ARHGEF6: Difference between revisions

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{{Infobox_gene}}
{{PBB_Controls
'''Rho guanine nucleotide exchange factor 6''' is a [[protein]] that, in humans, is encoded by the ''ARHGEF6'' [[gene]].<ref name="pmid7584048">{{cite journal | vauthors = Nomura N, Nagase T, Miyajima N, Sazuka T, Tanaka A, Sato S, Seki N, Kawarabayasi Y, Ishikawa K, Tabata S | title = Prediction of the coding sequences of unidentified human genes. II. The coding sequences of 40 new genes (KIAA0041-KIAA0080) deduced by analysis of cDNA clones from human cell line KG-1 (supplement) | journal = DNA Res | volume = 1 | issue = 5 | pages = 251–62 |date=Dec 1995 | pmid = 7584048 | pmc =  | doi =10.1093/dnares/1.5.251 }}</ref><ref name="pmid9659915">{{cite journal | vauthors = Manser E, Loo TH, Koh CG, Zhao ZS, Chen XQ, Tan L, Tan I, Leung T, Lim L | title = PAK kinases are directly coupled to the PIX family of nucleotide exchange factors | journal = Mol Cell | volume = 1 | issue = 2 | pages = 183–92 |date=Jul 1998 | pmid = 9659915 | pmc =  | doi =10.1016/S1097-2765(00)80019-2 }}</ref><ref name="entrez">{{cite web | title = Entrez Gene: ARHGEF6 Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6| url = https://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=9459| accessdate = }}</ref>
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<!-- The GNF_Protein_box is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
{{GNF_Protein_box
| image = PBB_Protein_ARHGEF6_image.jpg
| image_source = [[Protein_Data_Bank|PDB]] rendering based on 1ujy.
| PDB = {{PDB2|1ujy}}, {{PDB2|1wyr}}
| Name = Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
| HGNCid = 685
| Symbol = ARHGEF6
| AltSymbols =; COOL2; Cool-2; KIAA0006; MRX46; PIXA; alpha-PIX; alphaPIX
| OMIM = 300267
| ECnumber =
| Homologene = 3561
| MGIid = 1920591
  | GeneAtlas_image1 = PBB_GE_ARHGEF6_209539_at_tn.png
  | Function = {{GNF_GO|id=GO:0005085 |text = guanyl-nucleotide exchange factor activity}} {{GNF_GO|id=GO:0005089 |text = Rho guanyl-nucleotide exchange factor activity}} {{GNF_GO|id=GO:0005096 |text = GTPase activator activity}}
| Component = {{GNF_GO|id=GO:0005622 |text = intracellular}}
| Process = {{GNF_GO|id=GO:0006915 |text = apoptosis}} {{GNF_GO|id=GO:0007254 |text = JNK cascade}} {{GNF_GO|id=GO:0035023 |text = regulation of Rho protein signal transduction}}
  | Orthologs = {{GNF_Ortholog_box
    | Hs_EntrezGene = 9459
    | Hs_Ensembl = ENSG00000129675
    | Hs_RefseqProtein = NP_004831
    | Hs_RefseqmRNA = NM_004840
    | Hs_GenLoc_db = 
    | Hs_GenLoc_chr = X
    | Hs_GenLoc_start = 135575372
    | Hs_GenLoc_end = 135691913
    | Hs_Uniprot = Q15052
    | Mm_EntrezGene = 73341
    | Mm_Ensembl = ENSMUSG00000031133
    | Mm_RefseqmRNA = NM_152801
    | Mm_RefseqProtein = NP_690014
    | Mm_GenLoc_db =   
    | Mm_GenLoc_chr = X
    | Mm_GenLoc_start = 53578271
    | Mm_GenLoc_end = 53685513
    | Mm_Uniprot = Q8K4I3
  }}
}}
'''Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6''', also known as '''ARHGEF6''', is a human [[gene]].<ref name="entrez">{{cite web | title = Entrez Gene: ARHGEF6 Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=9459| accessdate = }}</ref>


<!-- The PBB_Summary template is automatically maintained by Protein Box Bot.  See Template:PBB_Controls to Stop updates. -->
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{{PBB_Summary
{{PBB_Summary
| section_title =  
| section_title =  
| summary_text = Rho GTPases play a fundamental role in numerous cellular processes that are initiated by extracellular stimuli that work through G protein coupled receptors. The encoded protein belongs to a family of cytoplasmic proteins that activate the Ras-like family of Rho proteins by exchanging bound GDP for GTP. It may form a complex with G proteins and stimulate Rho-dependent signals. This protein is activated by PI3-kinase. Mutations in this gene can cause X-chromosomal non-specific mental retardation.<ref name="entrez">{{cite web | title = Entrez Gene: ARHGEF6 Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6| url = http://www.ncbi.nlm.nih.gov/sites/entrez?Db=gene&Cmd=ShowDetailView&TermToSearch=9459| accessdate = }}</ref>
| summary_text = Rho GTPases play a fundamental role in numerous cellular processes that are initiated by extracellular stimuli that work through G protein-coupled receptors. The encoded protein belongs to a family of cytoplasmic proteins that catalyse the exchange of GDP for GTP in some Rho-family small GTPases. It may form a complex with G proteins and stimulate Rho-dependent signals. This protein is activated by PI3-kinase. Mutations in this gene can cause X-chromosomal non-specific mental retardation.<ref name="entrez"/>
}}
}}


==References==
==References==
{{reflist|2}}
{{reflist}}
 
==External links==
* {{UCSC gene info|ARHGEF6}}
 
==Further reading==
==Further reading==
{{refbegin | 2}}
{{refbegin | 2}}
{{PBB_Further_reading  
{{PBB_Further_reading  
| citations =  
| citations =  
*{{cite journal  | author=Nomura N, Miyajima N, Sazuka T, ''et al.'' |title=Prediction of the coding sequences of unidentified human genes. I. The coding sequences of 40 new genes (KIAA0001-KIAA0040) deduced by analysis of randomly sampled cDNA clones from human immature myeloid cell line KG-1. |journal=DNA Res. |volume=1 |issue= 1 |pages= 27-35 |year= 1995 |pmid= 7584026 |doi=  }}
*{{cite journal  | vauthors=Nomura N, Miyajima N, Sazuka T |title=Prediction of the coding sequences of unidentified human genes. I. The coding sequences of 40 new genes (KIAA0001-KIAA0040) deduced by analysis of randomly sampled cDNA clones from human immature myeloid cell line KG-1. |journal=DNA Res. |volume=1 |issue= 1 |pages= 27–35 |year= 1995 |pmid= 7584026 |doi=10.1093/dnares/1.1.27 |display-authors=etal}}
*{{cite journal  | author=Nomura N, Miyajima N, Sazuka T, ''et al.'' |title=Prediction of the coding sequences of unidentified human genes. I. The coding sequences of 40 new genes (KIAA0001-KIAA0040) deduced by analysis of randomly sampled cDNA clones from human immature myeloid cell line KG-1 (supplement). |journal=DNA Res. |volume=1 |issue= 1 |pages= 47-56 |year= 1995 |pmid= 7584028 |doi= }}
*{{cite journal  | vauthors=Nomura N, Miyajima N, Sazuka T |title=Prediction of the coding sequences of unidentified human genes. I. The coding sequences of 40 new genes (KIAA0001-KIAA0040) deduced by analysis of randomly sampled cDNA clones from human immature myeloid cell line KG-1 (supplement). |journal=DNA Res. |volume=1 |issue= 1 |pages= 47–56 |year= 1995 |pmid= 7584028 |doi=10.1093/dnares/1.1.47  |display-authors=etal}}
*{{cite journal  | author=Nomura N, Nagase T, Miyajima N, ''et al.'' |title=Prediction of the coding sequences of unidentified human genes. II. The coding sequences of 40 new genes (KIAA0041-KIAA0080) deduced by analysis of cDNA clones from human cell line KG-1 (supplement). |journal=DNA Res. |volume=1 |issue= 5 |pages= 251-62 |year= 1995 |pmid= 7584048 |doi=  }}
*{{cite journal  | vauthors=Ebinu JO, Bottorff DA, Chan EY |title=RasGRP, a Ras guanyl nucleotide- releasing protein with calcium- and diacylglycerol-binding motifs. |journal=Science |volume=280 |issue= 5366 |pages= 1082–6 |year= 1998 |pmid= 9582122 |doi=10.1126/science.280.5366.1082 |display-authors=etal}}
*{{cite journal  | author=Ebinu JO, Bottorff DA, Chan EY, ''et al.'' |title=RasGRP, a Ras guanyl nucleotide- releasing protein with calcium- and diacylglycerol-binding motifs. |journal=Science |volume=280 |issue= 5366 |pages= 1082-6 |year= 1998 |pmid= 9582122 |doi= }}
*{{cite journal  | vauthors=Yntema HG, Hamel BC, Smits AP |title=Localisation of a gene for non-specific X linked mental retardation (MRX46) to Xq25-q26. |journal=J. Med. Genet. |volume=35 |issue= 10 |pages= 801–5 |year= 1999 |pmid= 9783701 |doi=10.1136/jmg.35.10.801  | pmc=1051453  |display-authors=etal}}
*{{cite journal  | author=Manser E, Loo TH, Koh CG, ''et al.'' |title=PAK kinases are directly coupled to the PIX family of nucleotide exchange factors. |journal=Mol. Cell |volume=1 |issue= 2 |pages= 183-92 |year= 1998 |pmid= 9659915 |doi= }}
*{{cite journal  | vauthors=Yoshii S, Tanaka M, Otsuki Y |title=alphaPIX nucleotide exchange factor is activated by interaction with phosphatidylinositol 3-kinase. |journal=Oncogene |volume=18 |issue= 41 |pages= 5680–90 |year= 1999 |pmid= 10523848 |doi= 10.1038/sj.onc.1202936 |display-authors=etal}}
*{{cite journal  | author=Yntema HG, Hamel BC, Smits AP, ''et al.'' |title=Localisation of a gene for non-specific X linked mental retardation (MRX46) to Xq25-q26. |journal=J. Med. Genet. |volume=35 |issue= 10 |pages= 801-5 |year= 1999 |pmid= 9783701 |doi=  }}
*{{cite journal  | vauthors=Brown A, Wang X, Sawai E, Cheng-Mayer C |title=Activation of the PAK-related kinase by human immunodeficiency virus type 1 Nef in primary human peripheral blood lymphocytes and macrophages leads to phosphorylation of a PIX-p95 complex. |journal=J. Virol. |volume=73 |issue= 12 |pages= 9899–907 |year= 1999 |pmid= 10559302 |doi= | pmc=113039 }}
*{{cite journal  | author=Yoshii S, Tanaka M, Otsuki Y, ''et al.'' |title=alphaPIX nucleotide exchange factor is activated by interaction with phosphatidylinositol 3-kinase. |journal=Oncogene |volume=18 |issue= 41 |pages= 5680-90 |year= 1999 |pmid= 10523848 |doi= 10.1038/sj.onc.1202936 }}
*{{cite journal  | vauthors=Premont RT, Claing A, Vitale N |title=The GIT family of ADP-ribosylation factor GTPase-activating proteins. Functional diversity of GIT2 through alternative splicing. |journal=J. Biol. Chem. |volume=275 |issue= 29 |pages= 22373–80 |year= 2000 |pmid= 10896954 |doi=10.1074/jbc.275.29.22373  |display-authors=etal}}
*{{cite journal  | author=Brown A, Wang X, Sawai E, Cheng-Mayer C |title=Activation of the PAK-related kinase by human immunodeficiency virus type 1 Nef in primary human peripheral blood lymphocytes and macrophages leads to phosphorylation of a PIX-p95 complex. |journal=J. Virol. |volume=73 |issue= 12 |pages= 9899-907 |year= 1999 |pmid= 10559302 |doi= }}
*{{cite journal  | vauthors=Kutsche K, Yntema H, Brandt A |title=Mutations in ARHGEF6, encoding a guanine nucleotide exchange factor for Rho GTPases, in patients with X-linked mental retardation. |journal=Nat. Genet. |volume=26 |issue= 2 |pages= 247–50 |year= 2000 |pmid= 11017088 |doi= 10.1038/80002 |display-authors=etal}}
*{{cite journal  | author=Premont RT, Claing A, Vitale N, ''et al.'' |title=The GIT family of ADP-ribosylation factor GTPase-activating proteins. Functional diversity of GIT2 through alternative splicing. |journal=J. Biol. Chem. |volume=275 |issue= 29 |pages= 22373-80 |year= 2000 |pmid= 10896954 |doi=  }}
*{{cite journal  | vauthors=Lower KM, Gecz J |title=Characterization of ARHGEF6, a guanine nucleotide exchange factor for Rho GTPases and a candidate gene for X-linked mental retardation: mutation screening in Börjeson-Forssman-Lehmann syndrome and MRX27. |journal=Am. J. Med. Genet. |volume=100 |issue= 1 |pages= 43–8 |year= 2001 |pmid= 11337747 |doi=10.1002/ajmg.1189 }}
*{{cite journal  | author=Kutsche K, Yntema H, Brandt A, ''et al.'' |title=Mutations in ARHGEF6, encoding a guanine nucleotide exchange factor for Rho GTPases, in patients with X-linked mental retardation. |journal=Nat. Genet. |volume=26 |issue= 2 |pages= 247-50 |year= 2000 |pmid= 11017088 |doi= 10.1038/80002 }}
*{{cite journal  | vauthors=Yoshii S, Tanaka M, Otsuki Y |title=Involvement of alpha-PAK-interacting exchange factor in the PAK1-c-Jun NH(2)-terminal kinase 1 activation and apoptosis induced by benzo[a]pyrene. |journal=Mol. Cell. Biol. |volume=21 |issue= 20 |pages= 6796–807 |year= 2001 |pmid= 11564864 |doi= 10.1128/MCB.21.20.6796-6807.2001  | pmc=99857 |display-authors=etal}}
*{{cite journal  | author=Lower KM, Gecz J |title=Characterization of ARHGEF6, a guanine nucleotide exchange factor for Rho GTPases and a candidate gene for X-linked mental retardation: mutation screening in Börjeson-Forssman-Lehmann syndrome and MRX27. |journal=Am. J. Med. Genet. |volume=100 |issue= 1 |pages= 43-8 |year= 2001 |pmid= 11337747 |doi=  }}
*{{cite journal  | vauthors=Vikis HG, Li W, Guan KL |title=The plexin-B1/Rac interaction inhibits PAK activation and enhances Sema4D ligand binding. |journal=Genes Dev. |volume=16 |issue= 7 |pages= 836–45 |year= 2002 |pmid= 11937491 |doi= 10.1101/gad.966402 | pmc=186329 }}
*{{cite journal  | author=Yoshii S, Tanaka M, Otsuki Y, ''et al.'' |title=Involvement of alpha-PAK-interacting exchange factor in the PAK1-c-Jun NH(2)-terminal kinase 1 activation and apoptosis induced by benzo[a]pyrene. |journal=Mol. Cell. Biol. |volume=21 |issue= 20 |pages= 6796-807 |year= 2001 |pmid= 11564864 |doi= 10.1128/MCB.21.20.6796-6807.2001 }}
*{{cite journal  | vauthors=Strausberg RL, Feingold EA, Grouse LH |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899–903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899  | pmc=139241 |display-authors=etal}}
*{{cite journal  | author=Vikis HG, Li W, Guan KL |title=The plexin-B1/Rac interaction inhibits PAK activation and enhances Sema4D ligand binding. |journal=Genes Dev. |volume=16 |issue= 7 |pages= 836-45 |year= 2002 |pmid= 11937491 |doi= 10.1101/gad.966402 }}
*{{cite journal  | vauthors=Rosenberger G, Jantke I, Gal A, Kutsche K |title=Interaction of alphaPIX (ARHGEF6) with beta-parvin (PARVB) suggests an involvement of alphaPIX in integrin-mediated signaling. |journal=Hum. Mol. Genet. |volume=12 |issue= 2 |pages= 155–67 |year= 2003 |pmid= 12499396 |doi=10.1093/hmg/ddg019  }}
*{{cite journal  | author=Strausberg RL, Feingold EA, Grouse LH, ''et al.'' |title=Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=99 |issue= 26 |pages= 16899-903 |year= 2003 |pmid= 12477932 |doi= 10.1073/pnas.242603899 }}
*{{cite journal  | vauthors=Flanders JA, Feng Q, Bagrodia S |title=The Cbl proteins are binding partners for the Cool/Pix family of p21-activated kinase-binding proteins. |journal=FEBS Lett. |volume=550 |issue= 1–3 |pages= 119–23 |year= 2003 |pmid= 12935897 |doi=10.1016/S0014-5793(03)00853-6  |display-authors=etal}}
*{{cite journal  | author=Rosenberger G, Jantke I, Gal A, Kutsche K |title=Interaction of alphaPIX (ARHGEF6) with beta-parvin (PARVB) suggests an involvement of alphaPIX in integrin-mediated signaling. |journal=Hum. Mol. Genet. |volume=12 |issue= 2 |pages= 155-67 |year= 2003 |pmid= 12499396 |doi= }}
*{{cite journal  | vauthors=Brill LM, Salomon AR, Ficarro SB |title=Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry |journal=Anal. Chem. |volume=76 |issue= 10 |pages= 2763–72 |year= 2004 |pmid= 15144186 |doi= 10.1021/ac035352d |display-authors=etal}}
*{{cite journal  | author=Flanders JA, Feng Q, Bagrodia S, ''et al.'' |title=The Cbl proteins are binding partners for the Cool/Pix family of p21-activated kinase-binding proteins. |journal=FEBS Lett. |volume=550 |issue= 1-3 |pages= 119-23 |year= 2003 |pmid= 12935897 |doi= }}
*{{cite journal  | vauthors=Djordjevic T, Hess J, Herkert O |title=Rac regulates thrombin-induced tissue factor expression in pulmonary artery smooth muscle cells involving the nuclear factor-kappaB pathway |journal=Antioxid. Redox Signal. |volume=6 |issue= 4 |pages= 713–20 |year= 2005 |pmid= 15242552 |doi= 10.1089/1523086041361703 |display-authors=etal}}
*{{cite journal  | author=Brill LM, Salomon AR, Ficarro SB, ''et al.'' |title=Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry. |journal=Anal. Chem. |volume=76 |issue= 10 |pages= 2763-72 |year= 2004 |pmid= 15144186 |doi= 10.1021/ac035352d }}
*{{cite journal  | vauthors=Beausoleil SA, Jedrychowski M, Schwartz D |title=Large-scale characterization of HeLa cell nuclear phosphoproteins |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=101 |issue= 33 |pages= 12130–5 |year= 2004 |pmid= 15302935 |doi= 10.1073/pnas.0404720101  | pmc=514446 |display-authors=etal}}
*{{cite journal  | author=Djordjevic T, Hess J, Herkert O, ''et al.'' |title=Rac regulates thrombin-induced tissue factor expression in pulmonary artery smooth muscle cells involving the nuclear factor-kappaB pathway. |journal=Antioxid. Redox Signal. |volume=6 |issue= 4 |pages= 713-20 |year= 2005 |pmid= 15242552 |doi= 10.1089/1523086041361703 }}
*{{cite journal  | vauthors=Jin J, Smith FD, Stark C |title=Proteomic, functional, and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization |journal=Curr. Biol. |volume=14 |issue= 16 |pages= 1436–50 |year= 2004 |pmid= 15324660 |doi= 10.1016/j.cub.2004.07.051 |display-authors=etal}}
*{{cite journal  | author=Beausoleil SA, Jedrychowski M, Schwartz D, ''et al.'' |title=Large-scale characterization of HeLa cell nuclear phosphoproteins. |journal=Proc. Natl. Acad. Sci. U.S.A. |volume=101 |issue= 33 |pages= 12130-5 |year= 2004 |pmid= 15302935 |doi= 10.1073/pnas.0404720101 }}
*{{cite journal  | author=Jin J, Smith FD, Stark C, ''et al.'' |title=Proteomic, functional, and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization. |journal=Curr. Biol. |volume=14 |issue= 16 |pages= 1436-50 |year= 2004 |pmid= 15324660 |doi= 10.1016/j.cub.2004.07.051 }}
}}
}}
{{refend}}
{{refend}}
{{PDB Gallery|geneid=9459}}
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Revision as of 18:13, 29 August 2017

VALUE_ERROR (nil)
Identifiers
Aliases
External IDsGeneCards: [1]
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

n/a

n/a

RefSeq (protein)

n/a

n/a

Location (UCSC)n/an/a
PubMed searchn/an/a
Wikidata
View/Edit Human

Rho guanine nucleotide exchange factor 6 is a protein that, in humans, is encoded by the ARHGEF6 gene.[1][2][3]

Rho GTPases play a fundamental role in numerous cellular processes that are initiated by extracellular stimuli that work through G protein-coupled receptors. The encoded protein belongs to a family of cytoplasmic proteins that catalyse the exchange of GDP for GTP in some Rho-family small GTPases. It may form a complex with G proteins and stimulate Rho-dependent signals. This protein is activated by PI3-kinase. Mutations in this gene can cause X-chromosomal non-specific mental retardation.[3]

References

  1. Nomura N, Nagase T, Miyajima N, Sazuka T, Tanaka A, Sato S, Seki N, Kawarabayasi Y, Ishikawa K, Tabata S (Dec 1995). "Prediction of the coding sequences of unidentified human genes. II. The coding sequences of 40 new genes (KIAA0041-KIAA0080) deduced by analysis of cDNA clones from human cell line KG-1 (supplement)". DNA Res. 1 (5): 251–62. doi:10.1093/dnares/1.5.251. PMID 7584048.
  2. Manser E, Loo TH, Koh CG, Zhao ZS, Chen XQ, Tan L, Tan I, Leung T, Lim L (Jul 1998). "PAK kinases are directly coupled to the PIX family of nucleotide exchange factors". Mol Cell. 1 (2): 183–92. doi:10.1016/S1097-2765(00)80019-2. PMID 9659915.
  3. 3.0 3.1 "Entrez Gene: ARHGEF6 Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6".

External links

Further reading