-GATGTAA-5', 247, 3'-AGTTCAA-5', 255, 3'-AAACCAG-5', 261, 3'-AATATGA-5', 274, 3'-AGAACAG-5', 288, 3'-AAACTGA-5', 307, 3'-GGTGCGG-5', 380, 3'-AGTGCGA-5', 448, 3'-AATACGA-5', 492, 3'-AAATTAG-5', 499, 3'-AGATTGA-5', 585, 3'-AATATGG-5', 605, 3'-AATACAA-5', 635, 3'-AAATTGG-5', 643, 3'-AGTTCGA-5', 721, 3'-AGACCAG-5', 727, 3'-AATACAA-5', 769, 3'-AAATTAG-5', 777, 3'-GATGTGG-5', 787, 3'-AGAGCGA-5', 911, 3'-GATCCAG-5', 975, 3'-AGATTGG-5', 1045, 3'-AGAGTGA-5', 1077, 3'-AAATTAG-5', 1234, 3'-AGTCTGG-5', 1356, 3'-AGAGCAA-5', 1369, 3'-AAAACAA-5', 1388, 3'-AGTGCAG-5', 1471, 3'-GGTGTGA-5', 1479, 3'-AGTGCAA-5', 1536, 3'-AGAACGA-5', 1553, 3'-AATACAG-5', 1566, 3'-GAAACAA-5', 1585, 3'-GAAATGA-5', 1663, 3'-AAAGCGG-5', 1680, 3'-GAATTAA-5', 1696, 3'-AATATGG-5', 1742, 3'-AATACAA-5', 1878, 3'-AAATTAG-5', 1887, 3'-AGACTGA-5', 1935, 3'-AGAATGG-5', 1948, 3'-AGAGCAA-5', 2021, 3'-AATGTGG-5', 2065, 3'-GGTGCAG-5', 2082, 3'-AGTGTAA-5', 2087, 3'-AGTTTGA-5', 2141, 3'-AGACCAA-5', 2147, 3'-GATACAA-5', 2180, 3'-AAAATGA-5', 2187, 3'-GGTGCGG-5', 2197, 3'-AGTTTGA-5', 2257, 3'-AGACCAG-5', 2263, 3'-AATACAA-5', 2305, 3'-AAACTAG-5', 2313, 3'-AGAGTGA-5', 2447, 3'-GATTCGG-5', 2454, 3'-AAAGCAA-5', 2474, 3'-AAAGCAA-5', 2480, 3'-AAAACAA-5', 2509, 3'-AGACCAG-5', 2600, 3'-AGTGTGG-5', 2605, 3'-AAATCAG-5', 2649, 3'-AGTGTGG-5', 2658, 3'-AAAACAA-5', 2842, 3'-AGAATGG-5', 3004, 3'-AAAATAA-5', 3013, 3'-AAACTAA-5', 3030, 3'-AGACCAG-5', 3123, 3'-AAATTAG-5', 3176, 3'-GGTGTGG-5', 3186, 3'-AGAGCAA-5', 3311, 3'-AAAACAA-5', 3330, 3'-AAATTGA-5', 3358, 3'-GAAGTGA-5', 3410, 3'-GAACTAG-5', 3462, 3'-AAACCAG-5', 3485, 3'-AATCCAG-5', 3681, 3'-GGAACAG-5', 3725, 3'-GGACTGG-5', 3749, 3'-AATGCAG-5', 3772, 3'-GATGTGG-5', 3810, 3'-GGACCAG-5', 3870, 3'-GGAGTAA-5', 3891, 3'-AGTTCAA-5', 4026, 3'-AGACCAG-5', 4032, 3'-AAAATAA-5', 4071, 3'-AATGTGA-5', 4092, 3'-AGTTCAA-5', 4177.

Inverse complement, positive strand, positive direction there are 75: 3'-GGTCCGA-5', 10, 3'-AGTCCGG-5', 92, 3'-AATCCAG-5', 152, 3'-GGTCCAG-5', 217, 3'-GGTGTGA-5', 345, 3'-GAAGCGG-5', 459, 3'-AGAATGA-5', 524, 3'-GAAGCGG-5', 595, 3'-GATGCGA-5', 652, 3'-GGTGCGA-5', 777, 3'-GGACCGG-5', 849, 3'-GGACCGG-5', 949, 3'-GGTCCGA-5', 1177, 3'-AAAGCAG-5', 1183, 3'-GAAGCGG-5', 1308, 3'-GAAGCGG-5', 1408, 3'-AATTCGG-5', 1541, 3'-GATGCGA-5', 1576, 3'-GGACTGG-5', 1662, 3'-GGTCTGA-5', 1744, 3'-GGACCGA-5', 1817, 3'-GGTCCGG-5', 1857, 3'-AGAATGG-5', 1888, 3'-GAAGTAG-5', 2110, 3'-AGTATAA-5', 2178, 3'-GGACTGG-5', 2213, 3'-GGTCTAG-5', 2230, 3'-AGAGTGG-5', 2247, 3'-AAAGTGA-5', 2304, 3'-GGTCCGA-5', 2318, 3'-AATCCGA-5', 2368, 3'-GATGTGG-5', 2430, 3'-GGACCGA-5', 2435, 3'-AGAGTGG-5', 2470, 3'-GGTACAA-5', 2475, 3'-GGACCGG-5', 2571, 3'-AATATGG-5', 2590, 3'-GGTGTGG-5', 2602, 3'-AGTTCAG-5', 2617, 3'-GGTGTGA-5', 2636, 3'-AGTCTAA-5', 2868, 3'-AAACTGG-5', 2873, 3'-GGTCCGG-5', 2878, 3'-AGACCGA-5', 2885, 3'-GGAGTAA-5', 2902, 3'-AGACTGA-5', 2945, 3'-AGACCGG-5', 2985, 3'-GGACCGG-5', 2990, 3'-GGAACAG-5', 3003, 3'-GGTCCAG-5', 3018, 3'-AGACCAA-5', 3023, 3'-AGTCCGG-5', 3036, 3'-GGACCAA-5', 3049, 3'-GAAGTAG-5', 3250, 3'-AGTGCAG-5', 3255, 3'-GGACCAG-5', 3298, 3'-AGAGTGA-5', 3317, 3'-GGTACAA-5', 3337, 3'-GGAACGG-5', 3375, 3'-AGTGTGA-5', 3507, 3'-GATCCGA-5', 3524, 3'-GGTCTGG-5', 3550, 3'-AGAGTGG-5', 3612, 3'-GGACCGG-5', 3681, 3'-AGTGTGG-5', 3824, 3'-GAACTGG-5', 4018, 3'-AAAATAG-5', 4123, 3'-GAACTAA-5', 4133, 3'-AAATCAA-5', 4138.

==Initiator elements (BBCABW)==
{{main|Initiator element gene transcriptions}}

===Core promoters===

There are five Inrs, positive strand, negative direction: 3'-TCCACT-5', 4423, 3'-CCCAGA-5', 4448, 3'-TCCACT-5', 4459, 3'-CCCACT-5', 4485, 3'-TTCACA-5', 4531.

There are five Inrs, negative strand, positive direction: 3'-GTCAGT-5', 4271, 3'-CTCATT-5', 4309, 3'-TGCAGA-5', 4317, 3'-CCCAGA-5', 4330, 3'-CTCACT-5', 4338.

There are four Inrs, positive strand, positive direction: 3'-TCCAGT-5', 4269, 3'-CTCACT-5', 4350, 3'-CCCACT-5', 4399, 3'-CCCAGA-5', 4414.

===Proximal promoters===

There are five Inrs on the negative strand in the negative direction: 3'-GTCACT-5', 4200, 3'-TCCAGT-5', 4307, 3'-GTCACT-5', 4319, 3'-CCCACT-5', 4353, 3'-GTCACA-5', 4359.

There are nine Inrs on the positive strand in the negative direction: 3'-GCCAGA-5', 4233, 3'-TGCAGT-5', 4317, 3'-TGCACT-5', 4340, 3'-GCCAGT-5', 4415, 3'-TCCACT-5', 4423, 3'-CCCAGA-5', 4448, 3'-TCCACT-5', 4459, 3'-CCCACT-5', 4485, 3'-TTCACA-5', 4531.

There is six Inrs on the negative strand in the positive direction: 3'-CTCAGA-5', 4195, 3'-GTCAGT-5', 4271, 3'-CTCATT-5', 4309, 3'-TGCAGA-5', 4317, 3'-CCCAGA-5', 4330, 3'-CTCACT-5', 4338.

There is four Inrs on the positive strand in the positive direction: 3'-TCCAGT-5', 4269, 3'-CTCACT-5', 4350, 3'-CCCACT-5', 4399, 3'-CCCAGA-5', 4414.

===Distal promoters===

Negative strand in the negative direction there are 44: 3'-TCCATA-5', 179, 3'-CCCAGT-5', 206, 3'-CTCAGA-5', 278, 3'-GTCACT-5', 299, 3'-TTCACA-5', 322, 3'-TCCAGT-5', 439, 3'-TGCATT-5', 533, 3'-TCCAGT-5', 568, 3'-TCCAGT-5', 576, 3'-TCCAGT-5', 712, 3'-GGCAGA-5', 754, 3'-GCCACT-5', 868, 3'-GTCACT-5', 1034, 3'-CCCACT-5', 1049, 3'-CTCACT-5', 1077, 3'-GGCACA-5', 1220, 3'-GTCACT-5', 1325, 3'-GTCAGA-5', 1354, 3'-CTCAGA-5', 1444, 3'-GGCAGT-5', 1511, 3'-TGCAGA-5', 1774, 3'-GTCACT-5', 1978, 3'-GTCACA-5', 2085, 3'-TCCAGT-5', 2248, 3'-GTCACT-5', 2404, 3'-CTCACT-5', 2447, 3'-TCCAGT-5', 2585, 3'-GTCACA-5', 2603, 3'-GTCACA-5', 2656, 3'-GTCACT-5', 2739, 3'-TTCACA-5', 2860, 3'-TCCACT-5', 3144, 3'-CCCACA-5', 3184, 3'-TTCACT-5', 3410, 3'-GTCATT-5', 3480, 3'-TCCACT-5', 3825, 3'-CTCATA-5', 3829, 3'-CTCATT-5', 3891, 3'-TTCACA-5', 3939.

Positive strand in the negative direction there are 59: 3'-GCCATA-5', 39, 3'-TGCATT-5', 152, 3'-GTCACT-5', 208, 3'-GGCACA-5', 266, 3'-GGCACA-5', 518, 3'-GGCACA-5', 960, 3'-GGCAGA-5', 1023, 3'-TGCAGT-5', 1032, 3'-TTCACT-5', 1056, 3'-GGCACA-5', 1116, 3'-CTCACA-5', 1126, 3'-GGCAGA-5', 1314, 3'-TGCAGT-5', 1323, 3'-TGCACT-5', 1347, 3'-TCCAGT-5', 1352, 3'-TCCATT-5', 1378, 3'-CCCAGA-5', 1411, 3'-TGCAGT-5', 1472, 3'-CTCACT-5', 1491, 3'-CCCAGA-5', 1518, 3'-TCCAGT-5', 1532, 3'-TGCACA-5', 1719, 3'-GGCAGA-5', 1967, 3'-TGCAGT-5', 1976, 3'-GCCACT-5', 1995, 3'-TGCACT-5', 2000, 3'-TGCAGT-5', 2083, 3'-GCCAGT-5', 2211, 3'-TGCAGT-5', 2402, 3'-TGCACT-5', 2426, 3'-TCCACT-5', 2632, 3'-GCCAGT-5', 2654, 3'-GGCACA-5', 2665, 3'-TGCAGT-5', 2737, 3'-GCCACT-5', 2756, 3'-GCCATT-5', 3284, 3'-TGCACT-5', 3289, 3'-TGCAGA-5', 3431, 3'-GGCATA-5', 3445, 3'-GGCATA-5', 3451, 3'-GGCAGT-5', 3478, 3'-GGCAGA-5', 3589, 3'-GGCAGT-5', 3600, 3'-GTCAGA-5', 3625, 3'-GGCACA-5', 3632, 3'-CTCAGA-5', 3644, 3'-GCCATT-5', 3686, 3'-TCCACA-5', 3692, 3'-CCCATA-5', 3856, 3'-CTCACA-5', 3965.

Inverse complement, negative strand, negative direction there are 46: 3'-TCTGAC-5', 16, 3'-TGTGGA-5', 62, 3'-TGTGCA-5', 342, 3'-TGTGCA-5', 531, 3'-AGTGCG-5', 663, 3'-TGTGGG-5', 749, 3'-TCTGAG-5', 916, 3'-TGTGCG-5', 963, 3'-ACTGAA-5', 1052, 3'-AGTGAG-5', 1057, 3'-TCTGAG-5', 1082, 3'-TGTGGA-5', 1129, 3'-AGTGGA-5', 1171, 3'-AATGAA-5', 1298, 3'-TCTGAG-5', 1403, 3'-AGTGAC-5', 1492, 3'-TGTGAA-5', 1544, 3'-TCTGAA-5', 1617, 3'-AGTGCA-5', 1772, 3'-TCTGAC-5', 1934, 3'-AGTGCG-5', 1991, 3'-TCTGAG-5', 2026, 3'-TATGAC-5', 2162, 3'-ACTGGC-5', 2190, 3'-AGTGCG-5', 2207, 3'-TGTGAA-5', 2551, 3'-AGTGAA-5', 2578, 3'-ACTGAG-5', 2787, 3'-TATGGA-5', 2994, 3'-AGTGGG-5', 3057, 3'-AGTGAA-5', 3101, 3'-AGTGAA-5', 3240, 3'-AGTGCG-5', 3280, 3'-TCTGAC-5', 3425, 3'-TATGAC-5', 3541, 3'-TATGCG-5', 3547, 3'-TATGGA-5', 3859, 3'-TGTGGA-5', 3968, 3'-TGTGAA-5', 3983.

Inverse complement, positive strand, negative direction there are 54, 3'-ACTGAA-5', 18, 3'-TATGGG-5', 78, 3'-ACTGAA-5', 131, 3'-TATGAG-5', 275, 3'-AGTGAG-5', 300, 3'-ACTGAC-5', 308, 3'-AGTGCG-5', 447, 3'-AGTGAA-5', 472, 3'-AGTGGA-5', 523, 3'-AGTGAG-5', 1035, 3'-AGTGAG-5', 1078, 3'-AGTGGC-5', 1121, 3'-AGTGAG-5', 1326, 3'-TCTGGG-5', 1357, 3'-AGTGCA-5', 1470, 3'-ACTGCA-5', 1494, 3'-AGTGCA-5', 1535, 3'-AATGAA-5', 1581, 3'-AATGCC-5', 1634, 3'-TATGGC-5', 1743, 3'-ACTGAG-5', 1936, 3'-AATGGC-5', 1949, 3'-AGTGAG-5', 1979, 3'-ACTGCA-5', 1998, 3'-TGTGGC-5', 2066, 3'-AATGAC-5', 2188, 3'-AGTGAG-5', 2405, 3'-ACTGCA-5', 2424, 3'-AGTGAG-5', 2448, 3'-TGTGGC-5', 2606, 3'-AGTGAG-5', 2740, 3'-ACTGCA-5', 2759, 3'-TGTGCA-5', 2863, 3'-AATGGC-5', 3005, 3'-TGTGAG-5', 3268, 3'-AGTGAC-5', 3411, 3'-TGTGCA-5', 3429, 3'-TGTGCC-5', 3561, 3'-AATGGG-5', 3660, 3'-TGTGGG-5', 3712, 3'-ACTGGG-5', 3750, 3'-AATGCA-5', 3771, 3'-TCTGGA-5', 3836, 3'-ACTGCC-5', 3852, 3'-TGTGGC-5', 3960, 3'-AGTGAG-5', 4050, 3'-TGTGAG-5', 4093.

Negative strand in the positive direction there 87: 3'-TCCAGA-5', 15, 3'-GGCATT-5', 22, 3'-GTCACA-5', 155, 3'-CCCAGA-5', 204, 3'-GCCACA-5', 343, 3'-CGCAGA-5', 396, 3'-TGCAGA-5', 438, 3'-CCCAGA-5', 468, 3'-TGCACA-5', 548, 3'-TCCACA-5', 632, 3'-CGCACT-5', 686, 3'-CGCACA-5', 800, 3'-GCCAGA-5', 835, 3'-GCCACA-5', 884, 3'-GCCAGA-5', 935, 3'-GCCACA-5', 984, 3'-CGCACA-5', 1052, 3'-CGCACA-5', 1136, 3'-TGCACA-5', 1220, 3'-CCCAGT-5', 1250, 3'-CGCAGA-5', 1316, 3'-TGCACT-5', 1372, 3'-CGCAGA-5', 1416, 3'-TGCACT-5', 1472, 3'-CCCACT-5', 1502, 3'-CGCACA-5', 1556, 3'-GGCATT-5', 1702, 3'-CCCAGA-5', 1742, 3'-TGCACA-5', 1822, 3'-TCCACT-5', 1912, 3'-TGCAGA-5', 1937, 3'-GGCACT-5', 1996, 3'-CCCAGT-5', 2024, 3'-TCCACA-5', 2029, 3'-CTCAGT-5', 2060, 3'-TGCAGT-5', 2065, 3'-GCCACT-5', 2072, 3'-TTCAGT-5', 2098, 3'-CTCATA-5', 2176, 3'-TGCATT-5', 2206, 3'-GTCAGA-5', 2222, 3'-CTCAGA-5', 2239, 3'-TTCACT-5', 2304, 3'-TGCAGT-5', 2328, 3'-GTCACT-5', 2425, 3'-GTCAGA-5', 2609, 3'-CTCAGA-5', 2699, 3'-TGCAGA-5', 2721, 3'-CTCAGA-5', 2729, 3'-TGCAGA-5', 2859, 3'-CTCAGA-5', 2866, 3'-CTCATT-5', 2902, 3'-GTCACT-5', 2929, 3'-TTCAGT-5', 2936, 3'-TGCACA-5', 2962, 3'-TGCATT-5', 3072, 3'-CCCAGT-5', 3082, 3'-CCCAGA-5', 3091, 3'-TCCACA-5', 3192, 3'-CTCACA-5', 3209, 3'-GCCAGA-5', 3221, 3'-TGCAGT-5', 3232, 3'-TGCAGT-5', 3281, 3'-CTCACT-5', 3317, 3'-TGCACT-5', 3343, 3'-CCCAGT-5', 3379, 3'-CCCACT-5', 3388, 3'-GGCACA-5', 3409, 3'-TGCAGT-5', 3461, 3'-GGCAGA-5', 3473, 3'-CTCACA-5', 3505, 3'-GCCACA-5', 3705, 3'-TCCAGA-5', 3806, 3'-GTCACA-5', 3822, 3'-TGCAGA-5', 3831, 3'-TCCAGA-5', 3891, 3'-CGCAGA-5', 3916, 3'-GTCACA-5', 3954, 3'-TGCAGT-5', 3962, 3'-GGCACT-5', 4006, 3'-TCCACT-5', 4013.

Positive strand in the positive direction there are 40: 3'-TCCAGT-5', 153, 3'-CGCACA-5', 1020, 3'-CCCAGA-5', 1711, 3'-CGCACT-5', 1720, 3'-CCCACA-5', 1803, 3'-CCCAGA-5', 1958, 3'-TCCACA-5', 1969, 3'-GTCAGT-5', 2100, 3'-TCCACT-5', 2128, 3'-TCCAGT-5', 2220, 3'-TCCAGA-5', 2258, 3'-TCCACT-5', 2375, 3'-CGCAGT-5', 2423, 3'-GTCACA-5', 2464, 3'-CCCAGA-5', 2489, 3'-TTCACT-5', 2511, 3'-CGCACT-5', 2555, 3'-GTCAGT-5', 2607, 3'-CTCAGT-5', 2613, 3'-TTCAGT-5', 2618, 3'-TCCATA-5', 2642, 3'-TCCAGA-5', 3019, 3'-CTCAGA-5', 3187, 3'-TGCAGA-5', 3256, 3'-CTCACA-5', 3592, 3'-GCCAGA-5', 3608, 3'-CTCACT-5', 3712, 3'-TCCATT-5', 3731, 3'-TCCAGA-5', 3771, 3'-CCCAGT-5', 3820, 3'-GTCACT-5', 3843, 3'-CTCACT-5', 3876, 3'-TTCAGA-5', 3922, 3'-TCCACT-5', 3934, 3'-GTCACA-5', 3964, 3'-CGCAGA-5', 4056.

Inverse complement, negative strand, positive direction there are 94: 3'-AGTGGG-5', 54, 3'-TCTGCA-5', 224, 3'-TGTGAA-5', 231, 3'-ACTGCC-5', 238, 3'-TCTGAG-5', 256, 3'-TCTGGA-5', 271, 3'-ACTGGG-5', 348, 3'-AGTGCG-5', 497, 3'-AGTGCG-5', 581, 3'-AGTGCG-5', 665, 3'-ACTGCG-5', 749, 3'-TGTGGC-5', 819, 3'-ACTGCC-5', 901, 3'-TGTGGC-5', 919, 3'-ACTGCG-5', 1001, 3'-TGTGGC-5', 1023, 3'-AGTGCG-5', 1085, 3'-AGTGCG-5', 1160, 3'-AGTGCG-5', 1169, 3'-AGTGCG-5', 1253, 3'-ACTGAG-5', 1287, 3'-AATGCG-5', 1321, 3'-TCTGGC-5', 1377, 3'-TCTGCG-5', 1396, 3'-AATGCG-5', 1421, 3'-TCTGGC-5', 1477, 3'-TCTGCG-5', 1496, 3'-ACTGCA-5', 1505, 3'-AGTGCG-5', 1589, 3'-AGTGCG-5', 1725, 3'-AGTGCA-5', 1786, 3'-TGTGGA-5', 1806, 3'-TCTGGG-5', 1865, 3'-ACTGGG-5', 1954, 3'-TGTGGC-5', 1972, 3'-TCTGGC-5', 1993, 3'-AGTGCA-5', 2063, 3'-AGTGGC-5', 2068, 3'-TATGGC-5', 2160, 3'-ACTGCA-5', 2204, 3'-AGTGCA-5', 2326, 3'-TGTGCA-5', 2681, 3'-AGTGGA-5', 2712, 3'-ACTGCC-5', 2823, 3'-AATGAC-5', 2842, 3'-TCTGCA-5', 2857, 3'-TCTGGC-5', 2884, 3'-AATGGG-5', 2911, 3'-TCTGAC-5', 2944, 3'-TCTGAG-5', 2951, 3'-TGTGCA-5', 2960, 3'-TCTGGC-5', 2984, 3'-TCTGAG-5', 3007, 3'-AGTGCC-5', 3011, 3'-TATGAC-5', 3028, 3'-TCTGCA-5', 3061, 3'-AATGCA-5', 3070, 3'-ACTGGC-5', 3118, 3'-TCTGAG-5', 3124, 3'-TATGGA-5', 3163, 3'-AATGGG-5', 3169, 3'-AGTGCC-5', 3235, 3'-TATGAG-5', 3261, 3'-TCTGCA-5', 3268, 3'-TCTGCA-5', 3279, 3'-ACTGCA-5', 3320, 3'-ACTGGC-5', 3346, 3'-TCTGCC-5', 3359, 3'-TCTGGC-5', 3406, 3'-AATGCC-5', 3431, 3'-TGTGGA-5', 3437, 3'-AATGAA-5', 3442, 3'-AATGAG-5', 3446, 3'-AGTGGG-5', 3450, 3'-AGTGCA-5', 3464, 3'-AATGAC-5', 3568, 3'-TGTGAA-5', 3595, 3'-AGTGAC-5', 3713, 3'-ACTGAG-5', 3736, 3'-AATGAC-5', 3783, 3'-AATGAA-5', 3836, 3'-AGTGAG-5', 3877, 3'-TGTGAG-5', 3904, 3'-TCTGAA-5', 3925, 3'-TGTGCA-5', 3960, 3'-TGTGAC-5', 3972, 3'-AGTGGG-5', 4041, 3'-ACTGAA-5', 4090, 3'-AATGAG-5', 4095.

Inverse complement, positive strand, positive direction there are 47: 3'-TCTGAC-5', 236, 3'-TGTGAC-5', 346, 3'-TCTGCC-5', 399, 3'-TCTGGC-5', 441, 3'-AATGAA-5', 525, 3'-TGTGCA-5', 569, 3'-TGTGCG-5', 803, 3'-TGTGCG-5', 887, 3'-TGTGCG-5', 987, 3'-TGTGAC-5', 1139, 3'-TGTGCC-5', 1223, 3'-TGTGCC-5', 1559, 3'-ACTGGG-5', 1663, 3'-TGTGCC-5', 1698, 3'-TCTGAA-5', 1745, 3'-AATGGG-5', 1889, 3'-ACTGGC-5', 2214, 3'-AGTGGA-5', 2248, 3'-AGTGAG-5', 2305, 3'-AGTGGG-5', 2313, 3'-AGTGAC-5', 2341, 3'-TCTGAA-5', 2417, 3'-TGTGGA-5', 2431, 3'-TATGAA-5', 2740, 3'-TCTGGA-5', 2862, 3'-AGTGAC-5', 2930, 3'-ACTGAA-5', 2946, 3'-TGTGGG-5', 2965, 3'-ACTGAA-5', 3030, 3'-AGTGCA-5', 3254, 3'-AGTGAC-5', 3318, 3'-TGTGAG-5', 3508, 3'-TGTGGG-5', 3533, 3'-TCTGGA-5', 3551, 3'-AGTGGG-5', 3613, 3'-AGTGCC-5', 3748, 3'-ACTGGA-5', 3785, 3'-ACTGGA-5', 4019, 3'-AGTGAC-5', 4088, 3'-AGTGAG-5', 4127.

==L boxes==
{{main|L box gene transcriptions}}

==M35 boxes==
{{main|M35 box gene transcriptions}}
negative strand in the negative direction (from ZSCAN22 to A1BG) is SuccessablesM35--.bas, looking for 3'-TTGACA-5', 2, 3'-TTGACA-5', 477, 3'-TTGACA-5', 4399.

==M boxes==
{{main|M box gene transcriptions}}

==Metal responsive elements==
{{main|Metal responsive element gene transcriptions}}

===Proximal promoters===

On the positive strand in the negative direction there is an MRE 3'-TGCACTC-5' at 4341.

===Distal promoters===

Positive strand in the negative direction there are 6: 3'-TGCGCTC-5', 891, 3'-TGCACTC-5', 1348, 3'-TGCACTC-5', 2001, 3'-TGCACTC-5', 2427, 3'-TGCACCC-5', 2762, 3'-TGCACTC-5', 3290.

Inverse complement, negative strand, negative direction there are 2: 3'-GTGTGCA-5', 531, 3'-GAGTGCA-5', 1772.

Inverse complement, positive strand, negative direction there are 2: 3'-GAGTGCA-5', 1470, 3'-GTGTGCA-5', 2863.

Negative strand in the positive direction there are 11: 3'-TGCGCCC-5', 453, 3'-TGCACAC-5', 549, 3'-TGCACAC-5', 1221, 3'-TGCGCCC-5', 1247, 3'-TGCACTC-5', 1373, 3'-TGCGCCC-5', 1399, 3'-TGCACTC-5', 1473, 3'-TGCGCCC-5', 1499, 3'-TGCGCCC-5', 1657, 3'-TGCACAC-5', 2963, 3'-TGCACCC-5', 3323.

Positive strand in the positive direction there are 2: 3'-TGCGCCC-5', 872, 3'-TGCGCCC-5', 972.

Inverse complement, negative strand, positive direction there are 10: 3'-GCGTGCA-5', 546, 3'-GCGCGCA-5', 684, 3'-GGGCGCA-5', 876, 3'-GGGCGCA-5', 976, 3'-GCGTGCA-5', 1218, 3'-GTGCGCA-5', 1523, 3'-GAGTGCA-5', 1786, 3'-GAGTGCA-5', 2326, 3'-GGGTGCA-5', 2800, 3'-GGGTGCA-5', 3883.

==Motif ten elements==
{{main|Motif ten element gene transcriptions}}
There are no MTEs in either promoter.

==MYB recognition elements==
{{main|MYB recognition element gene transcriptions}}

==P boxes==
{{main|P box gene transcriptions}}

==Pribnow boxes==
{{main|Pribnow box gene transcriptions}}
# negative strand in the negative direction, looking for 3'-TATAAT-5', 2, 3'-TATAAT-5', 3454, 3'-TATAAT-5', 3468,
# negative strand in the positive direction, looking for 3'-TATAAT-5', 1, 3'-TATAAT-5', 729,
# positive strand in the negative direction, looking for 3'-TATAAT-5', 0,
# positive strand in the positive direction, looking for 3'-TATAAT-5', 0,
# complement, negative strand, negative direction, looking for 3'-ATATTA-5', 0,
# complement, negative strand, positive direction, looking for 3'-ATATTA-5', 0,
# complement, positive strand, negative direction, looking for 3'-ATATTA-5', 2, 3'-ATATTA-5', 3454, 3'-ATATTA-5', 3468,
# complement, positive strand, positive direction, looking for 3'-ATATTA-5', 1, 3'-ATATTA-5', 729,
# inverse complement, negative strand, negative direction, looking for 3'-ATTATA-5', 2, 3'-ATTATA-5', 272, 3'-ATTATA-5', 603,
# inverse complement, negative strand, positive direction, looking for 3'-ATTATA-5', 1, 3'-ATTATA-5', 727,
# inverse complement, positive strand, negative direction, looking for 3'-ATTATA-5', 0,
# inverse complement, positive strand, positive direction, looking for 3'-ATTATA-5', 0,
# inverse, negative strand, negative direction, looking for 3'-TAATAT-5', 0,
# inverse, negative strand, positive direction, looking for 3'-TAATAT-5', 0,
# inverse, positive strand, negative direction, looking for 3'-TAATAT-5', 2, 3'-TAATAT-5', 272, 3'-TAATAT-5', 603,
# inverse, positive strand, positive direction, looking for 3'-TAATAT-5', 1, 3'-TAATAT-5', 727.

==Prolamin boxes==
{{main|Prolamin box gene transcriptions}}
# negative strand in the negative direction: 1, 3'-TGTAAAG-5', 2884,
# negative strand in the positive direction: 1, 3'-TGAAAAG-5', 489,
# positive strand in the negative direction: 1, 3'-TGAAAAG-5', 1627.

==Pyrimidine boxes==
{{main|Pyrimidine box gene transcriptions}}
Pyrimidine boxes and their complements in the negative direction: 3'-CCTTTT-5' at 2459, 3'-CCTTTT-5' at 2927, and 3'-CCTTTT-5' at 2968 occur. Inverse pyrimidine boxes and their complements occur 3'-AAAAGG-5' at 105, 3'-AAAAGG-5' at 1107, 3'-AAAAGG-5' at 3345, and 3'-AAAAGG-5' at 3441.

Pyrimidine boxes in the positive direction: 3'-CCTTTT-5' at 135 and 3'-CCTTTT-5' at 291 and their complements are close to ZNF497.

==Retinoblastoma control elements==
{{main|TC element gene transcriptions}}

==R response elements==
{{main|MYB recognition element gene transcriptions}}

==STAT5s==
{{main|STAT gene transcriptions}}

===Proximal promoters===

Negative strand in the positive direction there is 1: 3'-TTCCGGGAA-5', 4247.

===Distal promoters===

Positive strand in the negative direction there are 2: 3'-TTCGTTGAA-5', 3506, 3'-TTCCCTGAA-5', 3782.

Positive strand in the positive direction there is 1: 3'-TTCCATGAA-5', 128.

==Synaptic Activity-Responsive Elements==
{{main|Synaptic Activity-Responsive Elements}}

==TACTAAC boxes==
{{main|TACTAAC box gene transcriptions}}

==TATA boxes==
{{main|TATA box gene transcriptions}}
Negative strand in the negative direction there are 2: 3'-TATATATA-5' at 1600 (or -2860 nts upstream from the TSS) and 3'-TATATAAA-5' at 1602 (or -2858 nts).

Positive strand in the negative direction there are 3: 3'-TATAAAAG-5' at 184 (or -4276 nts), 3'-TATAAAAG-5' at 223 (or -4237 nts), and 3'-TATATAAA-5' at 2874 (or -1586 nts).

Inverse complement, negative strand, negative direction there are 2: 3'-TATATATA-5', 1600, 3'-TTTATATA-5', 2871.

Inverse complement, positive strand, negative direction there is 1: 3'-TTTTTATA-5', 219.

==TAT boxes==
{{main|TAT box gene transcriptions}}
Only an inverse and its complement occurs between ZSCAN22 and A1BG: 3'-TACCTAT-5' at 2996 nts from ZSCAN22.

==TATCCAC boxes==
{{main|TATC box gene transcriptions}}
None occur.

==T boxes==
{{main|T box gene transcriptions}}

==Telomeric repeat DNA-binding factors==

Copying the consensus telomeric repeat DNA-binding factor (TRF): 3'-TTAGGG-5' and putting the sequence in "⌘F" locates this sequence in the A1BG negative direction, nucleotide positions as can be found by the computer programs.

In the nucleotides between ZSCAN22 and A1BG there is at least one 3'-TTAGGG-5' beginning about 680 nucleotides from ZSCAN22 or ending at about 686 nts.

''Homo sapiens'' genes containing these are found using Homo sapiens "TRF (TTAGGG repeat-binding factor)".

==Tetradecanoylphorbol-13-acetate response elements==
{{main|Tetradecanoylphorbol-13-acetate response element gene transcriptions}}

==TGFβ control elements==
{{main|TC element gene transcriptions}}

==TGF-β inhibitory elements==
{{main|TC element gene transcriptions}}

==Upstream response elements==
{{main|Upstream response element gene transcriptions}}

==V boxes==
{{main|V box gene transcriptions}}

==W boxes==
{{main|W box gene transcriptions}}

===Proximal promoters===

Inverse W boxes occur in the negative strand, negative direction of A1BG: 3'-GGTCAA-5' at 4416 and 3'-GGTCAA-5' at 4308.

W boxes occur in the positive direction, positive strand of A1BG: 3'-CTGACC-5' and its complement at 4216 and inverse W boxes occur 3'-GGTCAG-5' and its complement at 4270.

===Distal promoters===

A W box occurs 3'-CTGACC-5' at 3749, whereas 3'-CTGACT-5' at 17, 3'-TTGACT-5' at 130, 3'-TTGACT-5' at 307, and 3'-CTGACC-5' at 734 occur close to ZSCAN22, but 3'-CTGACT-5' at 1935 could be associated ZSCAN22 or an unknown gene between it and A1BG, along with their complements, negative strand, negative direction.

Inverse complement, positive strand, negative direction there are 5: 3'-GGTCAG-5', 440, 3'-GGTCAG-5', 577, 3'-GGTCAG-5', 713, 3'-GGTCAG-5', 2249, 3'-GGTCAG-5', 2586.

W box inverses occur 3'-GGTCAG-5' at 1353 negative direction.

W boxes 3'-AGTCAG-5' at 2101, 3'-GGTCAG-5' at 2221, 3'-AGTCAG-5' at 2608, 3'-AGTCAA-5' at 2614, and 3'-AGTCAG-5' at 2619 along with their complements, positive direction.

W boxes in the positive direction occur 3'-CTGACC-5' at 1662, 3'-CTGACC-5' at 2213, 3'-TTGACC-5' at 2873, 3'-CTGACT-5' at 2945, and 3'-TTGACC-5' at 4018 that could be associated with A1BG, along with 3'-TTGACC-5' at 1953, 3'-CTGACT-5' at 2674, and 3'-TTGACT-5' at 3735.

Inverse complement, positive strand, positive direction there are 6: 3'-GGTCAG-5', 2025, 3'-AGTCAG-5', 2099, 3'-GGTCAG-5', 2606, 3'-GGTCAG-5', 2997, 3'-GGTCAG-5', 3083, 3'-GGTCAA-5', 3380.

==X boxes==
{{main|X box gene transcriptions}}
There are no X boxes in either promoter.

==X core promoter elements==
{{main|X core promoter element gene transcriptions}}
# negative strand in the negative direction, looking for 3'-G/A/T-G/C-G-T/C-G-G-G/A-A-G/C-A/C-5', 1, 3'-TGGTGGGACC-5', 3744,
# negative strand in the positive direction, looking for 3'-G/A/T-G/C-G-T/C-G-G-G/A-A-G/C-A/C-5', 0,
# positive strand in the negative direction, looking for 3'-G/A/T-G/C-G-T/C-G-G-G/A-A-G/C-A/C-5', 0,
# positive strand in the positive direction, looking for 3'-G/A/T-G/C-G-T/C-G-G-G/A-A-G/C-A/C-5', 0,
# complement, negative strand, negative direction, looking for 3'-C/A/T-G/C-C-A/G-C-C-C/T-T-G/C-G/T-5', 0,
# complement, negative strand, positive direction, looking for 3'-C/A/T-G/C-C-A/G-C-C-C/T-T-G/C-G/T-5', 0,
# complement, positive strand, negative direction, looking for 3'-C/A/T-G/C-C-A/G-C-C-C/T-T-G/C-G/T-5', 1, 3'-ACCACCCTGG-5', 3744,
# complement, positive strand, positive direction, looking for 3'-C/A/T-G/C-C-A/G-C-C-C/T-T-G/C-G/T-5', 0,
# inverse complement, negative strand, negative, looking for 3'-G/T-G/C-T-C/T-C-C-A/G-C-G/C-C/A/T-5', 0,
# inverse complement, negative strand, positive direction, looking for 3'-G/T-G/C-T-C/T-C-C-A/G-C-G/C-C/A/T-5', 0,
# inverse complement, positive strand, negative direction, looking for 3'-G/T-G/C-T-C/T-C-C-A/G-C-G/C-C/A/T-5', 1, 3'-GCTCCCACCT-5', 392,
# inverse complement, positive strand, positive direction, looking for 3'-G/T-G/C-T-C/T-C-C-A/G-C-G/C-C/A/T-5', 0,
# inverse, negative strand, negative direction, looking for 3'-A/C-G/C-A-G/A-G-G-T/C-G-G/C-G/A/T-5', 1, 3'-CGAGGGTGGA-5', 392,
# inverse, negative strand, positive direction, looking for 3'-A/C-G/C-A-G/A-G-G-T/C-G-G/C-G/A/T-5', 1, 3'-CCAGGGTGGG-5', 102,
# inverse, positive strand, negative direction, looking for 3'-A/C-G/C-A-G/A-G-G-T/C-G-G/C-G/A/T-5', 0,
# inverse, positive strand, positive direction, looking for 3'-A/C-G/C-A-G/A-G-G-T/C-G-G/C-G/A/T-5', 0.

==Y boxes==
{{main|Y box gene transcriptions}}
There are no Y boxes in either promoter.

==Z boxes==
{{main|Z box gene transcriptions}}

==Hypotheses==
# [[Downstream core element gene transcriptions|Downstream core promoters]] may work as transcription factors even as their complements or inverses.
# In addition to the DNA binding sequences listed above, the transcription factors that can open up and attach through the local epigenome need to be known and specified.

==See also==
{{div col|colwidth=20em}}
* [[Alpha-1-B glycoprotein]]
* [[SCAN domain]]
{{Div col end}}

==References==
{{reflist|2}}

==External links==
* [http://www.genome.jp/ GenomeNet KEGG database]
* [http://www.ncbi.nlm.nih.gov/sites/entrez?db=gene Home - Gene - NCBI]
* [http://www.ncbi.nlm.nih.gov/sites/gquery NCBI All Databases Search]
* [http://www.ncbi.nlm.nih.gov/ncbisearch/ NCBI Site Search]

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[[Category:Resources last modified in February 2020]]