RNF20: Difference between revisions

Jump to navigation Jump to search
m (Robot: Automated text replacement (-{{reflist}} +{{reflist|2}}, -<references /> +{{reflist|2}}, -{{WikiDoc Cardiology Network Infobox}} +))
 
m (Bot: HTTP→HTTPS)
 
Line 1: Line 1:
<!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
{{Infobox_gene}}
{{PBB_Controls
'''E3 ubiquitin-protein ligase BRE1A''' is an [[enzyme]] that in humans is encoded by the ''RNF20'' [[gene]].<ref name="pmid16337599">{{cite journal | vauthors = Kim J, Hake SB, Roeder RG | title = The human homolog of yeast BRE1 functions as a transcriptional coactivator through direct activator interactions | journal = Mol Cell | volume = 20 | issue = 5 | pages = 759–70 |date=Dec 2005 | pmid = 16337599 | pmc =  | doi = 10.1016/j.molcel.2005.11.012 }}</ref><ref name="pmid12876294">{{cite journal | vauthors = Wood A, Schneider J, Dover J, Johnston M, Shilatifard A | title = The Paf1 complex is essential for histone monoubiquitination by the Rad6-Bre1 complex, which signals for histone methylation by COMPASS and Dot1p | journal = J Biol Chem | volume = 278 | issue = 37 | pages = 34739–42 |date=Sep 2003 | pmid = 12876294 | pmc = | doi = 10.1074/jbc.C300269200 }}</ref><ref name="pmid18832071">{{cite journal | vauthors = Shema E, Tirosh I, Aylon Y, Huang J, Ye C, Moskovits N, Raver-Shapira N, Minsky N, Pirngruber J, Tarcic G, Hublarova P, Moyal L, Gana-Weisz M, Shiloh Y, Yarden Y, Johnsen SA, Vojtesek B, Berger SL, Oren M | title = The histone H2B-specific ubiquitin ligase RNF20/hBRE1 acts as a putative tumor suppressor through selective regulation of gene expression | journal = Genes Dev | volume = 22 | issue = 19 | pages = 2664–76 |date=Oct 2008 | pmid = 18832071 | pmc = 2559905 | doi = 10.1101/gad.1703008 }}</ref><ref name="pmid19037095">{{cite journal | vauthors = Liu Z, Oh SM, Okada M, Liu X, Cheng D, Peng J, Brat DJ, Sun SY, Zhou W, Gu W, Ye K | title = Human BRE1 is an E3 ubiquitin ligase for Ebp1 tumor suppressor | journal = Mol Biol Cell | volume = 20 | issue = 3 | pages = 757–68 |date=Feb 2009 | pmid = 19037095 | pmc = 2633391 | doi = 10.1091/mbc.E08-09-0983 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: RNF20 ring finger protein 20| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=56254| accessdate = }}</ref>
| update_page = yes
| require_manual_inspection = no
| update_protein_box = yes
| update_summary = yes
| update_citations = yes
}}
 
<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot. See Template:PBB_Controls to Stop updates. -->
{{GNF_Protein_box
| image =
| image_source =
| PDB =  
| Name = Ring finger protein 20
| HGNCid = 10062
| Symbol = RNF20
| AltSymbols =; BRE1A; FLJ11189; FLJ20382; KIAA2779; MGC129667; MGC129668
| OMIM = 607699
| ECnumber =
| Homologene = 5571
| MGIid = 1925927
  | GeneAtlas_image1 = PBB_GE_RNF20_gnf1h00327_at_tn.png
| Function = {{GNF_GO|id=GO:0005515 |text = protein binding}} {{GNF_GO|id=GO:0008270 |text = zinc ion binding}} {{GNF_GO|id=GO:0016874 |text = ligase activity}} {{GNF_GO|id=GO:0046872 |text = metal ion binding}}
| Component = {{GNF_GO|id=GO:0005634 |text = nucleus}} {{GNF_GO|id=GO:0005694 |text = chromosome}}  
| Process = {{GNF_GO|id=GO:0006512 |text = ubiquitin cycle}} {{GNF_GO|id=GO:0016568 |text = chromatin modification}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 56254
    | Hs_Ensembl = ENSG00000155827
    | Hs_RefseqProtein = NP_062538
    | Hs_RefseqmRNA = NM_019592
    | Hs_GenLoc_db =
    | Hs_GenLoc_chr = 9
    | Hs_GenLoc_start = 103335954
    | Hs_GenLoc_end = 103365447
    | Hs_Uniprot = Q5VTR2
    | Mm_EntrezGene = 109331
    | Mm_Ensembl = ENSMUSG00000028309
    | Mm_RefseqmRNA = NM_182999
    | Mm_RefseqProtein = NP_892044
    | Mm_GenLoc_db =
    | Mm_GenLoc_chr = 4
    | Mm_GenLoc_start = 49653166
    | Mm_GenLoc_end = 49677987
    | Mm_Uniprot = Q5DTM8
  }}
}}
'''Ring finger protein 20''', also known as '''RNF20''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: RNF20 ring finger protein 20| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=56254| accessdate = }}</ref>


<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{PBB_Summary
{{PBB_Summary
| section_title =  
| section_title =  
| summary_text = The protein encoded by this gene shares similarity with BRE1 of S. cerevisiae. Yeast BRE1 is a ubiquitin ligase required for the ubiquitination of histone H2B and the methylation of histone H3.<ref name="entrez">{{cite web | title = Entrez Gene: RNF20 ring finger protein 20| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=56254| accessdate = }}</ref>
| summary_text = The protein encoded by this gene shares similarity with BRE1 of S. cerevisiae. Yeast BRE1 is a ubiquitin ligase required for the ubiquitination of histone H2B and the methylation of histone H3.<ref name="entrez">{{cite web | title = Entrez Gene: RNF20 ring finger protein 20| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=56254| accessdate = }}</ref>
}}
}}


Line 58: Line 12:


==References==
==References==
{{reflist|2}}
{{reflist}}


==Further reading==
==Further reading==
Line 64: Line 18:
{{PBB_Further_reading  
{{PBB_Further_reading  
| citations =  
| citations =  
*{{cite journal | author=Lossos IS, Alizadeh AA, Eisen MB, ''et al.'' |title=Ongoing immunoglobulin somatic mutation in germinal center B cell-like but not in activated B cell-like diffuse large cell lymphomas. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=97 |issue= 18 |pages= 10209-13 |year= 2000 |pmid= 10954754 |doi= 10.1073/pnas.180316097 }}
*{{cite journal   |vauthors=Lossos IS, Alizadeh AA, Eisen MB, etal |title=Ongoing immunoglobulin somatic mutation in germinal center B cell-like but not in activated B cell-like diffuse large cell lymphomas. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=97 |issue= 18 |pages= 10209–13 |year= 2000 |pmid= 10954754 |doi= 10.1073/pnas.180316097 | pmc=27813 }}
*{{cite journal | author=Slachta CA, Jeevanandam V, Goldman B, ''et al.'' |title=Coronary arteries from human cardiac allografts with chronic rejection contain oligoclonal T cells: persistence of identical clonally expanded TCR transcripts from the early post-transplantation period (endomyocardial biopsies) to chronic rejection (coronary arteries). |journal=J. Immunol. |volume=165 |issue= 6 |pages= 3469-83 |year= 2000 |pmid= 10975868 |doi=  }}
*{{cite journal   |vauthors=Slachta CA, Jeevanandam V, Goldman B, etal |title=Coronary arteries from human cardiac allografts with chronic rejection contain oligoclonal T cells: persistence of identical clonally expanded TCR transcripts from the early post-transplantation period (endomyocardial biopsies) to chronic rejection (coronary arteries). |journal=J. Immunol. |volume=165 |issue= 6 |pages= 3469–83 |year= 2000 |pmid= 10975868 |doi=  10.4049/jimmunol.165.6.3469}}
*{{cite journal  | author=Lee J, Monson NL, Lipsky PE |title=The V lambda J lambda repertoire in human fetal spleen: evidence for positive selection and extensive receptor editing. |journal=J. Immunol. |volume=165 |issue= 11 |pages= 6322-33 |year= 2001 |pmid= 11086069 |doi=  }}
*{{cite journal  | vauthors=Lee J, Monson NL, Lipsky PE |title=The V lambda J lambda repertoire in human fetal spleen: evidence for positive selection and extensive receptor editing. |journal=J. Immunol. |volume=165 |issue= 11 |pages= 6322–33 |year= 2001 |pmid= 11086069 |doi=  10.4049/jimmunol.165.11.6322}}
*{{cite journal | author=Rowley AH, Shulman ST, Spike BT, ''et al.'' |title=Oligoclonal IgA response in the vascular wall in acute Kawasaki disease. |journal=J. Immunol. |volume=166 |issue= 2 |pages= 1334-43 |year= 2001 |pmid= 11145718 |doi=  }}
*{{cite journal   |vauthors=Rowley AH, Shulman ST, Spike BT, etal |title=Oligoclonal IgA response in the vascular wall in acute Kawasaki disease. |journal=J. Immunol. |volume=166 |issue= 2 |pages= 1334–43 |year= 2001 |pmid= 11145718 |doi=  10.4049/jimmunol.166.2.1334}}
*{{cite journal | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{cite journal   |vauthors=Strausberg RL, Feingold EA, Grouse LH, etal |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 | pmc=139241 }}
*{{cite journal | author=Hwang WW, Venkatasubrahmanyam S, Ianculescu AG, ''et al.'' |title=A conserved RING finger protein required for histone H2B monoubiquitination and cell size control. |journal=Mol. Cell |volume=11 |issue= 1 |pages= 261-6 |year= 2003 |pmid= 12535538 |doi=  }}
*{{cite journal   |vauthors=Hwang WW, Venkatasubrahmanyam S, Ianculescu AG, etal |title=A conserved RING finger protein required for histone H2B monoubiquitination and cell size control. |journal=Mol. Cell |volume=11 |issue= 1 |pages= 261–6 |year= 2003 |pmid= 12535538 |doi=10.1016/S1097-2765(02)00826-2 }}
*{{cite journal | author=Wood A, Krogan NJ, Dover J, ''et al.'' |title=Bre1, an E3 ubiquitin ligase required for recruitment and substrate selection of Rad6 at a promoter. |journal=Mol. Cell |volume=11 |issue= 1 |pages= 267-74 |year= 2003 |pmid= 12535539 |doi= }}
*{{cite journal   |vauthors=Wood A, Krogan NJ, Dover J, etal |title=Bre1, an E3 ubiquitin ligase required for recruitment and substrate selection of Rad6 at a promoter. |journal=Mol. Cell |volume=11 |issue= 1 |pages= 267–74 |year= 2003 |pmid= 12535539 |doi=10.1016/S1097-2765(02)00802-}}
*{{cite journal  | author=Wood A, Schneider J, Dover J, ''et al.'' |title=The Paf1 complex is essential for histone monoubiquitination by the Rad6-Bre1 complex, which signals for histone methylation by COMPASS and Dot1p. |journal=J. Biol. Chem. |volume=278 |issue= 37 |pages= 34739-42 |year= 2003 |pmid= 12876294 |doi= 10.1074/jbc.C300269200 }}
*{{cite journal   |vauthors=Ota T, Suzuki Y, Nishikawa T, etal |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40–5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
*{{cite journal | author=Ota T, Suzuki Y, Nishikawa T, ''et al.'' |title=Complete sequencing and characterization of 21,243 full-length human cDNAs. |journal=Nat. Genet. |volume=36 |issue= 1 |pages= 40-5 |year= 2004 |pmid= 14702039 |doi= 10.1038/ng1285 }}
*{{cite journal   |vauthors=Humphray SJ, Oliver K, Hunt AR, etal |title=DNA sequence and analysis of human chromosome 9. |journal=Nature |volume=429 |issue= 6990 |pages= 369–74 |year= 2004 |pmid= 15164053 |doi= 10.1038/nature02465 | pmc=2734081 }}
*{{cite journal | author=Humphray SJ, Oliver K, Hunt AR, ''et al.'' |title=DNA sequence and analysis of human chromosome 9. |journal=Nature |volume=429 |issue= 6990 |pages= 369-74 |year= 2004 |pmid= 15164053 |doi= 10.1038/nature02465 }}
*{{cite journal   |vauthors=Beausoleil SA, Jedrychowski M, Schwartz D, etal |title=Large-scale characterization of HeLa cell nuclear phosphoproteins. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=101 |issue= 33 |pages= 12130–5 |year= 2004 |pmid= 15302935 |doi= 10.1073/pnas.0404720101 | pmc=514446 }}
*{{cite journal | author=Beausoleil SA, Jedrychowski M, Schwartz D, ''et al.'' |title=Large-scale characterization of HeLa cell nuclear phosphoproteins. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=101 |issue= 33 |pages= 12130-5 |year= 2004 |pmid= 15302935 |doi= 10.1073/pnas.0404720101 }}
*{{cite journal   |vauthors=Gerhard DS, Wagner L, Feingold EA, etal |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 | pmc=528928 }}
*{{cite journal | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
*{{cite journal   |vauthors=Andersen JS, Lam YW, Leung AK, etal |title=Nucleolar proteome dynamics. |journal=Nature |volume=433 |issue= 7021 |pages= 77–83 |year= 2005 |pmid= 15635413 |doi= 10.1038/nature03207 }}
*{{cite journal | author=Andersen JS, Lam YW, Leung AK, ''et al.'' |title=Nucleolar proteome dynamics. |journal=Nature |volume=433 |issue= 7021 |pages= 77-83 |year= 2005 |pmid= 15635413 |doi= 10.1038/nature03207 }}
*{{cite journal   |vauthors=Zhu B, Zheng Y, Pham AD, etal |title=Monoubiquitination of human histone H2B: the factors involved and their roles in HOX gene regulation. |journal=Mol. Cell |volume=20 |issue= 4 |pages= 601–11 |year= 2006 |pmid= 16307923 |doi= 10.1016/j.molcel.2005.09.025 }}
*{{cite journal | author=Zhu B, Zheng Y, Pham AD, ''et al.'' |title=Monoubiquitination of human histone H2B: the factors involved and their roles in HOX gene regulation. |journal=Mol. Cell |volume=20 |issue= 4 |pages= 601-11 |year= 2006 |pmid= 16307923 |doi= 10.1016/j.molcel.2005.09.025 }}
*{{cite journal  | author=Kim J, Hake SB, Roeder RG |title=The human homolog of yeast BRE1 functions as a transcriptional coactivator through direct activator interactions. |journal=Mol. Cell |volume=20 |issue= 5 |pages= 759-70 |year= 2006 |pmid= 16337599 |doi= 10.1016/j.molcel.2005.11.012 }}
}}
}}
{{refend}}
{{refend}}
Line 85: Line 37:
* {{MeshName|RNF20+protein,+human}}
* {{MeshName|RNF20+protein,+human}}


{{protein-stub}}
<!-- The PBB_Controls template provides controls for Protein Box Bot, please see Template:PBB_Controls for details. -->
{{WikiDoc Sources}}
{{PBB_Controls
| update_page = yes
| require_manual_inspection = no
| update_protein_box = yes
| update_summary = yes
| update_citations = yes
}}
 
[[Category:RING finger proteins]]
 
 
{{gene-9-stub}}

Latest revision as of 09:21, 10 September 2017

VALUE_ERROR (nil)
Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

n/a

n/a

RefSeq (protein)

n/a

n/a

Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

E3 ubiquitin-protein ligase BRE1A is an enzyme that in humans is encoded by the RNF20 gene.[1][2][3][4][5]

The protein encoded by this gene shares similarity with BRE1 of S. cerevisiae. Yeast BRE1 is a ubiquitin ligase required for the ubiquitination of histone H2B and the methylation of histone H3.[5]

See also

References

  1. Kim J, Hake SB, Roeder RG (Dec 2005). "The human homolog of yeast BRE1 functions as a transcriptional coactivator through direct activator interactions". Mol Cell. 20 (5): 759–70. doi:10.1016/j.molcel.2005.11.012. PMID 16337599.
  2. Wood A, Schneider J, Dover J, Johnston M, Shilatifard A (Sep 2003). "The Paf1 complex is essential for histone monoubiquitination by the Rad6-Bre1 complex, which signals for histone methylation by COMPASS and Dot1p". J Biol Chem. 278 (37): 34739–42. doi:10.1074/jbc.C300269200. PMID 12876294.
  3. Shema E, Tirosh I, Aylon Y, Huang J, Ye C, Moskovits N, Raver-Shapira N, Minsky N, Pirngruber J, Tarcic G, Hublarova P, Moyal L, Gana-Weisz M, Shiloh Y, Yarden Y, Johnsen SA, Vojtesek B, Berger SL, Oren M (Oct 2008). "The histone H2B-specific ubiquitin ligase RNF20/hBRE1 acts as a putative tumor suppressor through selective regulation of gene expression". Genes Dev. 22 (19): 2664–76. doi:10.1101/gad.1703008. PMC 2559905. PMID 18832071.
  4. Liu Z, Oh SM, Okada M, Liu X, Cheng D, Peng J, Brat DJ, Sun SY, Zhou W, Gu W, Ye K (Feb 2009). "Human BRE1 is an E3 ubiquitin ligase for Ebp1 tumor suppressor". Mol Biol Cell. 20 (3): 757–68. doi:10.1091/mbc.E08-09-0983. PMC 2633391. PMID 19037095.
  5. 5.0 5.1 "Entrez Gene: RNF20 ring finger protein 20".

Further reading

External links