CSDC2: Difference between revisions

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{{Infobox_gene}}
{{GNF_Protein_box
'''Cold shock domain-containing protein C2''' is a [[protein]] that in humans is encoded by the ''CSDC2'' [[gene]].<ref name="pmid8573167">{{cite journal | vauthors = Castiglia D, Scaturro M, Nastasi T, Cestelli A, Di Liegro I | title = PIPPin, a putative RNA-binding protein specifically expressed in the rat brain | journal = Biochem Biophys Res Commun | volume = 218 | issue = 1 | pages = 390–4 |date=Mar 1996 | pmid = 8573167 | pmc =  | doi = 10.1006/bbrc.1996.0068 }}</ref><ref name="pmid12767259">{{cite journal | vauthors = Raimondi L, D'Asaro M, Proia P, Nastasi T, Di Liegro I | title = RNA-binding ability of PIPPin requires the entire protein | journal = J Cell Mol Med | volume = 7 | issue = 1 | pages = 35–42 |date=May 2003 | pmid = 12767259 | pmc = | doi =10.1111/j.1582-4934.2003.tb00200.x }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: CSDC2 cold shock domain containing C2, RNA binding| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=27254| accessdate = }}</ref>
| image = 
| image_source = 
| PDB =
| Name = Cold shock domain containing C2, RNA binding
| HGNCid = 30359
| Symbol = CSDC2
| AltSymbols =; PIPPIN; dJ347H13.2
| OMIM = 
| ECnumber = 
| Homologene = 8701
| MGIid = 2146027
| GeneAtlas_image1 = PBB_GE_CSDC2_209981_at_tn.png
| Function = {{GNF_GO|id=GO:0003677 |text = DNA binding}} {{GNF_GO|id=GO:0003723 |text = RNA binding}}
| Component = {{GNF_GO|id=GO:0005634 |text = nucleus}} {{GNF_GO|id=GO:0005737 |text = cytoplasm}}
  | Process = {{GNF_GO|id=GO:0006355 |text = regulation of transcription, DNA-dependent}} {{GNF_GO|id=GO:0006397 |text = mRNA processing}} {{GNF_GO|id=GO:0006398 |text = histone mRNA 3'-end processing}}
| Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 27254
    | Hs_Ensembl = ENSG00000172346
    | Hs_RefseqProtein = NP_055275
    | Hs_RefseqmRNA = NM_014460
    | Hs_GenLoc_db =
    | Hs_GenLoc_chr = 22
    | Hs_GenLoc_start = 40286997
    | Hs_GenLoc_end = 40302610
    | Hs_Uniprot = Q9Y534
    | Mm_EntrezGene = 105859
    | Mm_Ensembl = ENSMUSG00000042109
    | Mm_RefseqmRNA = NM_145473
    | Mm_RefseqProtein = NP_663448
    | Mm_GenLoc_db =   
    | Mm_GenLoc_chr = 15
    | Mm_GenLoc_start = 81764150
    | Mm_GenLoc_end = 81778183
    | Mm_Uniprot = Q3V1F0
  }}
}}
'''Cold shock domain containing C2, RNA binding''', also known as '''CSDC2''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: CSDC2 cold shock domain containing C2, RNA binding| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=27254| accessdate = }}</ref>


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==References==
==References==
{{reflist|2}}
{{reflist}}
 
==External links==
* {{UCSC gene info|CSDC2}}
 
==Further reading==
==Further reading==
{{refbegin | 2}}
{{refbegin | 2}}
{{PBB_Further_reading  
{{PBB_Further_reading  
| citations =  
| citations =  
*{{cite journal  | author=Castiglia D, Scaturro M, Nastasi T, ''et al.'' |title=PIPPin, a putative RNA-binding protein specifically expressed in the rat brain. |journal=Biochem. Biophys. Res. Commun. |volume=218 |issue= 1 |pages= 390-4 |year= 1996 |pmid= 8573167 |doi= 10.1006/bbrc.1996.0068 }}
*{{cite journal  | vauthors=Andersson B, Wentland MA, Ricafrente JY |title=A "double adaptor" method for improved shotgun library construction. |journal=Anal. Biochem. |volume=236 |issue= 1 |pages= 107–13 |year= 1996 |pmid= 8619474 |doi= 10.1006/abio.1996.0138 |display-authors=etal}}
*{{cite journal  | author=Andersson B, Wentland MA, Ricafrente JY, ''et al.'' |title=A "double adaptor" method for improved shotgun library construction. |journal=Anal. Biochem. |volume=236 |issue= 1 |pages= 107-13 |year= 1996 |pmid= 8619474 |doi= 10.1006/abio.1996.0138 }}
*{{cite journal  | vauthors=Yu W, Andersson B, Worley KC |title=Large-scale concatenation cDNA sequencing. |journal=Genome Res. |volume=7 |issue= 4 |pages= 353–8 |year= 1997 |pmid= 9110174 |doi=  10.1101/gr.7.4.353| pmc=139146  |display-authors=etal}}
*{{cite journal  | author=Yu W, Andersson B, Worley KC, ''et al.'' |title=Large-scale concatenation cDNA sequencing. |journal=Genome Res. |volume=7 |issue= 4 |pages= 353-8 |year= 1997 |pmid= 9110174 |doi=  }}
*{{cite journal  | vauthors=Nastasi T, Scaturro M, Bellafiore M |title=PIPPin is a brain-specific protein that contains a cold-shock domain and binds specifically to H1 degrees and H3.3 mRNAs. |journal=J. Biol. Chem. |volume=274 |issue= 34 |pages= 24087–93 |year= 1999 |pmid= 10446180 |doi=10.1074/jbc.274.34.24087 |display-authors=etal}}
*{{cite journal  | author=Nastasi T, Scaturro M, Bellafiore M, ''et al.'' |title=PIPPin is a brain-specific protein that contains a cold-shock domain and binds specifically to H1 degrees and H3.3 mRNAs. |journal=J. Biol. Chem. |volume=274 |issue= 34 |pages= 24087-93 |year= 1999 |pmid= 10446180 |doi=  }}
*{{cite journal  | vauthors=Dunham I, Shimizu N, Roe BA |title=The DNA sequence of human chromosome 22. |journal=Nature |volume=402 |issue= 6761 |pages= 489–95 |year= 1999 |pmid= 10591208 |doi= 10.1038/990031 |display-authors=etal}}
*{{cite journal  | author=Dunham I, Shimizu N, Roe BA, ''et al.'' |title=The DNA sequence of human chromosome 22. |journal=Nature |volume=402 |issue= 6761 |pages= 489-95 |year= 1999 |pmid= 10591208 |doi= 10.1038/990031 }}
*{{cite journal  | vauthors=Nastasi T, Muzi P, Beccari S |title=Specific neurons of brain cortex and cerebellum are PIPPin positive. |journal=NeuroReport |volume=11 |issue= 10 |pages= 2233–6 |year= 2001 |pmid= 10923677 |doi=10.1097/00001756-200007140-00034 |display-authors=etal}}
*{{cite journal  | author=Nastasi T, Muzi P, Beccari S, ''et al.'' |title=Specific neurons of brain cortex and cerebellum are PIPPin positive. |journal=Neuroreport |volume=11 |issue= 10 |pages= 2233-6 |year= 2001 |pmid= 10923677 |doi=  }}
*{{cite journal  | vauthors=Strausberg RL, Feingold EA, Grouse LH |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 |display-authors=etal}}
*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{cite journal  | vauthors=Schäfer C, Steffen H, Krzykowski KJ |title=CRHSP-24 phosphorylation is regulated by multiple signaling pathways in pancreatic acinar cells. |journal=Am. J. Physiol. Gastrointest. Liver Physiol. |volume=285 |issue= 4 |pages= G726–34 |year= 2003 |pmid= 12801884 |doi= 10.1152/ajpgi.00111.2003 |display-authors=etal}}
*{{cite journal | author=Raimondi L, D'Asaro M, Proia P, ''et al.'' |title=RNA-binding ability of PIPPin requires the entire protein. |journal=J. Cell. Mol. Med. |volume=7 |issue= 1 |pages= 35-42 |year= 2003 |pmid= 12767259 |doi=  }}
*{{cite journal  | vauthors=Collins JE, Wright CL, Edwards CA |title=A genome annotation-driven approach to cloning the human ORFeome. |journal=Genome Biol. |volume=5 |issue= 10 |pages= R84 |year= 2005 |pmid= 15461802 |doi= 10.1186/gb-2004-5-10-r84 | pmc=545604 |display-authors=etal}}
*{{cite journal  | author=Schäfer C, Steffen H, Krzykowski KJ, ''et al.'' |title=CRHSP-24 phosphorylation is regulated by multiple signaling pathways in pancreatic acinar cells. |journal=Am. J. Physiol. Gastrointest. Liver Physiol. |volume=285 |issue= 4 |pages= G726-34 |year= 2003 |pmid= 12801884 |doi= 10.1152/ajpgi.00111.2003 }}
*{{cite journal  | vauthors=Gerhard DS, Wagner L, Feingold EA |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121–7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 | pmc=528928 |display-authors=etal}}
*{{cite journal  | author=Collins JE, Wright CL, Edwards CA, ''et al.'' |title=A genome annotation-driven approach to cloning the human ORFeome. |journal=Genome Biol. |volume=5 |issue= 10 |pages= R84 |year= 2005 |pmid= 15461802 |doi= 10.1186/gb-2004-5-10-r84 }}
*{{cite journal  | vauthors=Kimura K, Wakamatsu A, Suzuki Y |title=Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. |journal=Genome Res. |volume=16 |issue= 1 |pages= 55–65 |year= 2006 |pmid= 16344560 |doi= 10.1101/gr.4039406 | pmc=1356129 |display-authors=etal}}
*{{cite journal  | author=Gerhard DS, Wagner L, Feingold EA, ''et al.'' |title=The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |journal=Genome Res. |volume=14 |issue= 10B |pages= 2121-7 |year= 2004 |pmid= 15489334 |doi= 10.1101/gr.2596504 }}
*{{cite journal  | author=Kimura K, Wakamatsu A, Suzuki Y, ''et al.'' |title=Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. |journal=Genome Res. |volume=16 |issue= 1 |pages= 55-65 |year= 2006 |pmid= 16344560 |doi= 10.1101/gr.4039406 }}
}}
}}
{{refend}}
{{refend}}
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{{gene-22-stub}}
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Latest revision as of 10:05, 30 August 2017

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Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez

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Ensembl

n/a

n/a

UniProt

n/a

n/a

RefSeq (mRNA)

n/a

n/a

RefSeq (protein)

n/a

n/a

Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

Cold shock domain-containing protein C2 is a protein that in humans is encoded by the CSDC2 gene.[1][2][3]


References

  1. ↑ Castiglia D, Scaturro M, Nastasi T, Cestelli A, Di Liegro I (Mar 1996). "PIPPin, a putative RNA-binding protein specifically expressed in the rat brain". Biochem Biophys Res Commun. 218 (1): 390–4. doi:10.1006/bbrc.1996.0068. PMID 8573167.
  2. ↑ Raimondi L, D'Asaro M, Proia P, Nastasi T, Di Liegro I (May 2003). "RNA-binding ability of PIPPin requires the entire protein". J Cell Mol Med. 7 (1): 35–42. doi:10.1111/j.1582-4934.2003.tb00200.x. PMID 12767259.
  3. ↑ "Entrez Gene: CSDC2 cold shock domain containing C2, RNA binding".

External links

Further reading



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